Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013481 Sechium edule HOM05D005672 ORTHO05D003038 2.0e-64 248.8 116 100.0
Sed0008395 Sechium edule HOM05D005672 ORTHO05D003038 1.6e-21 106.3 124 47.6
Sed0015260 Sechium edule HOM05D005672 ORTHO05D003038 1.5e-19 99.8 119 46.2
ClCG09G002220 Citrullus lanatus HOM05D005672 ORTHO05D003038 3.5e-16 88.6 117 37.6
MELO3C023360.2 Cucumis melo HOM05D005672 ORTHO05D003038 5.9e-16 87.8 128 40.6
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 1.6e-13 79.7 114 41.2
Sed0001381 Sechium edule HOM05D005672 ORTHO05D003038 3.6e-13 78.6 117 42.7
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 8.0e-13 77.4 112 42.0
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 1.0e-12 77.0 111 39.6
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.4e-12 76.6 111 36.9
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 2.3e-12 75.9 111 36.9
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 1.2e-11 73.6 114 39.5
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 5.7e-11 71.2 111 36.0
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 2.8e-10 68.9 115 30.4
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 2.8e-10 68.9 114 35.1
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 3.7e-10 68.6 111 36.9
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 6.3e-10 67.8 107 34.6
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 6.3e-10 67.8 107 34.6
MD17G1196900 Malus domestica HOM05D005672 ORTHO05D003038 6.3e-10 67.8 106 37.7
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 8.3e-10 67.4 107 34.6
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 8.3e-10 67.4 119 34.5
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 1.1e-09 67.0 114 32.5
Duzib235G0754 Durio zibethinus HOM05D005672 ORTHO05D003038 1.1e-09 67.0 115 35.7
Duzib192G0991 Durio zibethinus HOM05D005672 ORTHO05D003038 1.4e-09 66.6 104 39.4
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 1.4e-09 66.6 114 34.2
HanXRQChr10g0314951 Helianthus annuus HOM05D005672 ORTHO05D003038 1.8e-09 66.2 112 34.8
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 3.1e-09 65.5 111 36.9
Prupe.3G073200 Prunus persica HOM05D005672 ORTHO05D003038 4.1e-09 65.1 111 33.3
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 5.4e-09 64.7 107 35.5
MELO3C030573.2 Cucumis melo HOM05D005672 ORTHO05D003038 5.4e-09 64.7 113 35.4
Gorai.006G099100 Gossypium raimondii HOM05D005672 ORTHO05D003038 5.4e-09 64.7 112 31.2
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 5.4e-09 64.7 114 34.2
ECA234G3627 Erigeron canadensis HOM05D005672 ORTHO05D003038 7.0e-09 64.3 89 38.2
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 7.0e-09 64.3 122 34.4
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 9.1e-09 63.9 111 31.5
Prupe.3G073000 Prunus persica HOM05D005672 ORTHO05D003038 9.1e-09 63.9 112 34.8
Gohir.A09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 1.2e-08 63.5 112 30.4
MD09G1214600 Malus domestica HOM05D005672 ORTHO05D003038 1.2e-08 63.5 118 32.2
Ciclev10027446m.g Citrus clementina HOM05D005672 ORTHO05D003038 1.6e-08 63.2 106 30.2
Gohir.D09G083500 Gossypium hirsutum HOM05D005672 ORTHO05D003038 1.6e-08 63.2 112 30.4
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 1.6e-08 63.2 107 36.4
Nn8g39245 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.6e-08 63.2 102 34.3
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 3.5e-08 62.0 112 33.0
Prupe.3G073800 Prunus persica HOM05D005672 ORTHO05D003038 4.5e-08 61.6 108 35.2
FvH4_6g30990 Fragaria vesca HOM05D005672 ORTHO05D003038 5.9e-08 61.2 111 35.1
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 7.7e-08 60.8 112 33.9
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 7.7e-08 60.8 107 35.5
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 1.0e-07 60.5 108 35.2
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 1.3e-07 60.1 92 33.7
HanXRQChr14g0455911 Helianthus annuus HOM05D005672 ORTHO05D003038 1.3e-07 60.1 119 33.6
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 1.3e-07 60.1 116 29.3
THA.LOC104823573 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 1.3e-07 60.1 122 34.4
CAN.G395.17 Capsicum annuum HOM05D005672 ORTHO05D003038 1.7e-07 59.7 123 26.8
Prupe.3G072700 Prunus persica HOM05D005672 ORTHO05D003038 2.9e-07 58.9 108 34.3
Sed0004960 Sechium edule HOM05D005672 ORTHO05D003038 3.8e-07 58.5 87 37.9
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 3.8e-07 58.5 107 35.5
Dinv30521 Davidia involucrata HOM05D005672 ORTHO05D003038 5.0e-07 58.2 110 32.7
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 5.0e-07 58.2 121 31.4
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 6.6e-07 57.8 90 34.4
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 6.6e-07 57.8 121 31.4
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 8.6e-07 57.4 121 31.4
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 1.1e-06 57.0 79 32.9
CSS0026145 Camellia sinensis var. sinensis HOM05D005672 ORTHO05D003038 1.5e-06 56.6 60 41.7
MELO3C023363.2 Cucumis melo HOM05D005672 ORTHO05D003038 1.5e-06 56.6 115 31.3
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 1.5e-06 56.6 118 33.1
Manes.04G121900 Manihot esculenta HOM05D005672 ORTHO05D003038 1.9e-06 56.2 110 30.9
Manes.04G122000 Manihot esculenta HOM05D005672 ORTHO05D003038 1.9e-06 56.2 110 30.9
Manes.04G122100 Manihot esculenta HOM05D005672 ORTHO05D003038 1.9e-06 56.2 110 30.9
Duzib235G0878 Durio zibethinus HOM05D005672 ORTHO05D003038 2.5e-06 55.8 98 34.7
Gohir.A09G083700 Gossypium hirsutum HOM05D005672 ORTHO05D003038 2.5e-06 55.8 80 37.5
Oeu006796.1 Olea europaea HOM05D005672 ORTHO05D003038 3.3e-06 55.5 107 31.8
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 3.3e-06 55.5 79 40.5
MSTRG.22696 Avicennia marina HOM05D005672 ORTHO05D003038 7.2e-06 54.3 109 30.3
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 9.5e-06 53.9 93 33.3
Nitab4.5_0000351g0210 Nicotiana tabacum HOM05D005672 ORTHO05D003038 9.5e-06 53.9 116 31.0


User provided reference genes

Program Settings