Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012589 Sechium edule HOM05D005174 ORTHO05D006784 9.2e-176 620.2 324 100.0
ClCG11G015640 Citrullus lanatus HOM05D005174 ORTHO05D006784 2.5e-157 558.9 322 88.5
CsaV3_4G028370 Cucumis sativus L. HOM05D005174 ORTHO05D006784 9.0e-155 550.4 324 86.1
MELO3C032634.2 Cucumis melo HOM05D005174 ORTHO05D006784 6.7e-118 427.9 306 75.8
Prupe.1G501000 Prunus persica HOM05D005174 ORTHO05D006784 7.0e-115 417.9 318 68.2
Ca_13578_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 2.2e-113 412.9 316 69.3
Psat5g120840 Pisum sativum HOM05D005174 ORTHO05D006784 1.6e-111 406.8 318 67.6
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea HOM05D005174 ORTHO05D006784 8.0e-111 404.4 317 66.2
Eucgr.H00450 Eucalyptus grandis HOM05D005174 ORTHO05D006784 4.0e-110 402.1 317 65.9
GSVIVG01008896001 Vitis vinifera HOM05D005174 ORTHO05D006784 2.6e-109 399.4 318 64.5
TWI56G0960 Tripterygium wilfordii HOM05D005174 ORTHO05D006784 4.4e-109 398.7 311 65.0
Lalb_Chr08g0241531 Lupinus albus HOM05D005174 ORTHO05D006784 1.3e-108 397.1 317 65.3
Dinv40398 Davidia involucrata HOM05D005174 ORTHO05D006784 2.2e-108 396.4 316 64.6
Lj1g0014313 Lotus japonicus HOM05D005174 ORTHO05D006784 4.8e-108 395.2 314 66.9
Glyma.14G147200 Glycine max HOM05D005174 ORTHO05D006784 2.4e-107 392.9 316 64.9
Lj5g0013947 Lotus japonicus HOM05D005174 ORTHO05D006784 9.1e-107 391.0 315 65.7
Gorai.005G090400 Gossypium raimondii HOM05D005174 ORTHO05D006784 3.5e-106 389.0 318 63.5
Cpa.g.sc36.39 Carica papaya HOM05D005174 ORTHO05D006784 4.5e-106 388.7 308 66.9
COL.COLO4_12205 Corchorus olitorius HOM05D005174 ORTHO05D006784 7.7e-106 387.9 317 63.7
CANSAT25G0921 Cannabis sativa HOM05D005174 ORTHO05D006784 1.3e-105 387.1 320 65.0
Manes.02G161600 Manihot esculenta HOM05D005174 ORTHO05D006784 1.3e-105 387.1 317 63.4
Medtr3g072620 Medicago truncatula HOM05D005174 ORTHO05D006784 1.7e-105 386.7 315 67.3
Glyma.06G111200 Glycine max HOM05D005174 ORTHO05D006784 2.2e-105 386.3 316 63.3
VMungo1309G0682 Vigna mungo HOM05D005174 ORTHO05D006784 2.2e-105 386.3 320 64.1
TPR.G22992 Trifolium pratense HOM05D005174 ORTHO05D006784 3.8e-105 385.6 318 64.8
Phvul.009G123200 Phaseolus vulgaris HOM05D005174 ORTHO05D006784 1.1e-104 384.0 316 63.6
Potri.005G175900 Populus trichocarpa HOM05D005174 ORTHO05D006784 2.5e-104 382.9 321 62.0
RcHm_v2.0_Chr6g0295461 Rosa chinensis HOM05D005174 ORTHO05D006784 5.5e-104 381.7 316 63.0
PGSC0003DMG400017574 Solanum tuberosum HOM05D005174 ORTHO05D006784 1.6e-103 380.2 315 60.6
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea HOM05D005174 ORTHO05D006784 2.1e-103 379.8 372 56.7
PGR044G1014 Punica granatum HOM05D005174 ORTHO05D006784 2.1e-103 379.8 319 62.1
Gorai.009G244400 Gossypium raimondii HOM05D005174 ORTHO05D006784 2.7e-103 379.4 317 62.1
TAR381G1686 Trochodendron aralioides HOM05D005174 ORTHO05D006784 2.7e-103 379.4 310 64.2
CSS0047682 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 3.6e-103 379.0 313 62.9
Duzib093G0119 Durio zibethinus HOM05D005174 ORTHO05D006784 3.6e-103 379.0 317 62.5
Thecc.08G122000 Theobroma cacao HOM05D005174 ORTHO05D006784 3.6e-103 379.0 316 63.3
Duzib116G0013 Durio zibethinus HOM05D005174 ORTHO05D006784 4.7e-103 378.6 333 60.7
Hund24749 Selenicereus undatus HOM05D005174 ORTHO05D006784 1.4e-102 377.1 329 58.7
CSS0048949 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 1.8e-102 376.7 314 62.4
Gohir.D05G236100 Gossypium hirsutum HOM05D005174 ORTHO05D006784 2.3e-102 376.3 317 61.8
Gohir.A05G233700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 3.0e-102 375.9 317 61.8
QL09p035644 Quercus lobata HOM05D005174 ORTHO05D006784 3.0e-102 375.9 309 64.4
Cc01_g07610 Coffea canephora HOM05D005174 ORTHO05D006784 6.8e-102 374.8 317 60.9
Gohir.D02G080900 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.2e-101 374.0 318 61.9
Ciclev10001813m.g Citrus clementina HOM05D005174 ORTHO05D006784 7.5e-101 371.3 316 61.7
FvH4_2g26610 Fragaria vesca HOM05D005174 ORTHO05D006784 7.5e-101 371.3 316 61.7
FAN24G0526 Fragaria x ananassa HOM05D005174 ORTHO05D006784 7.5e-101 371.3 316 61.7
Sopen06g020560 Solanum pennellii HOM05D005174 ORTHO05D006784 9.8e-101 370.9 315 60.0
Nn5g28198 Nelumbo nucifera HOM05D005174 ORTHO05D006784 1.7e-100 370.2 312 61.9
Cfa015995 Carpinus fangiana HOM05D005174 ORTHO05D006784 4.8e-100 368.6 308 64.0
Solyc06g060420.3 Solanum lycopersicum HOM05D005174 ORTHO05D006784 8.3e-100 367.9 315 59.4
MD15G1352500 Malus domestica HOM05D005174 ORTHO05D006784 1.8e-99 366.7 313 62.6
THA.LOC104806814 Tarenaya hassleriana HOM05D005174 ORTHO05D006784 1.8e-99 366.7 315 60.3
MSTRG.1457 Avicennia marina HOM05D005174 ORTHO05D006784 9.1e-99 364.4 316 62.0
Eucgr.L02995 Eucalyptus grandis HOM05D005174 ORTHO05D006784 1.2e-98 364.0 315 61.0
Oeu047941.1 Olea europaea HOM05D005174 ORTHO05D006784 1.2e-98 364.0 323 60.4
CiPaw.05G223800 Carya illinoinensis HOM05D005174 ORTHO05D006784 2.7e-98 362.8 308 63.0
Sc01g0001320 Simmondsia chinensis HOM05D005174 ORTHO05D006784 5.9e-98 361.7 311 61.7
Lalb_Chr17g0343851 Lupinus albus HOM05D005174 ORTHO05D006784 1.7e-97 360.1 315 61.6
Aqoxy6G00176 Aquilegia oxysepala HOM05D005174 ORTHO05D006784 2.9e-97 359.4 318 58.2
AUR62042433 Chenopodium quinoa HOM05D005174 ORTHO05D006784 6.6e-97 358.2 325 57.8
ECA232G2439 Erigeron canadensis HOM05D005174 ORTHO05D006784 7.2e-96 354.8 308 62.3
Nitab4.5_0008211g0030 Nicotiana tabacum HOM05D005174 ORTHO05D006784 1.2e-95 354.0 330 57.9
Psat2g085920 Pisum sativum HOM05D005174 ORTHO05D006784 6.1e-95 351.7 368 53.8
CARHR036100 Cardamine hirsuta HOM05D005174 ORTHO05D006784 1.0e-94 350.9 309 59.9
Sabra05G0132500 Salix brachista HOM05D005174 ORTHO05D006784 1.4e-94 350.5 378 52.1
SalBow7G2597 Salvia bowleyana HOM05D005174 ORTHO05D006784 2.3e-94 349.7 356 55.3
AT1G44835 Arabidopsis thaliana HOM05D005174 ORTHO05D006784 7.5e-93 344.7 315 59.0
Aa31LG6G9210 Aethionema arabicum HOM05D005174 ORTHO05D006784 1.7e-92 343.6 309 59.2
AUR62018164 Chenopodium quinoa HOM05D005174 ORTHO05D006784 1.7e-92 343.6 335 56.1
BcaB04g17581 Brassica carinata HOM05D005174 ORTHO05D006784 4.9e-92 342.0 315 58.1
Migut.C01145 Erythranthe guttata HOM05D005174 ORTHO05D006784 4.9e-92 342.0 315 58.4
AL1G52500 Arabidopsis lyrata HOM05D005174 ORTHO05D006784 6.3e-92 341.7 313 58.5
HanXRQChr02g0041151 Helianthus annuus HOM05D005174 ORTHO05D006784 6.3e-92 341.7 310 60.0
PSO782G4297 Papaver somniferum HOM05D005174 ORTHO05D006784 8.3e-92 341.3 322 57.1
FAN20G1758 Fragaria x ananassa HOM05D005174 ORTHO05D006784 3.2e-91 339.3 316 58.5
vmacro00818 Vaccinium macrocarpon HOM05D005174 ORTHO05D006784 1.2e-90 337.4 300 62.0
A08p06300 Brassica napus HOM05D005174 ORTHO05D006784 2.7e-90 336.3 310 58.1
Carub.0001s3538 Capsella rubella HOM05D005174 ORTHO05D006784 3.5e-90 335.9 316 57.6
PSO170G4538 Papaver somniferum HOM05D005174 ORTHO05D006784 3.5e-90 335.9 322 56.2
Sp1g33700 Schrenkiella parvula HOM05D005174 ORTHO05D006784 1.0e-89 334.3 315 56.5
Actinidia29457 Actinidia chinensis HOM05D005174 ORTHO05D006784 2.3e-89 333.2 314 58.6
BraA08t32633Z Brassica rapa HOM05D005174 ORTHO05D006784 2.3e-89 333.2 310 58.1
Thhalv10004660m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 2.9e-89 332.8 317 57.1
Lsat_1_v5_gn_4_135460 Lactuca sativa HOM05D005174 ORTHO05D006784 2.9e-89 332.8 336 55.7
BcaC07g37283 Brassica carinata HOM05D005174 ORTHO05D006784 3.9e-89 332.4 310 57.4
C08p07120 Brassica napus HOM05D005174 ORTHO05D006784 3.9e-89 332.4 310 57.4
BolC8t47557H Brassica oleracea HOM05D005174 ORTHO05D006784 3.9e-89 332.4 310 57.4
Atru.chr13.1416 Acer truncatum HOM05D005174 ORTHO05D006784 1.5e-88 330.5 296 58.8
Thhalv10021201m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 2.5e-88 329.7 317 56.5
SGA_v2.0_scaffold52G18977 Striga asiatica HOM05D005174 ORTHO05D006784 2.3e-86 323.2 316 56.6
BcaC08g42881 Brassica carinata HOM05D005174 ORTHO05D006784 4.0e-86 322.4 310 55.5
BolC6t35233H Brassica oleracea HOM05D005174 ORTHO05D006784 5.2e-86 322.0 316 55.1
A10p07300 Brassica napus HOM05D005174 ORTHO05D006784 6.8e-86 321.6 312 56.1
BraSC36t46091Z Brassica rapa HOM05D005174 ORTHO05D006784 6.8e-86 321.6 312 56.1
Peaxi162Scf00051g00623 Petunia axillaris HOM05D005174 ORTHO05D006784 6.8e-86 321.6 315 56.5
C06p00970 Brassica napus HOM05D005174 ORTHO05D006784 5.8e-85 318.5 312 55.4
ATR0193G024 Amborella trichopoda HOM05D005174 ORTHO05D006784 3.7e-84 315.8 313 55.6
EL10Ac2g03105 Beta vulgaris HOM05D005174 ORTHO05D006784 1.4e-83 313.9 306 56.2
RhsimUnG0094500 Rhododendron simsii HOM05D005174 ORTHO05D006784 1.9e-83 313.5 325 55.1
CAN.G1396.5 Capsicum annuum HOM05D005174 ORTHO05D006784 1.7e-81 307.0 254 61.8
CDE05G2191 Ceratophyllum demersum HOM05D005174 ORTHO05D006784 5.6e-80 302.0 315 51.4
Nitab4.5_0000633g0140 Nicotiana tabacum HOM05D005174 ORTHO05D006784 5.2e-78 295.4 315 52.4
Os02g0767700 Oryza sativa ssp. japonica HOM05D005174 ORTHO05D006784 7.5e-77 291.6 317 52.7
Sc01g0001280 Simmondsia chinensis HOM05D005174 ORTHO05D006784 9.8e-77 291.2 263 59.3
FAN27G1282 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.9e-75 287.0 313 52.1
Zm00001eb193560 Zea mays HOM05D005174 ORTHO05D006784 3.2e-75 286.2 323 51.1
FAN15G0922 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.1e-72 277.7 359 49.9
MBI03_g33021_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 4.3e-72 275.8 264 58.7
DCAR_017401 Daucus carota HOM05D005174 ORTHO05D006784 2.1e-71 273.5 224 66.5
Ah.10g032020 Amaranthus hybridus HOM05D005174 ORTHO05D006784 1.9e-67 260.4 317 50.2
unitig_82.g26987 Utricularia gibba HOM05D005174 ORTHO05D006784 6.0e-66 255.4 308 49.7
Mapoly0010s0001 Marchantia polymorpha HOM05D005174 ORTHO05D006784 5.1e-65 252.3 310 47.4
Pp3c18_22250 Physcomitrium patens HOM05D005174 ORTHO05D006784 6.2e-63 245.4 314 46.5
SEGI_02373 Sequoiadendron giganteum HOM05D005174 ORTHO05D006784 1.7e-60 237.3 272 50.0
Gohir.A02G073700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 3.8e-60 236.1 317 45.4
HPP92_001042 Vanilla planifolia HOM05D005174 ORTHO05D006784 2.4e-51 206.8 311 42.1
Cre10.g425950 Chlamydomonas reinhardtii HOM05D005174 ORTHO05D006784 4.5e-45 186.0 327 37.9
Haze_00470 Corylus avellana HOM05D005174 ORTHO05D006784 3.0e-41 173.3 109 80.7
Lj7A337T25 Lonicera japonica HOM05D005174 ORTHO05D006784 5.6e-40 169.1 170 54.1
FAN20G0512 Fragaria x ananassa HOM05D005174 ORTHO05D006784 7.4e-40 168.7 267 43.4
MD08G1166300 Malus domestica HOM05D005174 ORTHO05D006784 1.0e-36 158.3 110 71.8
PRCOL_00005180 Prasinoderma coloniale HOM05D005174 ORTHO05D006784 2.2e-36 157.1 178 45.5
Sabra15G0076900 Salix brachista HOM05D000453 ORTHO05D000387 1.0e-33 148.3 154 54.5
Haze_00471 Corylus avellana HOM05D005174 ORTHO05D006784 1.5e-32 144.4 181 48.6
Hund16845 Selenicereus undatus HOM05D005174 ORTHO05D006784 1.6e-31 141.0 103 68.9
SMO200G0142 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 1.6e-26 124.4 273 33.7
Ca_03754_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 5.9e-21 105.9 100 53.0
Glyma.04G251502 Glycine max HOM05D005174 ORTHO05D006784 6.1e-18 95.9 108 49.1
Sabra02G0067100 Salix brachista HOM05D005174 ORTHO05D006784 6.1e-18 95.9 337 28.5
Ca_03755_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 7.9e-18 95.5 103 52.4
CiPaw.05G223900 Carya illinoinensis HOM05D005174 ORTHO05D006784 6.3e-15 85.9 94 53.2
Cfa010764 Carpinus fangiana HOM05D005174 ORTHO05D006784 1.3e-12 78.2 78 51.3
Duzib041G0272 Durio zibethinus HOM05D005174 ORTHO05D015215 1.3e-12 78.2 54 75.9
arahy.Tifrunner.gnm1.ann1.032V6W Arachis hypogaea HOM05D005174 ORTHO05D015215 1.7e-12 77.8 46 84.8
arahy.Tifrunner.gnm1.ann1.PAU1NR Arachis hypogaea HOM05D005174 ORTHO05D015215 1.7e-12 77.8 46 84.8
arahy.Tifrunner.gnm1.ann1.RE5YQ2 Arachis hypogaea HOM05D005174 ORTHO05D015215 1.7e-12 77.8 46 84.8
MBI04_g30787_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 2.9e-12 77.0 81 51.9
arahy.Tifrunner.gnm1.ann1.S56SQA Arachis hypogaea HOM05D005174 ORTHO05D015215 6.5e-12 75.9 67 58.2
arahy.Tifrunner.gnm1.ann1.W2W6PZ Arachis hypogaea HOM05D005174 ORTHO05D015215 2.5e-11 73.9 45 82.2
Potri.002G085700 Populus trichocarpa HOM05D005174 ORTHO05D050453 4.2e-11 73.2 52 65.4
SEGI_30371 Sequoiadendron giganteum HOM05D005174 ORTHO05D050453 5.1e-09 66.2 51 62.7
arahy.Tifrunner.gnm1.ann1.9F26EH Arachis hypogaea HOM05D005174 ORTHO05D015215 4.8e-07 59.7 51 64.7
FAN24G2292 Fragaria x ananassa HOM05D005174 ORTHO05D006784 4.8e-07 59.7 134 34.3
Oeu059427.1 Olea europaea HOM05D005174 ORTHO05D006784 1.8e-06 57.8 49 53.1
SGA_v2.0_scaffold24G10473 Striga asiatica HOM05D021410 ORTHO05D401290 2.4e-06 57.4 36 72.2


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