Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 1.1e-292 1009.2 487 100.0
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 5.5e-180 634.8 477 69.6
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 6.3e-160 568.2 474 61.8
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 8.2e-160 567.8 474 62.0
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 1.8e-159 566.6 488 63.1
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 1.8e-159 566.6 502 57.8
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 7.7e-158 561.2 479 60.5
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 1.0e-157 560.8 495 58.4
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 6.5e-157 558.1 473 60.9
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 4.2e-156 555.4 473 61.3
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 6.1e-155 551.6 440 63.2
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 7.9e-155 551.2 445 63.4
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 1.8e-154 550.1 463 61.3
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 5.1e-154 548.5 445 63.1
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 6.7e-154 548.1 524 55.7
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 2.6e-153 546.2 653 49.5
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 2.6e-153 546.2 500 59.6
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 5.7e-153 545.0 431 62.9
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 3.7e-152 542.3 448 61.6
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 6.3e-152 541.6 467 60.6
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 6.3e-152 541.6 500 57.4
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 2.4e-151 539.7 471 60.1
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 5.3e-151 538.5 462 61.3
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 5.3e-151 538.5 445 63.1
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 3.4e-150 535.8 479 60.1
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 4.5e-150 535.4 486 58.2
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.5e-150 535.4 428 62.9
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.0e-149 534.3 428 62.6
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 1.7e-149 533.5 490 57.1
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 1.7e-149 533.5 478 58.8
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 1.9e-148 530.0 457 59.1
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 2.5e-148 529.6 482 57.1
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.2e-148 529.3 428 62.4
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 4.2e-148 528.9 422 63.0
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 4.2e-148 528.9 434 62.0
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 7.2e-148 528.1 444 60.6
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 7.2e-148 528.1 428 62.4
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 1.2e-147 527.3 428 62.4
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 1.6e-147 526.9 511 55.8
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 2.1e-147 526.6 443 60.0
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 3.6e-147 525.8 466 59.2
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 3.6e-147 525.8 467 60.0
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 4.7e-147 525.4 481 57.2
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 1.0e-146 524.2 459 57.7
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.4e-146 523.9 428 61.9
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 1.8e-146 523.5 458 58.7
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 1.8e-146 523.5 453 60.5
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 2.3e-146 523.1 470 58.3
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 8.8e-146 521.2 372 66.7
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 2.6e-145 519.6 452 59.3
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 2.6e-145 519.6 489 56.9
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 7.4e-145 518.1 443 59.4
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 1.7e-144 516.9 455 59.3
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 2.2e-144 516.5 493 55.8
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 3.7e-144 515.8 427 60.9
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 6.3e-144 515.0 508 54.9
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 1.8e-143 513.5 441 59.6
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 3.1e-143 512.7 448 58.5
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 9.1e-143 511.1 425 60.7
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 9.1e-143 511.1 440 58.9
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 1.6e-142 510.4 447 59.3
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.0e-142 510.0 477 56.4
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 2.0e-142 510.0 490 55.5
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 3.5e-142 509.2 490 55.1
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 3.5e-142 509.2 512 54.7
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 4.5e-142 508.8 422 59.7
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 7.7e-142 508.1 448 57.6
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 7.7e-142 508.1 476 55.3
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 2.2e-141 506.5 464 57.8
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 2.2e-141 506.5 463 55.9
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 5.0e-141 505.4 427 59.3
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 5.0e-141 505.4 442 57.5
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 6.5e-141 505.0 439 58.5
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 1.1e-140 504.2 488 53.9
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 1.5e-140 503.8 441 57.4
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 1.5e-140 503.8 441 57.4
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 7.2e-140 501.5 461 56.2
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 1.6e-139 500.4 437 59.3
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 2.1e-139 500.0 436 58.3
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 6.1e-139 498.4 447 57.0
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 1.8e-138 496.9 382 64.1
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 6.7e-138 495.0 358 67.0
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 2.0e-137 493.4 460 56.1
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 9.1e-135 484.6 492 53.7
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 2.9e-133 479.6 456 55.3
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 5.0e-133 478.8 457 54.7
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 1.5e-132 477.2 438 56.4
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 4.0e-130 469.2 443 54.9
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 2.0e-129 466.8 461 52.3
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 3.4e-129 466.1 420 54.8
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 7.0e-127 458.4 441 53.5
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 9.1e-127 458.0 433 55.0
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 1.6e-123 447.2 404 58.4
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 1.8e-122 443.7 436 53.9
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 2.0e-121 440.3 380 58.2
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 4.6e-102 375.9 254 69.7
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 1.1e-98 364.8 337 55.8
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 6.6e-85 318.9 231 68.8
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 4.9e-72 276.2 186 69.9
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 3.7e-67 260.0 255 53.7
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 6.2e-67 259.2 270 52.2
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 9.0e-66 255.4 261 52.5
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 1.5e-65 254.6 474 33.8
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 6.0e-62 242.7 261 51.3
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 4.3e-60 236.5 175 66.3
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 5.3e-58 229.6 218 49.1
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 1.2e-54 218.4 589 28.4
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 3.9e-53 213.4 590 29.8
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 4.1e-50 203.4 451 30.2
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 7.6e-49 199.1 155 61.9
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 7.2e-39 166.0 263 39.5
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 1.1e-34 152.1 366 29.2
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 7.2e-31 139.4 138 56.5
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.8e-29 134.8 225 37.3
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 4.8e-27 126.7 127 51.2
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 9.4e-23 112.5 60 80.0
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 2.6e-20 104.4 87 55.2
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 3.5e-17 94.0 56 75.0
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 1.3e-16 92.0 131 40.5
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 6.3e-11 73.2 149 32.9
Cre16.g684900 Chlamydomonas reinhardtii HOM05D006344 ORTHO05D007744 8.3e-11 72.8 175 30.9
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 4.1e-10 70.5 81 49.4
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.6e-09 68.6 66 53.0
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 4.5e-09 67.0 41 73.2
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 1.7e-08 65.1 39 66.7
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 5.0e-08 63.5 79 39.2


User provided reference genes

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