Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 4.3e-283 977.2 466 100.0
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 1.5e-224 782.7 452 82.7
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 2.9e-223 778.5 434 82.3
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 1.4e-222 776.2 429 83.7
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 1.8e-217 759.2 438 81.7
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 8.6e-183 644.0 431 70.1
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.3e-182 642.1 431 70.3
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 1.2e-181 640.2 426 69.7
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 1.2e-181 640.2 427 71.0
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 3.6e-181 638.6 427 69.1
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 1.1e-180 637.1 424 69.6
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 1.8e-180 636.3 430 70.0
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 6.8e-180 634.4 427 68.6
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 3.4e-179 632.1 424 69.6
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 3.4e-179 632.1 427 69.6
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 5.8e-179 631.3 431 68.9
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 5.8e-179 631.3 432 70.1
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 9.8e-179 630.6 432 68.5
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 9.8e-179 630.6 431 69.1
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 4.9e-178 628.2 426 69.2
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 8.3e-178 627.5 425 69.6
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 4.1e-177 625.2 432 68.1
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 5.4e-177 624.8 426 69.0
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 7.1e-177 624.4 425 69.4
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.1e-176 622.9 424 68.4
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 2.7e-176 622.5 433 67.7
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 2.7e-176 622.5 430 69.1
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 4.6e-176 621.7 430 69.1
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 6.0e-176 621.3 428 67.3
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 7.8e-176 620.9 432 67.6
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.7e-175 619.8 435 66.7
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 2.3e-175 619.4 431 67.5
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 3.0e-175 619.0 428 67.1
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.9e-175 618.6 431 67.1
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.9e-175 618.6 431 67.1
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 3.9e-175 618.6 427 67.9
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 3.9e-175 618.6 425 67.8
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 3.3e-174 615.5 425 68.2
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 3.3e-174 615.5 434 67.1
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 3.3e-174 615.5 426 69.0
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.2e-173 613.6 429 68.8
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 1.6e-173 613.2 432 67.6
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 2.1e-173 612.8 430 67.9
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 6.2e-173 611.3 425 68.5
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 8.1e-173 610.9 422 66.1
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 8.1e-173 610.9 422 66.1
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 8.1e-173 610.9 434 68.0
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.2e-171 607.1 422 65.6
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 2.6e-171 605.9 422 65.4
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 2.6e-171 605.9 428 66.4
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.4e-171 605.5 422 65.9
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 3.4e-171 605.5 424 67.5
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 4.4e-171 605.1 428 64.7
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 4.4e-171 605.1 424 65.3
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 5.8e-171 604.7 431 65.7
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.7e-170 603.2 424 66.5
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 1.7e-170 603.2 434 65.7
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 4.9e-170 601.7 424 65.8
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 4.9e-170 601.7 424 66.3
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 6.4e-170 601.3 427 65.1
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 6.4e-170 601.3 432 64.8
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 8.3e-170 600.9 430 64.9
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 3.2e-169 599.0 420 66.2
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 7.1e-169 597.8 424 65.3
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 3.5e-168 595.5 422 66.4
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 4.6e-168 595.1 426 65.3
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 1.3e-167 593.6 427 63.9
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 1.3e-167 593.6 423 65.2
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 8.6e-167 590.9 422 64.7
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 5.6e-166 588.2 426 64.6
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 9.6e-166 587.4 433 64.4
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.8e-165 585.9 427 66.0
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 3.6e-165 585.5 425 63.8
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 6.2e-165 584.7 428 64.0
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 6.2e-165 584.7 426 63.8
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 4.0e-164 582.0 435 64.6
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.2e-163 580.5 420 64.8
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 2.0e-163 579.7 389 67.6
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 2.0e-163 579.7 422 64.7
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 2.0e-163 579.7 426 63.4
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 2.6e-163 579.3 355 73.2
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 1.7e-162 576.6 426 63.4
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 5.4e-161 571.6 357 72.3
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 5.4e-161 571.6 426 62.9
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 7.1e-161 571.2 355 72.1
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 9.3e-161 570.9 424 63.0
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 2.1e-160 569.7 426 62.4
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 8.7e-159 564.3 425 61.9
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 2.5e-158 562.8 423 62.6
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 3.3e-158 562.4 421 63.2
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 4.3e-158 562.0 356 70.5
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 5.6e-158 561.6 421 63.2
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 9.6e-158 560.8 421 62.2
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 1.6e-157 560.1 431 60.8
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 1.6e-157 560.1 424 62.3
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 4.8e-157 558.5 434 62.2
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 1.4e-156 557.0 334 73.7
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 1.8e-156 556.6 429 61.8
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 2.4e-156 556.2 336 73.8
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 3.1e-156 555.8 424 62.0
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 3.1e-156 555.8 424 62.0
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 2.0e-155 553.1 351 70.9
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 1.7e-154 550.1 356 69.4
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 2.2e-154 549.7 431 61.3
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 3.8e-154 548.9 407 63.1
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 3.8e-154 548.9 376 65.4
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 9.3e-153 544.3 432 60.6
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 3.9e-151 538.9 363 67.5
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 7.3e-150 534.6 409 60.1
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 1.3e-149 533.9 365 65.5
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.8e-149 532.7 417 60.4
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.5e-137 493.0 424 57.1
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.1e-136 490.0 365 60.8
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.0e-135 487.6 409 55.5
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 1.5e-131 473.8 288 71.9
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 2.0e-131 473.4 283 72.4
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.0e-127 461.1 360 57.8
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 1.6e-125 453.8 357 59.4
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 2.4e-108 396.7 337 60.2
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 1.3e-93 347.8 380 48.9
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 6.3e-93 345.5 216 69.0
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 3.1e-92 343.2 211 71.1
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 9.1e-92 341.7 275 57.5
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.1e-89 334.7 209 71.8
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.8e-63 247.7 239 55.6
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 6.2e-56 222.6 381 39.4
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 4.6e-27 126.7 98 55.1
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 5.6e-25 119.8 80 63.8
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.5e-22 111.7 58 82.8
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 6.3e-16 89.7 138 37.7


User provided reference genes

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