Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 3.0e-134 481.9 251 100.0
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 2.4e-102 375.9 261 79.7
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 3.1e-102 375.6 261 79.3
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 1.4e-99 366.7 264 77.3
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 4.0e-86 322.0 275 66.2
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 1.7e-84 316.6 262 67.2
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 4.6e-82 308.5 263 68.8
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 1.0e-81 307.4 262 65.6
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 1.3e-81 307.0 268 64.2
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 6.7e-81 304.7 269 66.2
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 1.3e-79 300.4 276 62.7
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 1.6e-79 300.1 255 67.8
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.1e-79 299.7 270 65.2
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 1.4e-78 297.0 271 63.8
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 3.1e-78 295.8 255 63.5
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 5.3e-78 295.0 258 64.7
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 1.5e-77 293.5 258 64.7
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 1.5e-77 293.5 265 64.9
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 7.6e-77 291.2 267 64.0
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 1.3e-76 290.4 265 64.2
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.2e-76 289.7 270 64.1
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 3.8e-76 288.9 272 64.3
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.4e-75 287.0 267 63.3
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 2.5e-75 286.2 265 64.9
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 5.5e-75 285.0 264 63.3
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 9.3e-75 284.3 266 62.0
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 7.9e-74 281.2 256 62.9
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 6.7e-73 278.1 261 61.3
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 1.5e-72 276.9 290 57.2
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 2.5e-72 276.2 271 64.2
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.5e-72 276.2 271 64.2
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.5e-72 276.2 271 64.2
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 9.6e-72 274.2 261 61.7
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 1.3e-71 273.9 255 61.6
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 3.7e-71 272.3 267 59.2
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 4.8e-71 271.9 271 63.5
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 6.2e-71 271.6 260 61.5
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 2.4e-70 269.6 258 59.7
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 2.4e-70 269.6 265 59.2
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 4.1e-70 268.9 267 61.8
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 4.1e-70 268.9 266 59.0
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 1.7e-68 263.5 263 62.0
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 2.5e-67 259.6 267 60.3
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 2.1e-66 256.5 272 57.7
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 5.7e-64 248.4 270 60.0
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 2.8e-63 246.1 276 53.6
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 8.2e-63 244.6 268 56.7
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 1.1e-62 244.2 265 55.1
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 1.2e-61 240.7 254 58.7
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 7.7e-61 238.0 259 60.2
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 2.9e-60 236.1 272 57.0
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 5.0e-60 235.3 277 56.7
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 4.2e-59 232.3 260 57.3
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 9.4e-59 231.1 260 56.9
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 1.2e-58 230.7 260 56.9
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.3e-57 226.5 270 56.3
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 2.3e-57 226.5 261 51.7
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 6.7e-57 224.9 289 51.2
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 1.5e-56 223.8 242 56.2
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 4.3e-56 222.2 267 55.4
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 4.3e-56 222.2 268 53.4
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 5.7e-56 221.9 262 53.8
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 3.7e-55 219.2 258 53.9
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 1.4e-54 217.2 219 59.8
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 1.8e-54 216.9 273 53.1
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 2.4e-54 216.5 264 53.8
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.4e-54 216.5 258 54.7
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 5.3e-54 215.3 258 52.3
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 6.9e-54 214.9 197 63.5
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 9.1e-54 214.5 276 52.9
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 1.2e-53 214.2 258 52.3
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 1.2e-53 214.2 263 51.3
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.2e-53 214.2 272 51.1
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 1.5e-53 213.8 266 52.3
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 2.0e-53 213.4 258 57.0
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 3.4e-53 212.6 255 54.9
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 3.4e-53 212.6 263 52.1
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 1.7e-52 210.3 258 51.6
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 2.9e-52 209.5 256 51.6
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 8.5e-52 208.0 258 51.6
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 6.1e-50 201.8 284 49.3
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 7.9e-50 201.4 284 47.9
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 6.7e-49 198.4 273 50.2
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 1.1e-48 197.6 251 50.2
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 2.0e-48 196.8 233 57.9
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 2.6e-48 196.4 219 55.3
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 2.6e-48 196.4 288 47.2
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 1.3e-47 194.1 266 48.9
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 2.2e-47 193.4 251 49.0
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 5.3e-46 188.7 222 58.1
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 1.3e-44 184.1 250 52.4
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 1.1e-40 171.0 245 53.5
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 1.5e-40 170.6 167 61.1
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 1.1e-38 164.5 238 50.0
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 3.1e-38 162.9 220 50.9
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 4.1e-38 162.5 234 47.0
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 5.3e-38 162.2 215 51.2
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 2.7e-37 159.8 270 44.8
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 2.2e-36 156.8 235 45.5
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 3.8e-36 156.0 267 40.8
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 3.2e-35 152.9 164 62.2
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 2.7e-34 149.8 228 46.5
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 3.6e-34 149.4 172 56.4
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 5.2e-33 145.6 270 42.2
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 8.8e-33 144.8 239 46.0
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 5.0e-28 129.0 108 69.4
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 1.7e-23 114.0 241 40.2
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 1.0e-20 104.8 218 40.8
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 1.7e-20 104.0 243 38.3
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 3.8e-20 102.8 238 39.1
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 5.6e-19 99.0 88 58.0
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 6.6e-12 75.5 86 51.2
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 2.5e-11 73.6 201 37.8
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 1.2e-10 71.2 87 49.4
VMungo0720G2130 Vigna mungo HOM05D002674 ORTHO05D007700 1.2e-08 64.7 35 77.1
Haze_04933 Corylus avellana HOM05D002674 ORTHO05D007700 5.8e-08 62.4 35 74.3
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 1.4e-06 57.8 82 50.0
Rhsim01G0284900 Rhododendron simsii HOM05D000113 ORTHO05D008110 3.2e-06 56.6 43 62.8
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 7.0e-06 55.5 56 53.6
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 9.2e-06 55.1 73 42.5
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 9.2e-06 55.1 62 50.0


User provided reference genes

Program Settings