Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 2.0e-158 562.4 280 100.0
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 1.8e-135 486.1 280 87.5
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 3.9e-130 468.4 281 85.1
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 6.6e-130 467.6 281 85.1
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 4.4e-126 454.9 286 83.2
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 3.8e-101 372.1 287 70.0
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 1.6e-99 366.7 283 68.6
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 3.5e-99 365.5 281 69.8
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 3.3e-97 359.0 282 66.0
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 4.3e-97 358.6 282 68.1
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 5.7e-97 358.2 276 67.8
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 7.4e-97 357.8 285 67.4
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 1.3e-96 357.1 287 65.2
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 1.3e-96 357.1 277 68.2
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 2.8e-96 355.9 276 68.5
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 8.2e-96 354.4 285 64.9
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 1.1e-95 354.0 287 64.8
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 1.4e-95 353.6 280 63.9
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.8e-95 353.2 277 64.3
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.1e-95 352.4 277 64.3
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 3.1e-95 352.4 279 65.9
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 4.1e-95 352.1 292 63.7
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 4.1e-95 352.1 288 65.3
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 1.2e-94 350.5 279 65.2
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 2.6e-94 349.4 281 64.1
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 2.6e-94 349.4 277 67.5
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 3.4e-94 349.0 296 64.5
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 4.5e-94 348.6 286 64.7
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 1.0e-93 347.4 288 64.2
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 1.7e-93 346.7 281 65.8
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 2.2e-93 346.3 290 64.5
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 2.9e-93 345.9 277 65.7
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 3.8e-93 345.5 287 62.0
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 3.8e-93 345.5 290 63.1
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 3.8e-93 345.5 280 65.0
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 3.8e-93 345.5 290 62.8
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 5.0e-93 345.1 285 64.2
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 5.0e-93 345.1 280 65.0
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 6.5e-93 344.7 270 65.2
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 1.1e-92 344.0 293 64.2
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 1.4e-92 343.6 290 62.8
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 1.4e-92 343.6 278 64.7
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 2.5e-92 342.8 180 88.3
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 3.2e-92 342.4 291 63.6
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 4.2e-92 342.0 283 64.3
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 1.6e-91 340.1 291 62.2
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 2.1e-91 339.7 280 61.4
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 7.9e-91 337.8 287 62.4
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 7.9e-91 337.8 293 61.4
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 1.0e-90 337.4 280 65.0
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 1.4e-90 337.0 314 59.2
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 3.0e-90 335.9 291 62.2
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 1.1e-89 334.0 274 63.5
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 1.5e-89 333.6 274 63.1
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 1.5e-89 333.6 274 63.1
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 1.5e-89 333.6 274 63.1
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 2.0e-89 333.2 285 60.4
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 2.0e-89 333.2 284 62.0
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 4.3e-89 332.0 292 61.0
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 4.3e-89 332.0 292 61.3
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 7.4e-89 331.3 280 63.6
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 1.7e-88 330.1 186 82.8
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 1.7e-88 330.1 278 63.3
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 2.8e-88 329.3 277 63.2
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 2.8e-88 329.3 309 58.3
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 3.7e-88 328.9 276 61.2
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 8.2e-88 327.8 283 61.5
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 6.9e-87 324.7 276 62.3
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 6.9e-87 324.7 280 61.1
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 1.5e-86 323.6 179 83.8
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 1.0e-85 320.9 299 59.9
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.3e-85 320.5 283 61.1
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 2.2e-85 319.7 180 84.4
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 2.9e-85 319.3 295 59.3
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 5.0e-85 318.5 277 59.6
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 9.1e-79 297.7 287 59.2
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 9.1e-79 297.7 164 84.1
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 7.7e-78 294.7 194 72.7
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 5.0e-77 292.0 244 61.5
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 6.5e-77 291.6 318 52.5
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 9.4e-76 287.7 285 57.5
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.7e-75 286.2 285 56.1
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 5.7e-73 278.5 149 88.6
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 4.8e-72 275.4 163 78.5
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 5.3e-71 271.9 158 81.6
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 7.7e-70 268.1 154 82.5
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 3.8e-69 265.8 247 60.7
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.1e-68 264.2 170 71.2
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 1.9e-68 263.5 149 83.9
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.2e-65 254.2 279 53.0
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 2.8e-64 249.6 148 79.1
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 6.3e-64 248.4 215 62.3
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 2.2e-61 240.0 293 50.2
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.0e-58 231.1 164 67.1
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 1.2e-57 227.6 249 53.0
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.1e-55 221.1 228 55.7
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 2.4e-55 219.9 188 54.3
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.2e-54 217.6 192 54.2
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 1.6e-54 217.2 189 53.4
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.9e-53 213.0 191 53.4
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 5.2e-50 202.2 137 71.5
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 2.0e-49 200.3 176 58.0
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 7.5e-49 198.4 189 49.7
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 3.2e-47 193.0 192 56.2
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.0e-42 177.9 285 41.8
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 3.1e-42 176.4 279 41.6
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 3.7e-40 169.5 240 40.0
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 6.4e-40 168.7 201 46.3
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 3.0e-37 159.8 105 72.4
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 2.8e-35 153.3 190 46.3
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 1.1e-34 151.4 105 70.5
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 5.8e-33 145.6 176 42.0
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 1.2e-22 111.3 69 76.8
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 8.1e-11 72.0 46 69.6
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 1.6e-06 57.8 62 40.3
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 2.7e-06 57.0 50 54.0


User provided reference genes

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