Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 1.0e-182 643.3 321 100.0
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 1.6e-151 539.7 293 91.5
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 3.4e-138 495.4 269 90.3
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 7.1e-128 461.1 292 76.0
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 1.0e-126 457.2 291 73.5
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 8.7e-126 454.1 299 73.6
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 8.7e-126 454.1 303 72.6
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 2.5e-125 452.6 288 74.7
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 2.5e-125 452.6 288 74.7
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 2.5e-125 452.6 291 74.6
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 1.3e-124 450.3 289 76.1
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 1.3e-124 450.3 288 75.3
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 2.1e-124 449.5 298 73.5
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 2.8e-124 449.1 291 74.6
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 8.1e-124 447.6 291 73.5
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 1.1e-123 447.2 292 73.3
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 2.4e-123 446.0 297 74.7
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 2.4e-123 446.0 303 71.6
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 2.6e-122 442.6 290 72.4
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 3.4e-122 442.2 296 72.3
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 4.5e-122 441.8 291 73.9
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 5.8e-122 441.4 291 71.8
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 5.8e-122 441.4 291 72.2
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 7.6e-122 441.0 238 91.6
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 9.9e-122 440.7 296 73.3
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 2.2e-121 439.5 295 73.2
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 2.9e-121 439.1 290 73.4
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 2.9e-121 439.1 290 73.4
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 1.4e-120 436.8 290 72.4
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 1.9e-120 436.4 303 70.3
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 5.5e-120 434.9 291 73.9
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 9.3e-120 434.1 303 70.0
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 1.2e-119 433.7 293 72.7
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 1.2e-119 433.7 296 71.6
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 1.2e-119 433.7 298 72.5
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 3.5e-119 432.2 296 70.3
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 6.0e-119 431.4 291 73.2
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 6.0e-119 431.4 293 72.4
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 4.3e-117 425.2 296 68.9
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 4.3e-117 425.2 288 70.1
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 7.4e-117 424.5 293 70.6
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 1.6e-116 423.3 293 70.6
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 2.1e-116 422.9 296 68.2
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 2.1e-116 422.9 296 71.3
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 3.7e-116 422.2 293 71.0
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 3.7e-116 422.2 291 70.1
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 8.2e-116 421.0 293 70.6
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 1.8e-115 419.9 291 72.5
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 4.0e-115 418.7 293 70.0
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 4.0e-115 418.7 291 70.1
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 1.2e-114 417.2 289 70.6
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 1.5e-114 416.8 291 69.4
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 2.0e-114 416.4 289 71.3
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 5.8e-114 414.8 297 69.4
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 1.0e-113 414.1 297 69.7
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 1.0e-113 414.1 288 71.2
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 2.2e-113 412.9 277 72.9
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 4.9e-113 411.8 297 69.4
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 8.4e-113 411.0 288 70.1
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 1.1e-112 410.6 297 69.0
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 1.1e-112 410.6 297 69.0
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 1.4e-112 410.2 289 69.6
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 5.5e-112 408.3 297 68.7
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 2.1e-111 406.4 310 65.8
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 2.7e-111 406.0 291 67.0
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 3.5e-111 405.6 291 69.4
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 3.5e-111 405.6 271 72.3
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 6.0e-111 404.8 288 66.0
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 7.9e-111 404.4 293 66.9
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 3.3e-109 399.1 296 65.2
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 9.7e-109 397.5 294 65.0
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 1.6e-108 396.7 282 70.6
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 3.1e-107 392.5 290 64.8
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 9.0e-107 391.0 303 65.7
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 2.0e-106 389.8 290 64.5
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 7.7e-106 387.9 297 66.0
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 3.2e-104 382.5 275 69.5
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 5.5e-104 381.7 265 68.3
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 2.7e-103 379.4 305 63.9
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 1.1e-101 374.0 313 62.3
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 1.1e-101 374.0 290 62.8
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 6.3e-100 368.2 291 62.9
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 1.7e-97 360.1 292 60.6
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 5.0e-97 358.6 239 72.8
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 1.9e-96 356.7 291 60.1
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 2.1e-95 353.2 244 71.3
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 4.7e-95 352.1 241 69.7
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 5.1e-94 348.6 241 71.8
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 2.6e-93 346.3 305 56.7
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 5.3e-91 338.6 290 60.7
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 1.5e-90 337.0 236 70.8
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 7.7e-90 334.7 392 48.7
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 5.0e-89 332.0 238 71.4
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 2.5e-88 329.7 224 73.2
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 2.4e-83 313.2 316 51.3
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 1.6e-82 310.5 240 66.7
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 8.5e-81 304.7 319 50.8
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 5.4e-67 258.8 205 62.4
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 3.1e-46 189.9 245 42.4
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 5.2e-46 189.1 293 39.2
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 6.6e-41 172.2 131 63.4
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 1.4e-35 154.5 101 72.3
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 2.7e-26 123.6 67 86.6
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 2.3e-25 120.6 79 72.2
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 9.0e-22 108.6 130 45.4
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 5.1e-17 92.8 52 80.8
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 3.6e-15 86.7 50 76.0
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 9.0e-14 82.0 50 72.0
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 2.9e-12 77.0 70 47.1
MCO05G602 Micromonas commoda HOM05D007064 ORTHO05D008772 5.1e-09 66.2 191 28.3
CBR_g6359 Chara braunii HOM05D007064 ORTHO05D008772 6.7e-09 65.9 96 39.6
Pp3c26_5140 Physcomitrium patens HOM05D002406 ORTHO05D007964 2.8e-07 60.5 327 25.1
CDE02G2223 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 4.8e-07 59.7 278 25.2
PRCOL_00004348 Prasinoderma coloniale HOM05D007064 ORTHO05D008772 1.4e-06 58.2 243 25.5


User provided reference genes

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