Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 8.3e-48 193.4 96 100.0
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 1.0e-42 176.4 96 92.7
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 1.7e-37 159.1 96 85.4
MELO3C006388.2 Cucumis melo HOM05D000730 ORTHO05D000578 1.8e-34 149.1 121 66.9
CsaV3_3G011800 Cucumis sativus L. HOM05D005475 ORTHO05D006575 1.9e-28 129.0 74 86.5
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 1.5e-25 119.4 97 61.9
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 2.0e-25 119.0 100 63.0
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 3.4e-25 118.2 98 62.2
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 4.4e-25 117.9 99 63.6
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 7.5e-25 117.1 93 63.4
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 3.7e-24 114.8 94 61.7
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 1.4e-23 112.8 97 60.8
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 1.4e-23 112.8 93 58.1
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 1.4e-23 112.8 96 64.6
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 9.2e-23 110.2 97 61.9
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 9.2e-23 110.2 97 59.8
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 7.8e-22 107.1 97 58.8
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 7.8e-22 107.1 88 61.4
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 7.8e-22 107.1 93 60.2
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.0e-21 106.7 94 59.6
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.0e-21 106.7 94 59.6
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.3e-21 106.3 94 58.5
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 2.3e-21 105.5 96 59.4
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 2.3e-21 105.5 93 58.1
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 3.0e-21 105.1 96 59.4
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 5.1e-21 104.4 93 54.8
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 6.6e-21 104.0 91 60.4
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 1.1e-20 103.2 99 56.6
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 2.5e-20 102.1 96 61.5
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 3.3e-20 101.7 92 54.3
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 5.6e-20 100.9 93 52.7
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 7.3e-20 100.5 94 50.0
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 9.5e-20 100.1 99 55.6
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 3.6e-19 98.2 93 49.5
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 4.7e-19 97.8 94 50.0
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 4.7e-19 97.8 103 57.3
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 6.2e-19 97.4 94 48.9
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 8.1e-19 97.1 95 49.5
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 1.1e-18 96.7 103 52.4
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 1.4e-18 96.3 91 50.5
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 1.4e-18 96.3 61 70.5
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 3.1e-18 95.1 94 54.3
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 3.1e-18 95.1 94 48.9
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 5.2e-18 94.4 92 57.6
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 5.2e-18 94.4 94 55.3
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 6.8e-18 94.0 91 50.5
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 8.9e-18 93.6 86 54.7
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 1.2e-17 93.2 104 54.8
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 1.2e-17 93.2 98 54.1
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 2.0e-17 92.4 100 47.0
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 2.0e-17 92.4 99 54.5
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 4.4e-17 91.3 104 51.9
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 4.4e-17 91.3 88 52.3
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 7.6e-17 90.5 79 57.0
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 9.9e-17 90.1 65 64.6
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 1.3e-16 89.7 96 51.0
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 1.7e-16 89.4 97 48.5
Glyma.20G086200 Glycine max HOM05D005475 ORTHO05D006575 1.7e-16 89.4 78 59.0
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 1.7e-16 89.4 96 51.0
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 2.2e-16 89.0 95 51.6
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 2.2e-16 89.0 83 53.0
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 2.2e-16 89.0 104 52.9
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 2.9e-16 88.6 104 52.9
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 3.7e-16 88.2 77 62.3
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 4.9e-16 87.8 94 53.2
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 4.9e-16 87.8 96 51.0
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 6.4e-16 87.4 96 52.1
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 8.3e-16 87.0 92 51.1
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 8.3e-16 87.0 92 51.1
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 8.3e-16 87.0 104 51.9
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.1e-15 86.7 92 51.1
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.9e-15 85.9 100 46.0
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 1.9e-15 85.9 94 53.2
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 3.2e-15 85.1 95 52.6
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 7.1e-15 84.0 101 44.6
Duzib151G0481 Durio zibethinus HOM05D005475 ORTHO05D006575 7.1e-15 84.0 73 58.9
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.2e-14 83.2 97 47.4
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 1.6e-14 82.8 102 44.1
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 2.7e-14 82.0 96 52.1
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 2.7e-14 82.0 94 51.1
Sabra10G0040200 Salix brachista HOM05D005475 ORTHO05D006575 3.5e-14 81.6 80 58.8
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 6.0e-14 80.9 97 51.5
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 7.8e-14 80.5 90 48.9
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 7.8e-14 80.5 90 48.9
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 1.3e-13 79.7 89 48.3
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 1.3e-13 79.7 63 65.1
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 1.7e-13 79.3 62 62.9
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 1.7e-13 79.3 62 62.9
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 3.0e-13 78.6 89 47.2
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 5.1e-13 77.8 103 49.5
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 5.1e-13 77.8 94 52.1
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 5.1e-13 77.8 81 56.8
Manes.15G044300 Manihot esculenta HOM05D005475 ORTHO05D006575 6.6e-13 77.4 77 54.5
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 1.1e-12 76.6 77 53.2
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 1.1e-12 76.6 95 46.3
Lalb_Chr03g0037011 Lupinus albus HOM05D005475 ORTHO05D006575 1.1e-12 76.6 118 43.2
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 2.5e-12 75.5 56 64.3
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 2.5e-12 75.5 93 49.5
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 3.3e-12 75.1 99 48.5
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 4.3e-12 74.7 66 54.5
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 4.3e-12 74.7 91 47.3
TPR.G27310 Trifolium pratense HOM05D005475 ORTHO05D006575 1.2e-11 73.2 54 64.8
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 1.6e-11 72.8 54 59.3
Lalb_Chr06g0169471 Lupinus albus HOM05D005475 ORTHO05D006575 2.1e-11 72.4 77 54.5
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 1.1e-10 70.1 54 55.6
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 1.1e-10 70.1 54 55.6
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 1.1e-10 70.1 54 55.6
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 1.4e-10 69.7 54 55.6
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 1.4e-10 69.7 54 55.6
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 1.4e-10 69.7 54 55.6
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 1.4e-10 69.7 54 55.6
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 1.8e-10 69.3 88 43.2
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 4.0e-10 68.2 54 55.6
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 4.0e-10 68.2 54 55.6
RcHm_v2.0_Chr4g0394821 Rosa chinensis HOM05D005475 ORTHO05D006575 1.2e-09 66.6 41 68.3
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 1.5e-09 66.2 53 52.8
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 1.5e-09 66.2 58 55.2
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 1.5e-09 66.2 58 55.2
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 1.5e-09 66.2 58 55.2
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 5.8e-09 64.3 47 66.0
AUR62002181 Chenopodium quinoa HOM05D005475 ORTHO05D006575 7.6e-09 63.9 95 47.4
AUR62015529 Chenopodium quinoa HOM05D005475 ORTHO05D006575 7.6e-09 63.9 95 47.4
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 9.9e-09 63.5 54 59.3
Rhsim04G0173600 Rhododendron simsii HOM05D005475 ORTHO05D006575 1.3e-08 63.2 118 36.4
TAR365G0748 Trochodendron aralioides HOM05D005475 ORTHO05D006575 1.3e-08 63.2 72 50.0
FvH4_4g04340 Fragaria vesca HOM05D005475 ORTHO05D006575 6.4e-08 60.8 56 51.8
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 6.4e-08 60.8 70 48.6
Nn1g02914 Nelumbo nucifera HOM05D005475 ORTHO05D006575 1.1e-07 60.1 88 40.9
FAN22G0728 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.4e-07 59.7 58 48.3
FAN22G1457 Fragaria x ananassa HOM05D005475 ORTHO05D006575 2.4e-07 58.9 77 42.9
unitig_26.g9548 Utricularia gibba HOM05D005475 ORTHO05D006575 5.4e-07 57.8 46 58.7
Sc13g0006140 Simmondsia chinensis HOM05D005475 ORTHO05D006575 2.1e-06 55.8 73 46.6
HPP92_007739 Vanilla planifolia HOM05D005475 ORTHO05D006575 7.8e-06 53.9 34 70.6


User provided reference genes

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