Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012610 Sechium edule HOM05D016278 ORTHO05D008337 9.4e-126 453.8 267 100.0
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 2.3e-55 219.9 278 48.6
CsaV3_2G029560 Cucumis sativus L. HOM05D016278 ORTHO05D008337 1.6e-53 213.8 274 50.0
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 5.5e-49 198.7 276 49.6
CsaV3_2G029550 Cucumis sativus L. HOM05D016278 ORTHO05D008337 1.7e-37 160.6 266 46.2
MELO3C011014.2 Cucumis melo HOM05D016278 ORTHO05D008337 2.7e-32 143.3 272 47.1
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 2.6e-14 83.6 271 30.3
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 1.7e-13 80.9 308 26.9
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 1.4e-12 77.8 275 30.2
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 7.0e-12 75.5 293 29.4
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 9.1e-12 75.1 281 28.1
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 3.5e-11 73.2 274 32.8
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 5.9e-11 72.4 292 26.4
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 7.7e-11 72.0 198 31.8
MELO3C021032.2 Cucumis melo HOM05D016278 ORTHO05D008337 3.8e-10 69.7 63 55.6
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 8.5e-10 68.6 277 28.5
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.5e-09 67.8 287 26.8
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 1.5e-09 67.8 273 28.6
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 2.5e-09 67.0 277 27.8
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 3.2e-09 66.6 281 28.8
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 7.2e-09 65.5 305 26.2
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 7.2e-09 65.5 154 35.7
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 9.4e-09 65.1 316 25.3
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.6e-08 64.3 263 29.3
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.6e-08 64.3 264 29.5
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.1e-08 63.9 236 28.8
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 2.1e-08 63.9 297 25.9
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 4.7e-08 62.8 267 28.8
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 8.0e-08 62.0 209 29.7
Psat6g002840 Pisum sativum HOM05D007760 ORTHO05D008337 1.0e-07 61.6 277 31.8
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 2.3e-07 60.5 221 30.3
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 3.0e-07 60.1 268 29.1
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 3.0e-07 60.1 244 34.0
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 8.8e-07 58.5 230 27.4
TPR.G434 Trifolium pratense HOM05D007760 ORTHO05D008337 8.8e-07 58.5 178 26.4
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 2.0e-06 57.4 293 25.6
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.0e-06 57.4 264 28.8
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 2.6e-06 57.0 301 26.2
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.6e-06 57.0 150 32.0
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 2.6e-06 57.0 324 29.9
vmacro22892 Vaccinium macrocarpon HOM05D007760 ORTHO05D008337 2.6e-06 57.0 244 26.6
Duzib093G0245 Durio zibethinus HOM05D007760 ORTHO05D008337 3.4e-06 56.6 187 27.8
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 3.4e-06 56.6 279 33.0
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 4.4e-06 56.2 252 25.4
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 4.4e-06 56.2 248 29.4
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 7.5e-06 55.5 263 28.5
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 9.8e-06 55.1 332 28.0


User provided reference genes

Program Settings