Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012709 Sechium edule HOM05D006821 ORTHO05D008740 1.2e-181 639.8 331 100.0
ClCG02G016590 Citrullus lanatus HOM05D006821 ORTHO05D008740 9.5e-144 513.8 331 81.6
CsaV3_2G004180 Cucumis sativus L. HOM05D006821 ORTHO05D008740 1.8e-142 509.6 326 81.3
MELO3C004376.2 Cucumis melo HOM05D006821 ORTHO05D008740 2.4e-126 456.1 326 75.8
Manes.08G134300 Manihot esculenta HOM05D006821 ORTHO05D008740 6.5e-100 368.2 328 58.5
Haze_04355 Corylus avellana HOM05D006821 ORTHO05D008740 1.6e-98 363.6 329 55.6
Prupe.6G342700 Prunus persica HOM05D006821 ORTHO05D008740 1.6e-98 363.6 325 59.4
Thecc.05G283900 Theobroma cacao HOM05D006821 ORTHO05D008740 2.1e-98 363.2 331 57.1
Actinidia18357 Actinidia chinensis HOM05D006821 ORTHO05D008740 6.1e-98 361.7 324 58.3
Cfa006429 Carpinus fangiana HOM05D006821 ORTHO05D008740 1.0e-97 360.9 329 55.3
RcHm_v2.0_Chr3g0451171 Rosa chinensis HOM05D006821 ORTHO05D008740 1.3e-97 360.5 325 58.5
Duzib177G0830 Durio zibethinus HOM05D006821 ORTHO05D008740 1.8e-97 360.1 332 56.3
TWI56G0757 Tripterygium wilfordii HOM05D006821 ORTHO05D008740 3.0e-97 359.4 325 58.8
Manes.09G153500 Manihot esculenta HOM05D006821 ORTHO05D008740 3.9e-97 359.0 328 56.1
Duzib128G0425 Durio zibethinus HOM05D006821 ORTHO05D008740 5.1e-97 358.6 332 57.2
FAN09G4578 Fragaria x ananassa HOM05D006821 ORTHO05D008740 5.1e-97 358.6 325 57.8
MD12G1240800 Malus domestica HOM05D006821 ORTHO05D008740 6.7e-97 358.2 325 59.1
FvH4_6g02990 Fragaria vesca HOM05D006821 ORTHO05D008740 1.1e-96 357.5 325 57.2
FAN02G2705 Fragaria x ananassa HOM05D006821 ORTHO05D008740 3.3e-96 355.9 325 57.2
TAR633G1083 Trochodendron aralioides HOM05D006821 ORTHO05D008740 4.3e-96 355.5 328 57.0
FAN05G4221 Fragaria x ananassa HOM05D006821 ORTHO05D008740 7.4e-96 354.8 325 57.2
FAN14G2672 Fragaria x ananassa HOM05D006821 ORTHO05D008740 1.3e-95 354.0 325 56.9
CiPaw.07G067000 Carya illinoinensis HOM05D006821 ORTHO05D008740 2.8e-95 352.8 328 55.2
Sc20g0000300 Simmondsia chinensis HOM05D006821 ORTHO05D008740 2.8e-95 352.8 325 56.9
Hma1.2p1_0195F.1_g084560 Hydrangea macrophylla HOM05D006821 ORTHO05D008740 3.7e-95 352.4 329 58.4
MD04G1224000 Malus domestica HOM05D006821 ORTHO05D008740 3.7e-95 352.4 324 58.0
FAN05G1836 Fragaria x ananassa HOM05D006821 ORTHO05D008740 6.3e-95 351.7 325 56.9
Potri.005G052900 Populus trichocarpa HOM05D006821 ORTHO05D008740 6.3e-95 351.7 331 58.0
CSS0006427 Camellia sinensis var. sinensis HOM05D006821 ORTHO05D008740 1.1e-94 350.9 324 57.1
Gohir.D13G107900 Gossypium hirsutum HOM05D006821 ORTHO05D008740 1.4e-94 350.5 333 53.8
PGSC0003DMG400019432 Solanum tuberosum HOM05D006821 ORTHO05D008740 1.4e-94 350.5 330 56.1
Ciclev10001807m.g Citrus clementina HOM05D006821 ORTHO05D008740 1.8e-94 350.1 333 57.1
Gorai.013G120900 Gossypium raimondii HOM05D006821 ORTHO05D008740 1.2e-93 347.4 333 53.2
CAN.G134.100 Capsicum annuum HOM05D006821 ORTHO05D008740 2.6e-93 346.3 330 54.8
Gohir.A13G104500 Gossypium hirsutum HOM05D006821 ORTHO05D008740 7.7e-93 344.7 333 53.2
CANSAT54G2350 Cannabis sativa HOM05D006821 ORTHO05D008740 1.3e-92 344.0 329 55.3
Nitab4.5_0012228g0010 Nicotiana tabacum HOM05D006821 ORTHO05D008740 1.7e-92 343.6 329 54.1
Potri.013G040500 Populus trichocarpa HOM05D006821 ORTHO05D008740 6.5e-92 341.7 336 55.7
Cc02_g30600 Coffea canephora HOM05D006821 ORTHO05D008740 8.5e-92 341.3 326 56.4
TAR362G0286 Trochodendron aralioides HOM05D006821 ORTHO05D008740 8.5e-92 341.3 328 54.6
COL.COLO4_15343 Corchorus olitorius HOM05D006821 ORTHO05D008740 1.1e-91 340.9 333 54.4
Aqoxy2G03492 Aquilegia oxysepala HOM05D006821 ORTHO05D008740 4.2e-91 339.0 325 57.2
Sopen01g041020 Solanum pennellii HOM05D006821 ORTHO05D008740 5.5e-91 338.6 327 54.4
Glyma.19G244500 Glycine max HOM05D006821 ORTHO05D008740 2.7e-90 336.3 325 55.1
Glyma.03G246900 Glycine max HOM05D006821 ORTHO05D008740 3.6e-90 335.9 324 55.6
Solyc01g097350.4 Solanum lycopersicum HOM05D006821 ORTHO05D008740 3.6e-90 335.9 326 54.3
Peaxi162Scf00282g00328 Petunia axillaris HOM05D006821 ORTHO05D008740 6.1e-90 335.1 330 53.3
Dinv10030 Davidia involucrata HOM05D006821 ORTHO05D008740 1.4e-89 334.0 314 57.6
Atru.chr2.810 Acer truncatum HOM05D006821 ORTHO05D008740 3.9e-89 332.4 329 56.5
arahy.Tifrunner.gnm1.ann1.7SV4PL Arachis hypogaea HOM05D006821 ORTHO05D008740 2.5e-88 329.7 328 52.7
QL03p025768 Quercus lobata HOM05D006821 ORTHO05D008740 1.3e-87 327.4 383 48.3
Nitab4.5_0001592g0080 Nicotiana tabacum HOM05D006821 ORTHO05D008740 3.7e-87 325.9 344 51.2
MBI11_g26138_MAGBIO Magnolia biondii HOM05D006821 ORTHO05D008740 4.8e-87 325.5 329 54.7
Lj1g0025723 Lotus japonicus HOM05D006821 ORTHO05D008740 1.8e-86 323.6 328 51.8
Hund22116 Selenicereus undatus HOM05D006821 ORTHO05D008740 1.8e-86 323.6 324 52.8
GSVIVG01021794001 Vitis vinifera HOM05D006821 ORTHO05D008740 3.1e-86 322.8 324 53.4
AUR62004944 Chenopodium quinoa HOM05D006821 ORTHO05D008740 5.3e-86 322.0 326 52.1
AUR62001014 Chenopodium quinoa HOM05D006821 ORTHO05D008740 6.9e-86 321.6 326 52.8
Oeu038441.1 Olea europaea HOM05D006821 ORTHO05D008740 1.5e-85 320.5 327 52.6
Sabra05G0046500 Salix brachista HOM05D006821 ORTHO05D008740 2.6e-85 319.7 384 49.7
Ca_09420_v3 Cicer arietinum L. HOM05D006821 ORTHO05D008740 1.0e-84 317.8 330 51.8
SalBow4G1195 Salvia bowleyana HOM05D006821 ORTHO05D008740 1.9e-83 313.5 328 50.9
SalBow4G2420 Salvia bowleyana HOM05D006821 ORTHO05D008740 1.9e-83 313.5 328 50.9
DCAR_029732 Daucus carota HOM05D006821 ORTHO05D008740 5.5e-83 312.0 329 53.2
Migut.N01911 Erythranthe guttata HOM05D006821 ORTHO05D008740 2.7e-82 309.7 327 50.5
Phvul.006G101500 Phaseolus vulgaris HOM05D006821 ORTHO05D008740 2.7e-82 309.7 324 50.9
Medtr7g115070 Medicago truncatula HOM05D006821 ORTHO05D008740 3.9e-81 305.8 324 50.9
PGR004G1103 Punica granatum HOM05D006821 ORTHO05D008740 2.6e-80 303.1 330 49.1
VMungo0540G1649 Vigna mungo HOM05D006821 ORTHO05D008740 5.7e-80 302.0 326 50.6
THA.LOC104821676 Tarenaya hassleriana HOM05D006821 ORTHO05D008740 9.7e-80 301.2 325 50.8
PSO461G0046 Papaver somniferum HOM05D006821 ORTHO05D008740 1.7e-79 300.4 331 50.8
Lj7A490T61 Lonicera japonica HOM05D006821 ORTHO05D008740 2.2e-79 300.1 385 46.5
PSO210G3560 Papaver somniferum HOM05D006821 ORTHO05D008740 2.8e-79 299.7 332 48.8
PSO210G3856 Papaver somniferum HOM05D006821 ORTHO05D008740 2.8e-79 299.7 332 48.8
BcaB04g19632 Brassica carinata HOM05D006821 ORTHO05D008740 1.8e-78 297.0 332 47.3
Eucgr.H04340 Eucalyptus grandis HOM05D006821 ORTHO05D008740 5.3e-78 295.4 324 50.9
Psat2g125040 Pisum sativum HOM05D006821 ORTHO05D008740 5.3e-78 295.4 327 51.4
Lalb_Chr04g0262251 Lupinus albus HOM05D006821 ORTHO05D008740 9.1e-78 294.7 328 47.0
Thhalv10004570m.g Eutrema salsugineum HOM05D006821 ORTHO05D008740 1.6e-77 293.9 327 49.2
BolC9t53466H Brassica oleracea HOM05D006821 ORTHO05D008740 7.7e-77 291.6 327 48.6
Aa31LG11G8550 Aethionema arabicum HOM05D006821 ORTHO05D008740 1.0e-76 291.2 325 48.3
BcaC04g23721 Brassica carinata HOM05D006821 ORTHO05D008740 1.3e-76 290.8 327 48.3
C09p05380 Brassica napus HOM05D006821 ORTHO05D008740 1.3e-76 290.8 327 48.3
Sp2g20040 Schrenkiella parvula HOM05D006821 ORTHO05D008740 1.7e-76 290.4 326 48.2
BraA09t36137Z Brassica rapa HOM05D006821 ORTHO05D008740 2.2e-76 290.0 327 47.4
EL10Ac4g09134 Beta vulgaris HOM05D006821 ORTHO05D008740 3.8e-76 289.3 403 42.2
ATR0606G003 Amborella trichopoda HOM05D006821 ORTHO05D008740 5.0e-76 288.9 334 47.6
A09p04980 Brassica napus HOM05D006821 ORTHO05D008740 1.5e-75 287.3 327 47.4
AT5G28830 Arabidopsis thaliana HOM05D006821 ORTHO05D008740 1.0e-73 281.2 322 49.1
AL6G40810 Arabidopsis lyrata HOM05D006821 ORTHO05D008740 2.3e-73 280.0 326 48.5
Carub.0006s2610 Capsella rubella HOM05D006821 ORTHO05D008740 2.3e-73 280.0 328 47.0
SEGI_00561 Sequoiadendron giganteum HOM05D006821 ORTHO05D008740 3.3e-72 276.2 338 46.7
HPP92_024348 Vanilla planifolia HOM05D006821 ORTHO05D008740 1.4e-70 270.8 326 46.6
CARHR185340 Cardamine hirsuta HOM05D006821 ORTHO05D008740 7.0e-70 268.5 327 47.1
Cpa.g.sc117.86 Carica papaya HOM05D006821 ORTHO05D008740 1.2e-69 267.7 302 49.0
TPR.G6944 Trifolium pratense HOM05D006821 ORTHO05D008740 3.5e-69 266.2 248 55.2
CDE07G0065 Ceratophyllum demersum HOM05D006821 ORTHO05D008740 6.5e-68 261.9 328 43.6
CDE04G3363 Ceratophyllum demersum HOM05D006821 ORTHO05D008740 2.5e-67 260.0 329 43.8
Dinv04728 Davidia involucrata HOM05D006821 ORTHO05D008740 6.8e-65 251.9 211 62.1
Nn1g02511 Nelumbo nucifera HOM05D006821 ORTHO05D008740 1.9e-59 233.8 235 55.3
PSO210G3711 Papaver somniferum HOM05D006821 ORTHO05D008740 1.4e-57 227.6 225 53.3
Pp3c20_9750 Physcomitrium patens HOM05D006821 ORTHO05D008740 3.5e-45 186.4 336 33.3
Mapoly0083s0056 Marchantia polymorpha HOM05D006821 ORTHO05D008740 1.7e-44 184.1 345 33.6
Ah.07g201960 Amaranthus hybridus HOM05D006821 ORTHO05D008740 1.3e-36 157.9 324 31.2
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 1.2e-34 151.4 334 33.5
SMO259G0008 Selaginella moellendorffii HOM05D006821 ORTHO05D008740 1.0e-28 131.7 232 31.5
CBR_g10979 Chara braunii HOM05D006821 ORTHO05D008740 1.3e-28 131.3 257 29.6
SMO169G0202 Selaginella moellendorffii HOM05D004759 ORTHO05D005722 1.4e-17 94.7 264 26.1
AagrBONN_evm.TU.Sc2ySwM_228.4145 Anthoceros agrestis HOM05D006821 ORTHO05D008740 4.9e-15 86.3 133 37.6
Os03g0250000 Oryza sativa ssp. japonica HOM05D004759 ORTHO05D005722 5.4e-14 82.8 268 25.7
MELO3C028972.2 Cucumis melo HOM05D006821 ORTHO05D034973 7.1e-14 82.4 83 55.4
ATR0481G015 Amborella trichopoda HOM05D004759 ORTHO05D005722 1.3e-12 78.2 256 25.0
arahy.Tifrunner.gnm1.ann1.8G8R7R Arachis hypogaea HOM05D004759 ORTHO05D005722 1.3e-12 78.2 258 24.8
Sc18g0006740 Simmondsia chinensis HOM05D004759 ORTHO05D005722 1.3e-12 78.2 263 24.3
Thecc.02G068600 Theobroma cacao HOM05D004759 ORTHO05D005722 1.7e-12 77.8 251 25.5
TPR.G17153 Trifolium pratense HOM05D004759 ORTHO05D005722 2.3e-12 77.4 247 23.5
TAR365G0108 Trochodendron aralioides HOM05D006821 ORTHO05D008740 3.0e-12 77.0 140 39.3
arahy.Tifrunner.gnm1.ann1.B05S7J Arachis hypogaea HOM05D004759 ORTHO05D005722 1.1e-11 75.1 258 24.4
CARHR032970 Cardamine hirsuta HOM05D006821 ORTHO05D008740 3.3e-11 73.6 72 47.2
Hma1.2p1_0032F.1_g019720 Hydrangea macrophylla HOM05D004759 ORTHO05D005722 3.3e-11 73.6 257 24.9
Potri.009G127800 Populus trichocarpa HOM05D004759 ORTHO05D005722 5.6e-11 72.8 247 24.3
Actinidia20479 Actinidia chinensis HOM05D004759 ORTHO05D005722 1.3e-10 71.6 290 23.1
unitig_899.g15603 Utricularia gibba HOM05D004759 ORTHO05D005722 1.3e-10 71.6 340 22.1
Cfa005166 Carpinus fangiana HOM05D004759 ORTHO05D005722 1.6e-10 71.2 250 24.0
CiPaw.06G125800 Carya illinoinensis HOM05D004759 ORTHO05D005722 1.6e-10 71.2 247 23.5
COL.COLO4_17240 Corchorus olitorius HOM05D004759 ORTHO05D005722 1.6e-10 71.2 255 25.1
Lalb_Chr19g0139561 Lupinus albus HOM05D004759 ORTHO05D005722 2.1e-10 70.9 268 24.6
Glyma.04G006200 Glycine max HOM05D004759 ORTHO05D005722 4.8e-10 69.7 248 24.2
Sabra09G0098000 Salix brachista HOM05D004759 ORTHO05D005722 4.8e-10 69.7 250 23.6
Hund00052 Selenicereus undatus HOM05D004759 ORTHO05D005722 4.8e-10 69.7 273 23.4
MD05G1114400 Malus domestica HOM05D004759 ORTHO05D005722 8.1e-10 68.9 258 23.3
Lj1g0004015 Lotus japonicus HOM05D004759 ORTHO05D005722 1.4e-09 68.2 247 23.1
Gorai.008G032900 Gossypium raimondii HOM05D004759 ORTHO05D005722 1.8e-09 67.8 265 22.6
Lj5A186G40 Lonicera japonica HOM05D004759 ORTHO05D005722 1.8e-09 67.8 247 23.1
Lsat_1_v5_gn_8_126780 Lactuca sativa HOM05D004759 ORTHO05D005722 2.4e-09 67.4 249 23.7
EL10Ac9g21461 Beta vulgaris HOM05D004759 ORTHO05D005722 3.1e-09 67.0 229 24.5
MD10G1116400 Malus domestica HOM05D004759 ORTHO05D005722 3.1e-09 67.0 257 23.0
Haze_02210 Corylus avellana HOM05D004759 ORTHO05D005722 4.0e-09 66.6 247 24.3
Sabra04G0112000 Salix brachista HOM05D004759 ORTHO05D005722 4.0e-09 66.6 259 24.3
HanXRQChr17g0555191 Helianthus annuus HOM05D004759 ORTHO05D005722 6.9e-09 65.9 249 23.7
Rhsim11G0187000 Rhododendron simsii HOM05D004759 ORTHO05D005722 6.9e-09 65.9 260 24.6
Ciclev10028685m.g Citrus clementina HOM05D004759 ORTHO05D005722 9.0e-09 65.5 251 23.1
vmacro02240 Vaccinium macrocarpon HOM05D004759 ORTHO05D005722 1.2e-08 65.1 257 23.7
vmacro22691 Vaccinium macrocarpon HOM05D004759 ORTHO05D005722 1.2e-08 65.1 257 23.7
Hund06394 Selenicereus undatus HOM05D004759 ORTHO05D005722 2.6e-08 63.9 266 20.3
ECA233G0594 Erigeron canadensis HOM05D004759 ORTHO05D005722 5.8e-08 62.8 249 22.9
Manes.04G079000 Manihot esculenta HOM05D004759 ORTHO05D005722 5.8e-08 62.8 260 23.8
Zm00001eb010730 Zea mays HOM05D004759 ORTHO05D005722 9.9e-08 62.0 263 22.4
Migut.B00161 Erythranthe guttata HOM05D004759 ORTHO05D005722 1.7e-07 61.2 275 21.8
TPR.G24580 Trifolium pratense HOM05D006821 ORTHO05D008740 1.7e-07 61.2 98 40.8
AUR62013108 Chenopodium quinoa HOM05D004759 ORTHO05D005722 2.9e-07 60.5 228 20.6
PSO700G0005 Papaver somniferum HOM05D004759 ORTHO05D005722 2.9e-07 60.5 229 22.3
Ah.01g009490 Amaranthus hybridus HOM05D004759 ORTHO05D005722 3.8e-07 60.1 232 21.6
SGA_v2.0_scaffold32G13244 Striga asiatica HOM05D004759 ORTHO05D005722 3.8e-07 60.1 262 21.8
PSO170G3415 Papaver somniferum HOM05D004759 ORTHO05D005722 4.9e-07 59.7 228 21.1
MSTRG.27666 Avicennia marina HOM05D004759 ORTHO05D005722 6.4e-07 59.3 267 20.2
Sed0012827 Sechium edule HOM05D000600 ORTHO05D000432 6.4e-07 59.3 239 23.4
Sed0015502 Sechium edule HOM05D004759 ORTHO05D005722 6.4e-07 59.3 258 21.3
Nn1g05877 Nelumbo nucifera HOM05D004759 ORTHO05D005722 1.4e-06 58.2 181 24.3
Peaxi162Scf00362g01041 Petunia axillaris HOM05D004759 ORTHO05D005722 1.9e-06 57.8 224 21.9
AUR62010113 Chenopodium quinoa HOM05D004759 ORTHO05D005722 2.4e-06 57.4 228 20.6
MBI05_g15352_MAGBIO Magnolia biondii HOM05D004759 ORTHO05D005722 5.4e-06 56.2 230 23.5
Actinidia00585 Actinidia chinensis HOM05D004759 ORTHO05D005722 9.3e-06 55.5 205 24.4
C07p63570 Brassica napus HOM05D004759 ORTHO05D005722 9.3e-06 55.5 228 21.5
BolC7t46770H Brassica oleracea HOM05D004759 ORTHO05D005722 9.3e-06 55.5 228 21.5
Ca_18993_v3 Cicer arietinum L. HOM05D004759 ORTHO05D005722 9.3e-06 55.5 227 22.0
unitig_61.g26436 Utricularia gibba HOM05D001532 ORTHO05D001402 9.3e-06 55.5 111 27.9


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