Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 4.8e-45 184.1 92 100.0
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 2.1e-40 168.7 92 88.0
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 4.7e-40 167.5 92 88.0
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 7.9e-40 166.8 92 88.0
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 1.4e-39 166.0 92 87.0
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 2.3e-39 165.2 91 85.7
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 2.3e-39 165.2 92 88.0
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 3.0e-39 164.9 92 87.0
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 3.0e-39 164.9 92 85.9
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 3.9e-39 164.5 90 86.7
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 3.9e-39 164.5 92 89.1
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 5.2e-39 164.1 92 87.0
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 5.2e-39 164.1 92 87.0
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 5.2e-39 164.1 92 87.0
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 6.7e-39 163.7 92 87.0
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 8.8e-39 163.3 92 85.9
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 8.8e-39 163.3 92 84.8
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 1.1e-38 162.9 92 84.8
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.5e-38 162.5 92 85.9
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 1.5e-38 162.5 92 87.0
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 1.5e-38 162.5 90 85.6
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 2.0e-38 162.2 90 84.4
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.0e-38 162.2 92 83.7
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.0e-38 162.2 92 83.7
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 2.0e-38 162.2 92 84.8
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 2.6e-38 161.8 88 87.5
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 3.3e-38 161.4 92 84.8
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 3.3e-38 161.4 92 83.7
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 3.3e-38 161.4 92 83.7
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 4.4e-38 161.0 92 83.7
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 4.4e-38 161.0 92 83.7
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 4.4e-38 161.0 92 83.7
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 7.4e-38 160.2 90 84.4
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 9.7e-38 159.8 90 83.3
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 1.3e-37 159.5 88 85.2
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 1.3e-37 159.5 90 85.6
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 1.7e-37 159.1 92 83.7
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 2.8e-37 158.3 88 84.1
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 4.8e-37 157.5 90 82.2
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 4.8e-37 157.5 90 82.2
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 4.8e-37 157.5 90 82.2
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 6.3e-37 157.1 87 85.1
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 6.3e-37 157.1 90 82.2
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 8.2e-37 156.8 92 81.5
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 8.2e-37 156.8 90 82.2
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 8.2e-37 156.8 90 82.2
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 8.2e-37 156.8 90 82.2
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 8.2e-37 156.8 90 81.1
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 8.2e-37 156.8 92 81.5
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 8.2e-37 156.8 92 80.4
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 1.1e-36 156.4 92 80.4
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 1.4e-36 156.0 91 81.3
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 1.4e-36 156.0 92 81.5
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 1.4e-36 156.0 88 83.0
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 2.4e-36 155.2 90 77.8
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 2.4e-36 155.2 92 79.3
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 3.1e-36 154.8 92 82.6
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 3.1e-36 154.8 90 81.1
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 3.1e-36 154.8 90 83.3
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 3.1e-36 154.8 92 80.4
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 4.1e-36 154.5 92 80.4
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 7.0e-36 153.7 90 80.0
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 9.1e-36 153.3 90 80.0
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 1.2e-35 152.9 88 81.8
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 2.0e-35 152.1 92 79.3
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 3.5e-35 151.4 92 80.4
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 3.5e-35 151.4 92 80.4
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 3.5e-35 151.4 92 80.4
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 3.5e-35 151.4 91 78.0
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 3.5e-35 151.4 91 78.0
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 4.5e-35 151.0 92 79.3
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 7.7e-35 150.2 92 79.3
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 7.7e-35 150.2 92 79.3
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 7.7e-35 150.2 92 79.3
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 7.7e-35 150.2 92 79.3
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 7.7e-35 150.2 92 79.3
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 1.0e-34 149.8 90 80.0
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 76.1
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 1.3e-34 149.4 90 78.9
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 1.7e-34 149.1 92 78.3
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 2.9e-34 148.3 92 78.3
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 2.9e-34 148.3 92 78.3
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 2.9e-34 148.3 92 78.3
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 2.9e-34 148.3 92 78.3
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 2.9e-34 148.3 90 81.1
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 3.8e-34 147.9 92 78.3
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 3.8e-34 147.9 92 78.3
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 3.8e-34 147.9 92 78.3
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 5.0e-34 147.5 87 78.2
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.1e-33 146.4 84 81.0
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 1.9e-33 145.6 89 77.5
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 3.2e-33 144.8 84 79.8
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 5.5e-33 144.1 92 77.2
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 1.2e-32 142.9 92 76.1
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 1.2e-32 142.9 92 76.1
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 1.2e-32 142.9 135 58.5
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 2.1e-32 142.1 144 58.3
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 8.0e-32 140.2 92 72.8
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 1.5e-30 136.0 82 79.3
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 2.0e-30 135.6 119 59.7
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 1.7e-29 132.5 92 69.6
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 1.7e-29 132.5 92 69.6
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 2.2e-29 132.1 92 72.8
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 3.1e-28 128.3 120 56.7
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 4.1e-28 127.9 66 92.4
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 2.9e-26 121.7 73 76.7
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 8.5e-26 120.2 66 86.4
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.1e-25 119.8 91 65.9
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 1.1e-25 119.8 66 84.8
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 1.5e-25 119.4 118 57.6
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 2.5e-25 118.6 66 84.8
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 2.1e-24 115.5 65 83.1
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 9.8e-22 106.7 60 80.0
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.2e-19 99.8 96 53.1
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 1.3e-18 96.3 61 70.5
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 1.3e-18 96.3 89 59.6
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 4.2e-17 91.3 94 55.3
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 3.6e-16 88.2 83 48.2
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 3.6e-16 88.2 71 56.3
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 1.2e-14 83.2 90 45.6
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 1.5e-14 82.8 107 47.7
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 1.3e-13 79.7 66 65.2
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 4.9e-13 77.8 72 58.3
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 7.0e-12 73.9 72 55.6
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 9.2e-12 73.6 56 66.1
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 7.3e-09 63.9 62 46.8
Ciclev10027020m.g Citrus clementina HOM05D006364 ORTHO05D007968 2.1e-08 62.4 137 38.0
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 1.4e-07 59.7 67 43.3
Actinidia07522 Actinidia chinensis HOM05D006364 ORTHO05D007968 5.2e-07 57.8 62 51.6
MCO05G593 Micromonas commoda HOM05D006364 ORTHO05D007968 2.6e-06 55.5 71 36.6


User provided reference genes

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