Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012615 Sechium edule HOM05D007748 ORTHO05D009345 3.4e-211 738.4 472 100.0
ClCG02G017390 Citrullus lanatus HOM05D007748 ORTHO05D009345 5.3e-87 325.9 373 59.2
Sed0024836 Sechium edule HOM05D007748 ORTHO05D009345 8.1e-80 302.0 485 54.8
CsaV3_6G012500 Cucumis sativus L. HOM05D007748 ORTHO05D009345 4.3e-73 279.6 449 47.9
MELO3C013526.2 Cucumis melo HOM05D007748 ORTHO05D009345 8.1e-72 275.4 391 49.1
QL08p037531 Quercus lobata HOM05D007748 ORTHO05D009345 1.1e-23 115.5 487 37.0
Dinv23701 Davidia involucrata HOM05D007748 ORTHO05D009345 5.3e-23 113.2 474 33.5
Cfa014551 Carpinus fangiana HOM05D007748 ORTHO05D009345 1.3e-21 108.6 492 36.4
VMungo1127G2014 Vigna mungo HOM05D007748 ORTHO05D009345 6.5e-21 106.3 345 28.7
TWI18G1232 Tripterygium wilfordii HOM05D007748 ORTHO05D009345 1.9e-20 104.8 400 36.8
Haze_13098 Corylus avellana HOM05D007748 ORTHO05D009345 1.2e-19 102.1 516 37.6
Thecc.02G172800 Theobroma cacao HOM05D007748 ORTHO05D009345 2.1e-19 101.3 390 31.5
RcHm_v2.0_Chr2g0162021 Rosa chinensis HOM05D007748 ORTHO05D009345 4.7e-19 100.1 466 27.3
Gohir.D02G182800 Gossypium hirsutum HOM05D007748 ORTHO05D009345 6.1e-19 99.8 450 34.2
Phvul.011G112100 Phaseolus vulgaris HOM05D007748 ORTHO05D009345 6.1e-19 99.8 428 27.6
Glyma.06G297400 Glycine max HOM05D007748 ORTHO05D009345 8.0e-19 99.4 452 31.2
Lalb_Chr19g0135431 Lupinus albus HOM05D007748 ORTHO05D009345 8.0e-19 99.4 95 55.8
Manes.13G151000 Manihot esculenta HOM05D007748 ORTHO05D009345 1.0e-18 99.0 419 27.2
Potri.013G145900 Populus trichocarpa HOM05D007748 ORTHO05D009345 1.4e-18 98.6 302 42.1
Duzib052G0236 Durio zibethinus HOM05D007748 ORTHO05D009345 2.0e-17 94.7 269 44.2
PGR142G1582 Punica granatum HOM05D007748 ORTHO05D009345 7.5e-17 92.8 170 35.9
COL.COLO4_13689 Corchorus olitorius HOM05D007748 ORTHO05D009345 1.7e-16 91.7 554 34.3
Peaxi162Scf00132g00079 Petunia axillaris HOM05D012354 ORTHO05D009345 1.7e-16 91.7 417 31.7
Gohir.A03G159700 Gossypium hirsutum HOM05D007748 ORTHO05D009345 2.2e-16 91.3 476 36.3
FAN05G3025 Fragaria x ananassa HOM05D007748 ORTHO05D009345 3.7e-16 90.5 497 27.0
FAN09G1549 Fragaria x ananassa HOM05D007748 ORTHO05D009345 6.3e-16 89.7 495 27.3
TAR627G0547 Trochodendron aralioides HOM05D007748 ORTHO05D009345 1.1e-15 89.0 370 40.8
TAR627G0096 Trochodendron aralioides HOM05D007748 ORTHO05D009345 1.8e-15 88.2 366 41.8
Atru.chr6.3057 Acer truncatum HOM05D007748 ORTHO05D009345 2.4e-15 87.8 290 34.8
Ca_20695_v3 Cicer arietinum L. HOM05D007748 ORTHO05D009345 3.1e-15 87.4 456 25.9
arahy.Tifrunner.gnm1.ann1.5P5A6I Arachis hypogaea HOM05D007748 ORTHO05D009345 4.1e-15 87.0 479 27.1
CiPaw.03G170600 Carya illinoinensis HOM05D007748 ORTHO05D009345 7.0e-15 86.3 486 27.4
FvH4_6g44840 Fragaria vesca HOM05D007748 ORTHO05D009345 1.6e-14 85.1 500 27.0
Prupe.3G232500 Prunus persica HOM05D007748 ORTHO05D009345 1.6e-14 85.1 539 27.1
PGR142G3499 Punica granatum HOM05D007748 ORTHO05D009345 2.0e-14 84.7 444 30.4
arahy.Tifrunner.gnm1.ann1.SX3Q91 Arachis hypogaea HOM05D007748 ORTHO05D009345 2.7e-14 84.3 472 27.5
FAN14G2142 Fragaria x ananassa HOM05D007748 ORTHO05D009345 2.7e-14 84.3 498 26.9
PSO541G5470 Papaver somniferum HOM05D007748 ORTHO05D009345 1.0e-13 82.4 350 30.0
Sabra19G0138300 Salix brachista HOM05D007748 ORTHO05D009345 1.0e-13 82.4 140 36.4
AUR62037378 Chenopodium quinoa HOM05D007748 ORTHO05D009345 1.3e-13 82.0 179 46.4
Actinidia09898 Actinidia chinensis HOM05D007748 ORTHO05D009345 1.9e-12 78.2 490 30.8
Peaxi162Scf00485g00412 Petunia axillaris HOM05D012354 ORTHO05D009345 3.3e-12 77.4 281 42.0
arahy.Tifrunner.gnm1.ann1.2C7EMU Arachis hypogaea HOM05D007748 ORTHO05D009345 4.2e-12 77.0 78 46.2
Potri.019G109200 Populus trichocarpa HOM05D007748 ORTHO05D009345 4.2e-12 77.0 303 39.6
Aqoxy1G02767 Aquilegia oxysepala HOM05D007748 ORTHO05D009345 1.2e-11 75.5 330 28.5
Sabra19G0115100 Salix brachista HOM05D007748 ORTHO05D009345 1.2e-11 75.5 65 55.4
Eucgr.K00931 Eucalyptus grandis HOM05D007748 ORTHO05D009345 2.1e-11 74.7 487 26.1
Glyma.12G107600 Glycine max HOM05D007748 ORTHO05D009345 2.1e-11 74.7 500 24.2
Medtr4g046037 Medicago truncatula HOM05D007748 ORTHO05D009345 2.1e-11 74.7 478 23.6
Hma1.2p1_0565F.1_g179400 Hydrangea macrophylla HOM05D007748 ORTHO05D009345 3.6e-11 73.9 488 26.8
Gorai.005G205200 Gossypium raimondii HOM05D007748 ORTHO05D009345 6.1e-11 73.2 450 34.2
PSO675G9319 Papaver somniferum HOM05D007748 ORTHO05D009345 6.1e-11 73.2 471 28.2
Psat7g197200 Pisum sativum HOM05D007748 ORTHO05D009345 3.0e-10 70.9 359 26.5
TPR.G21671 Trifolium pratense HOM05D007748 ORTHO05D009345 4.0e-10 70.5 444 24.3
Lalb_Chr03g0029211 Lupinus albus HOM05D007748 ORTHO05D009345 8.9e-10 69.3 425 34.6
Actinidia12452 Actinidia chinensis HOM05D007748 ORTHO05D009345 2.0e-09 68.2 461 30.6
Nn1g06734 Nelumbo nucifera HOM05D007748 ORTHO05D009345 2.0e-09 68.2 58 55.2
Sc21g0002430 Simmondsia chinensis HOM05D007748 ORTHO05D009345 2.6e-09 67.8 219 33.3
Zm00001eb069210 Zea mays HOM05D007748 ORTHO05D009345 3.7e-08 63.9 84 38.1
Zm00001eb431720 Zea mays HOM05D007748 ORTHO05D009345 3.7e-08 63.9 84 38.1
arahy.Tifrunner.gnm1.ann1.MF6V35 Arachis hypogaea HOM05D007748 ORTHO05D009345 1.8e-07 61.6 303 25.1
Rhsim06G0150300 Rhododendron simsii HOM05D007748 ORTHO05D009345 2.4e-07 61.2 230 39.6
Lj3g0024600 Lotus japonicus HOM05D007748 ORTHO05D009345 5.4e-07 60.1 493 27.0
Nitab4.5_0005244g0030 Nicotiana tabacum HOM05D012354 ORTHO05D009345 1.6e-06 58.5 430 25.8
CAN.G248.60 Capsicum annuum HOM05D012354 ORTHO05D009345 2.0e-06 58.2 389 33.4
Sopen07g028340 Solanum pennellii HOM05D012354 ORTHO05D009345 2.0e-06 58.2 483 29.2


User provided reference genes

Program Settings