Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 1.4e-243 845.9 432 100.0
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 1.8e-166 589.7 431 71.7
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 2.3e-166 589.3 406 74.9
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 2.3e-161 572.8 415 73.0
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 2.7e-146 522.7 415 64.8
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.8e-143 512.7 422 64.2
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 4.7e-143 511.9 423 63.8
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 1.4e-142 510.4 425 64.0
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 1.8e-142 510.0 418 63.4
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 4.0e-142 508.8 425 64.0
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 8.9e-142 507.7 423 63.4
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 8.9e-142 507.7 406 66.3
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 1.2e-141 507.3 423 63.8
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 2.0e-141 506.5 422 63.5
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 2.6e-141 506.1 415 63.6
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.6e-141 506.1 384 66.7
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 1.7e-140 503.4 407 63.9
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 1.2e-138 497.3 417 63.8
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 1.2e-138 497.3 421 62.2
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 6.0e-138 495.0 385 64.7
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 1.7e-137 493.4 409 63.8
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 6.6e-137 491.5 411 63.3
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 3.3e-136 489.2 414 64.3
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 9.5e-136 487.6 366 68.6
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 1.4e-134 483.8 424 60.8
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 4.0e-134 482.3 390 64.6
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 4.0e-134 482.3 417 61.9
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 6.8e-134 481.5 426 59.9
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 8.9e-134 481.1 430 61.4
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 8.9e-134 481.1 407 62.7
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 2.0e-133 479.9 386 63.7
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 3.4e-133 479.2 408 63.0
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 7.6e-133 478.0 430 58.8
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 7.6e-133 478.0 381 64.3
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 1.3e-132 477.2 419 62.1
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 1.7e-132 476.9 433 59.1
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 1.4e-131 473.8 419 61.8
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 3.2e-131 472.6 412 59.7
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 4.6e-130 468.8 384 61.2
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 3.0e-129 466.1 439 59.5
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 5.6e-128 461.8 434 57.4
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 3.8e-124 449.1 384 59.9
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 1.4e-123 447.2 411 58.4
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 1.7e-121 440.3 390 58.5
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 3.9e-121 439.1 385 58.2
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 3.3e-120 436.0 331 66.2
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 5.6e-120 435.3 395 56.5
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 1.3e-119 434.1 437 57.9
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.6e-119 433.7 386 59.6
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 6.2e-119 431.8 384 57.6
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 8.1e-119 431.4 407 58.5
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 8.1e-119 431.4 384 57.6
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.4e-118 430.6 386 59.3
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 3.1e-118 429.5 387 60.5
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 5.3e-118 428.7 387 59.7
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.5e-117 427.2 423 56.7
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 3.4e-117 426.0 386 58.0
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.4e-117 426.0 423 56.7
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 4.5e-117 425.6 421 56.1
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 4.5e-117 425.6 386 58.0
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 5.8e-117 425.2 390 57.2
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 9.9e-117 424.5 386 58.0
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 9.9e-117 424.5 386 58.0
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.3e-116 424.1 386 59.3
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 1.7e-116 423.7 386 58.0
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 3.8e-116 422.5 380 57.4
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 4.9e-116 422.2 406 58.1
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 4.9e-116 422.2 386 58.5
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 8.4e-116 421.4 347 60.5
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.1e-115 421.0 383 56.7
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 3.2e-115 419.5 385 58.4
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 4.2e-115 419.1 386 57.5
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 5.4e-115 418.7 385 58.4
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 2.7e-114 416.4 433 52.2
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 3.5e-114 416.0 387 58.4
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 1.8e-113 413.7 385 57.4
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.8e-113 413.7 383 55.9
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 2.3e-113 413.3 385 57.1
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 3.0e-113 412.9 391 56.8
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 5.1e-113 412.1 390 56.7
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 6.7e-113 411.8 387 57.6
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.1e-112 411.0 387 56.6
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.1e-112 411.0 424 54.5
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 1.9e-112 410.2 387 56.6
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 1.9e-112 410.2 346 58.7
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 4.3e-112 409.1 420 52.6
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 2.1e-111 406.8 423 53.9
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 2.8e-111 406.4 412 54.6
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 6.9e-110 401.7 385 54.5
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 9.0e-110 401.4 387 56.3
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 9.0e-110 401.4 387 56.3
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 2.6e-109 399.8 412 54.6
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 4.5e-109 399.1 390 55.9
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 7.6e-109 398.3 425 52.9
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 1.7e-108 397.1 349 59.6
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 1.3e-105 387.5 426 52.1
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 1.3e-105 387.5 391 55.2
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.8e-105 387.1 419 53.0
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 1.9e-104 383.6 386 56.2
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 4.0e-102 375.9 415 52.5
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 6.5e-100 368.6 426 50.2
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 3.4e-93 346.3 404 48.5
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 9.4e-91 338.2 428 47.9
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 1.3e-84 317.8 342 54.4
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 1.1e-83 314.7 255 64.7
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 1.9e-83 313.9 441 44.9
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 7.2e-83 312.0 409 46.2
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 1.0e-81 308.1 298 56.7
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 8.2e-79 298.5 414 44.9
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 2.4e-78 297.0 228 66.2
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 2.6e-77 293.5 363 49.6
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 4.4e-72 276.2 332 50.0
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 3.6e-66 256.5 387 43.4
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 9.1e-62 241.9 420 43.1
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 2.0e-56 224.2 160 68.1
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 7.5e-56 222.2 265 52.1
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 5.5e-51 206.1 192 55.7
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 6.1e-50 202.6 374 36.4
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 4.0e-49 199.9 429 37.3
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 6.8e-49 199.1 390 35.1
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.0e-44 185.3 400 34.5
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 1.6e-26 124.8 165 47.3
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 6.4e-23 112.8 405 27.4
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 4.3e-19 100.1 173 37.0
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 5.6e-19 99.8 174 36.2
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 3.4e-16 90.5 71 60.6
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 2.4e-14 84.3 189 31.2
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 3.5e-13 80.5 373 26.3
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 9.9e-08 62.4 191 27.7


User provided reference genes

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