Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013508 Sechium edule HOM05D000197 ORTHO05D000114 1.6e-100 369.4 183 100.0
CsaV3_5G031770 Cucumis sativus L. HOM05D000197 ORTHO05D000114 2.5e-16 89.7 129 45.0
MELO3C012016.2 Cucumis melo HOM05D000197 ORTHO05D000114 1.0e-14 84.3 129 42.6
Sed0020136 Sechium edule HOM05D000197 ORTHO05D000114 1.0e-14 84.3 93 52.7
ClCG05G025130 Citrullus lanatus HOM05D000197 ORTHO05D000114 6.7e-14 81.6 130 44.6
QL03p062127 Quercus lobata HOM05D000197 ORTHO05D000114 3.3e-13 79.3 133 41.4
Gohir.A03G141700 Gossypium hirsutum HOM05D000197 ORTHO05D000114 2.8e-12 76.3 127 42.5
Gohir.D02G164700 Gossypium hirsutum HOM05D000197 ORTHO05D000114 2.8e-12 76.3 127 42.5
Gorai.005G184600 Gossypium raimondii HOM05D000197 ORTHO05D000114 2.8e-12 76.3 127 42.5
Cfa009126 Carpinus fangiana HOM05D000197 ORTHO05D000114 4.8e-12 75.5 134 41.8
Haze_12156 Corylus avellana HOM05D000197 ORTHO05D000114 4.8e-12 75.5 134 41.8
ECA246G2358 Erigeron canadensis HOM05D000197 ORTHO05D000114 1.4e-11 73.9 133 38.3
Atru.chr11.1977 Acer truncatum HOM05D000197 ORTHO05D000114 1.8e-11 73.6 129 41.9
CANSAT01G0021 Cannabis sativa HOM05D000197 ORTHO05D000114 1.8e-11 73.6 90 45.6
arahy.Tifrunner.gnm1.ann1.MDNW8J Arachis hypogaea HOM05D000197 ORTHO05D000114 4.1e-11 72.4 116 38.8
FAN07G2092 Fragaria x ananassa HOM05D000197 ORTHO05D000114 4.1e-11 72.4 134 41.8
FAN17G2379 Fragaria x ananassa HOM05D000197 ORTHO05D000114 5.3e-11 72.0 134 41.0
FvH4_4g34890 Fragaria vesca HOM05D000197 ORTHO05D000114 6.9e-11 71.6 133 40.6
FAN12G1601 Fragaria x ananassa HOM05D000197 ORTHO05D000114 6.9e-11 71.6 133 40.6
Duzib248G0646 Durio zibethinus HOM05D000197 ORTHO05D000114 9.0e-11 71.2 127 40.9
Lj6C802G2 Lonicera japonica HOM05D000197 ORTHO05D000114 1.2e-10 70.9 127 36.2
Thecc.02G247500 Theobroma cacao HOM05D000197 ORTHO05D000114 1.2e-10 70.9 129 41.1
Cpa.g.sc258.3 Carica papaya HOM05D000197 ORTHO05D000114 1.5e-10 70.5 128 39.8
Duzib268G1105 Durio zibethinus HOM05D000197 ORTHO05D000114 1.5e-10 70.5 87 50.6
Nitab4.5_0001474g0070 Nicotiana tabacum HOM05D000197 ORTHO05D000114 2.0e-10 70.1 86 48.8
Gorai.002G161000 Gossypium raimondii HOM05D000197 ORTHO05D000114 2.6e-10 69.7 130 40.8
Manes.05G090000 Manihot esculenta HOM05D000197 ORTHO05D000114 3.4e-10 69.3 132 40.2
Potri.010G096000 Populus trichocarpa HOM05D000197 ORTHO05D000114 3.4e-10 69.3 127 39.4
PGR119G0191 Punica granatum HOM05D000197 ORTHO05D000114 3.4e-10 69.3 127 39.4
RcHm_v2.0_Chr4g0444321 Rosa chinensis HOM05D000197 ORTHO05D000114 3.4e-10 69.3 133 39.1
Gohir.D01G130000 Gossypium hirsutum HOM05D000197 ORTHO05D000114 4.5e-10 68.9 130 40.8
CiPaw.06G073000 Carya illinoinensis HOM05D000197 ORTHO05D000114 5.9e-10 68.6 131 37.4
Eucgr.B02546 Eucalyptus grandis HOM05D000197 ORTHO05D000114 5.9e-10 68.6 90 45.6
Sabra10G0068600 Salix brachista HOM05D000197 ORTHO05D000114 7.7e-10 68.2 129 39.5
AL1G37780 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.0e-09 67.8 90 46.7
Ciclev10032973m.g Citrus clementina HOM05D000197 ORTHO05D000114 1.0e-09 67.8 130 38.5
Gohir.A01G139500 Gossypium hirsutum HOM05D000197 ORTHO05D000114 1.0e-09 67.8 130 40.0
HanXRQChr11g0351041 Helianthus annuus HOM05D000197 ORTHO05D000114 1.0e-09 67.8 90 44.4
Hma1.2p1_1017F.1_g248290 Hydrangea macrophylla HOM05D000197 ORTHO05D000114 1.0e-09 67.8 130 36.9
Lalb_Chr16g0382431 Lupinus albus HOM05D000197 ORTHO05D000114 1.0e-09 67.8 129 39.5
Lj2g0009876 Lotus japonicus HOM05D000197 ORTHO05D000114 1.3e-09 67.4 131 38.9
Nitab4.5_0005555g0020 Nicotiana tabacum HOM05D000197 ORTHO05D000114 1.3e-09 67.4 86 46.5
Sopen05g001890 Solanum pennellii HOM05D000197 ORTHO05D000114 1.3e-09 67.4 85 44.7
PGSC0003DMG400004131 Solanum tuberosum HOM05D000197 ORTHO05D000114 1.3e-09 67.4 85 45.9
Dinv31005 Davidia involucrata HOM05D000197 ORTHO05D000114 1.7e-09 67.0 128 37.5
Dinv31097 Davidia involucrata HOM05D000197 ORTHO05D000114 1.7e-09 67.0 128 37.5
Solyc05g005865.1 Solanum lycopersicum HOM05D000197 ORTHO05D000114 1.7e-09 67.0 85 44.7
GSVIVG01020183001 Vitis vinifera HOM05D000197 ORTHO05D000114 1.7e-09 67.0 126 36.5
AT1G24020 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 2.2e-09 66.6 90 45.6
CAN.G205.30 Capsicum annuum HOM05D000197 ORTHO05D000114 2.2e-09 66.6 126 37.3
Hund05969 Selenicereus undatus HOM05D000197 ORTHO05D000114 2.9e-09 66.2 127 37.8
Dinv24891 Davidia involucrata HOM05D000197 ORTHO05D000114 3.8e-09 65.9 127 33.9
Lsat_1_v5_gn_3_48941 Lactuca sativa HOM05D000197 ORTHO05D000114 3.8e-09 65.9 90 40.0
arahy.Tifrunner.gnm1.ann1.GR2U56 Arachis hypogaea HOM05D000197 ORTHO05D000114 5.0e-09 65.5 135 36.3
HanXRQChr17g0563811 Helianthus annuus HOM05D000197 ORTHO05D000114 5.0e-09 65.5 90 43.3
PSO478G3712 Papaver somniferum HOM05D000197 ORTHO05D000114 5.0e-09 65.5 91 45.1
vmacro16271 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 5.0e-09 65.5 127 35.4
vmacro16272 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 5.0e-09 65.5 124 35.5
arahy.Tifrunner.gnm1.ann1.03DKLN Arachis hypogaea HOM05D000197 ORTHO05D000114 6.5e-09 65.1 104 40.4
Psat4g125760 Pisum sativum HOM05D000197 ORTHO05D000114 6.5e-09 65.1 133 36.1
TAR374G0922 Trochodendron aralioides HOM05D000197 ORTHO05D000114 6.5e-09 65.1 133 36.8
arahy.Tifrunner.gnm1.ann1.WD2ETH Arachis hypogaea HOM05D000197 ORTHO05D000114 8.5e-09 64.7 135 36.3
TWI75G0119 Tripterygium wilfordii HOM05D000197 ORTHO05D000114 1.9e-08 63.5 131 37.4
Carub.0001s2344 Capsella rubella HOM05D000197 ORTHO05D000114 2.5e-08 63.2 89 42.7
Ca_04619_v3 Cicer arietinum L. HOM05D000197 ORTHO05D000114 2.5e-08 63.2 136 35.3
CSS0039522 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 3.2e-08 62.8 123 38.2
Cc11_g14370 Coffea canephora HOM05D000197 ORTHO05D000114 3.2e-08 62.8 88 40.9
ECA246G3263 Erigeron canadensis HOM05D000197 ORTHO05D000114 3.2e-08 62.8 51 64.7
MD16G1088600 Malus domestica HOM05D000197 ORTHO05D000114 3.2e-08 62.8 131 37.4
TPR.G4411 Trifolium pratense HOM05D000197 ORTHO05D000114 3.2e-08 62.8 136 35.3
arahy.Tifrunner.gnm1.ann1.LHUD2K Arachis hypogaea HOM05D000197 ORTHO05D000114 4.2e-08 62.4 82 42.7
BcaC06g35074 Brassica carinata HOM05D000197 ORTHO05D000114 4.2e-08 62.4 90 42.2
A07p13480 Brassica napus HOM05D000197 ORTHO05D000114 4.2e-08 62.4 90 42.2
A07p13670 Brassica napus HOM05D000197 ORTHO05D000114 4.2e-08 62.4 90 42.2
C07p20100 Brassica napus HOM05D000197 ORTHO05D000114 4.2e-08 62.4 90 42.2
BolC7t42531H Brassica oleracea HOM05D000197 ORTHO05D000114 4.2e-08 62.4 90 42.2
BraA07t29119Z Brassica rapa HOM05D000197 ORTHO05D000114 4.2e-08 62.4 90 42.2
CARHR024320 Cardamine hirsuta HOM05D000197 ORTHO05D000114 4.2e-08 62.4 90 42.2
Peaxi162Scf00421g00328 Petunia axillaris HOM05D000197 ORTHO05D000114 4.2e-08 62.4 123 36.6
TPR.G25548 Trifolium pratense HOM05D000197 ORTHO05D000114 4.2e-08 62.4 130 36.2
Actinidia15014 Actinidia chinensis HOM05D000197 ORTHO05D000114 5.5e-08 62.0 127 36.2
Thhalv10008991m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 5.5e-08 62.0 90 41.1
Psat2g109600 Pisum sativum HOM05D000197 ORTHO05D000114 5.5e-08 62.0 131 35.9
Aa31LG7G7810 Aethionema arabicum HOM05D000197 ORTHO05D000114 7.2e-08 61.6 90 40.0
Prupe.1G258100 Prunus persica HOM05D000197 ORTHO05D000114 7.2e-08 61.6 125 37.6
BcaB03g14124 Brassica carinata HOM05D000197 ORTHO05D000114 1.2e-07 60.8 90 42.2
Sp1g21350 Schrenkiella parvula HOM05D000197 ORTHO05D000114 1.2e-07 60.8 116 38.8
Lj3A1050T27 Lonicera japonica HOM05D000197 ORTHO05D000114 1.6e-07 60.5 129 33.3
MD13G1088200 Malus domestica HOM05D000197 ORTHO05D000114 1.6e-07 60.5 133 35.3
arahy.Tifrunner.gnm1.ann1.9J64GE Arachis hypogaea HOM05D000197 ORTHO05D000114 2.1e-07 60.1 82 41.5
SGA_v2.0_scaffold8G04238 Striga asiatica HOM05D000197 ORTHO05D000114 2.1e-07 60.1 131 36.6
TWI36G1572 Tripterygium wilfordii HOM05D000197 ORTHO05D000114 2.1e-07 60.1 129 36.4
CiPaw.05G148600 Carya illinoinensis HOM05D000197 ORTHO05D000114 2.7e-07 59.7 131 33.6
Migut.L01436 Erythranthe guttata HOM05D000197 ORTHO05D000114 3.6e-07 59.3 132 35.6
Ah.03g132470 Amaranthus hybridus HOM05D000197 ORTHO05D000114 4.6e-07 58.9 131 35.9
Dinv24892 Davidia involucrata HOM05D000197 ORTHO05D000114 4.6e-07 58.9 84 42.9
THA.LOC104822191 Tarenaya hassleriana HOM05D000197 ORTHO05D000114 4.6e-07 58.9 89 40.4
TAR622G0624 Trochodendron aralioides HOM05D000197 ORTHO05D000114 4.6e-07 58.9 129 34.9
TAR622G0730 Trochodendron aralioides HOM05D000197 ORTHO05D000114 4.6e-07 58.9 132 33.3
EL10Ac6g13631 Beta vulgaris HOM05D000197 ORTHO05D000114 7.9e-07 58.2 130 37.7
arahy.Tifrunner.gnm1.ann1.SKIU1M Arachis hypogaea HOM05D000197 ORTHO05D000114 1.0e-06 57.8 125 32.0
Sc04g0008950 Simmondsia chinensis HOM05D000197 ORTHO05D000114 1.0e-06 57.8 123 35.8
SalBow2G0185 Salvia bowleyana HOM05D000197 ORTHO05D000114 1.4e-06 57.4 133 30.8
SalBow2G1202 Salvia bowleyana HOM05D000197 ORTHO05D000114 1.4e-06 57.4 133 30.8
Psat2g109640 Pisum sativum HOM05D000197 ORTHO05D000114 2.3e-06 56.6 132 34.1
Rhsim12G0123000 Rhododendron simsii HOM05D000197 ORTHO05D000114 2.3e-06 56.6 123 36.6
MSTRG.611 Avicennia marina HOM05D000197 ORTHO05D000114 3.0e-06 56.2 125 33.6
Glyma.01G034000 Glycine max HOM05D000197 ORTHO05D000114 3.9e-06 55.8 94 40.4
Glyma.02G032300 Glycine max HOM05D000197 ORTHO05D000114 3.9e-06 55.8 94 40.4
Ca_22763_v3 Cicer arietinum L. HOM05D000197 ORTHO05D000114 5.1e-06 55.5 132 31.1
arahy.Tifrunner.gnm1.ann1.M7WURA Arachis hypogaea HOM05D000197 ORTHO05D000114 8.8e-06 54.7 87 37.9
SalBow8G3636 Salvia bowleyana HOM05D000197 ORTHO05D000114 8.8e-06 54.7 131 29.8


User provided reference genes

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