Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 1.8e-156 555.8 266 100.0
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 3.0e-108 395.6 208 88.9
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 8.3e-106 387.5 209 87.1
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 1.1e-105 387.1 208 86.5
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 1.6e-93 346.7 207 73.9
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 4.4e-91 338.6 234 66.7
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 5.8e-91 338.2 205 73.7
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 9.8e-91 337.4 208 73.6
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 1.4e-89 333.6 223 68.6
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.6e-88 330.1 210 70.0
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 1.6e-88 330.1 203 71.9
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 3.5e-88 328.9 204 71.6
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 4.6e-88 328.6 207 71.0
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 7.8e-88 327.8 204 72.1
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.0e-87 327.4 207 70.5
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 1.3e-87 327.0 204 70.1
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 1.7e-87 326.6 205 71.2
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 3.0e-87 325.9 204 69.6
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 5.0e-87 325.1 204 69.1
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 5.0e-87 325.1 204 69.1
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 8.6e-87 324.3 204 69.1
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 5.6e-86 321.6 206 69.4
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 3.6e-85 318.9 204 69.1
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 1.1e-84 317.4 203 69.0
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 8.9e-84 314.3 205 67.3
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 1.2e-83 313.9 203 69.5
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 4.4e-83 312.0 206 68.0
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 4.4e-83 312.0 204 66.2
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 7.5e-83 311.2 203 69.0
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 1.7e-82 310.1 204 66.2
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 2.2e-82 309.7 204 65.2
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 2.2e-82 309.7 203 67.5
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 6.4e-82 308.1 205 67.8
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 8.3e-82 307.8 208 66.8
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 1.1e-81 307.4 205 67.8
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 1.1e-81 307.4 217 65.0
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 5.4e-81 305.1 204 64.2
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 9.2e-81 304.3 204 66.2
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 9.2e-81 304.3 204 67.2
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 1.2e-80 303.9 208 65.4
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 2.7e-80 302.8 203 65.0
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 2.7e-80 302.8 208 64.4
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 3.5e-80 302.4 208 63.9
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 3.5e-80 302.4 208 64.4
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 4.6e-80 302.0 232 59.5
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 4.6e-80 302.0 232 59.5
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 6.0e-80 301.6 208 65.9
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 2.3e-79 299.7 204 63.7
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 3.0e-79 299.3 208 62.0
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 5.1e-79 298.5 204 66.2
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 9.5e-78 294.3 203 63.1
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 1.6e-77 293.5 194 65.5
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 3.6e-77 292.4 207 62.3
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 8.1e-77 291.2 207 61.8
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 1.1e-76 290.8 184 70.7
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 1.8e-76 290.0 209 62.7
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 4.0e-76 288.9 207 60.9
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 5.2e-76 288.5 205 61.0
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 8.9e-76 287.7 205 65.9
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 1.2e-75 287.3 202 62.4
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 2.0e-75 286.6 205 65.9
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 2.6e-75 286.2 205 61.5
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 2.6e-75 286.2 205 61.0
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 2.6e-75 286.2 207 60.9
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 2.6e-75 286.2 207 60.9
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 3.4e-75 285.8 201 62.2
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 4.4e-75 285.4 205 62.0
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 5.8e-75 285.0 209 61.7
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 7.6e-75 284.6 205 61.0
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 2.2e-74 283.1 164 74.4
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 3.8e-74 282.3 207 59.4
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 4.9e-74 282.0 186 66.7
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 1.4e-73 280.4 208 61.5
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 3.2e-73 279.3 204 61.8
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 1.2e-72 277.3 202 61.4
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 4.6e-72 275.4 207 59.4
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 4.6e-72 275.4 207 59.4
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 4.3e-70 268.9 188 63.8
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 7.3e-70 268.1 222 57.7
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 2.8e-69 266.2 211 57.8
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 3.4e-67 259.2 186 62.9
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 1.3e-66 257.3 178 64.0
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 1.7e-66 256.9 165 69.7
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 5.4e-65 251.9 185 60.5
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 1.2e-64 250.8 163 68.1
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 1.5e-62 243.8 146 71.2
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 5.6e-62 241.9 161 67.1
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 5.6e-62 241.9 161 65.2
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 3.4e-59 232.6 207 54.1
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 4.5e-59 232.3 187 58.8
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 1.1e-57 227.6 146 69.9
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 7.1e-57 224.9 215 49.3
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 7.1e-57 224.9 215 49.3
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 6.0e-56 221.9 149 63.8
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 1.3e-55 220.7 220 47.3
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 5.1e-55 218.8 212 48.1
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 9.9e-51 204.5 148 59.5
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 1.9e-49 200.3 173 52.6
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 2.4e-49 199.9 148 56.1
AUR62017739 Chenopodium quinoa HOM05D007035 ORTHO05D008774 2.5e-46 189.9 122 68.9
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 3.3e-46 189.5 209 45.0
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 3.8e-42 176.0 106 72.6
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 1.4e-41 174.1 106 71.7
CARHR107960 Cardamine hirsuta HOM05D007035 ORTHO05D008774 1.2e-40 171.0 120 62.5
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 6.7e-39 165.2 154 50.0
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 1.2e-32 144.4 145 47.6
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 3.9e-31 139.4 168 40.5
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 6.7e-31 138.7 156 41.7
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 1.5e-27 127.5 110 58.2
Cre17.g720550 Chlamydomonas reinhardtii HOM05D007035 ORTHO05D008774 2.6e-27 126.7 209 33.0
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 5.5e-25 119.0 279 27.6
PRCOL_00002518 Prasinoderma coloniale HOM05D007035 ORTHO05D008774 1.2e-24 117.9 175 35.4
MCO10G322 Micromonas commoda HOM05D007035 ORTHO05D008774 5.7e-22 109.0 162 35.2
Cpa.g.sc6.336 Carica papaya HOM05D007035 ORTHO05D008774 1.2e-16 91.3 59 71.2
Peaxi162Scf00300g00119 Petunia axillaris HOM05D007035 ORTHO05D008774 3.0e-15 86.7 61 62.3
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 1.5e-14 84.3 58 63.8


User provided reference genes

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