Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012567 Sechium edule HOM05D002873 ORTHO05D002978 5.9e-13 77.0 66 100.0
Sed0007664 Sechium edule HOM05D002873 ORTHO05D002978 1.7e-12 75.5 66 92.4
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 2.1e-10 68.6 68 61.8
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 2.1e-10 68.6 68 61.8
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 2.1e-10 68.6 68 61.8
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 6.1e-10 67.0 68 60.3
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 1.0e-09 66.2 68 60.3
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 1.8e-09 65.5 68 85.3
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 1.8e-09 65.5 68 58.8
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 2.3e-09 65.1 68 77.9
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 4.0e-09 64.3 68 73.5
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 8.9e-09 63.2 66 59.1
MELO3C005501.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.5e-08 62.4 68 82.4
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.5e-08 62.4 68 73.5
Atru.chr10.1869 Acer truncatum HOM05D002873 ORTHO05D002978 2.0e-08 62.0 62 93.5
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 2.6e-08 61.6 68 67.6
Sed0018699 Sechium edule HOM05D002873 ORTHO05D002978 4.4e-08 60.8 68 76.5
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 5.8e-08 60.5 68 52.9
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 1.3e-07 59.3 66 72.7
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 1.3e-07 59.3 67 53.7
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 1.7e-07 58.9 68 54.4
Potri.004G107500 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.7e-07 58.9 68 82.4
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 1.7e-07 58.9 68 79.4
CsaV3_5G038870 Cucumis sativus L. HOM05D002873 ORTHO05D002978 2.9e-07 58.2 31 93.5
FvH4_6g45802 Fragaria vesca HOM05D002873 ORTHO05D002978 2.9e-07 58.2 31 93.5
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 2.9e-07 58.2 31 93.5
FAN05G0873 Fragaria x ananassa HOM05D002873 ORTHO05D002978 2.9e-07 58.2 31 93.5
FAN09G4825 Fragaria x ananassa HOM05D002873 ORTHO05D002978 2.9e-07 58.2 31 93.5
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 2.9e-07 58.2 62 59.7
Sed0026500 Sechium edule HOM05D002873 ORTHO05D002978 2.9e-07 58.2 31 93.5
MELO3C005500.2 Cucumis melo HOM05D002873 ORTHO05D002978 3.7e-07 57.8 68 70.6
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 3.7e-07 57.8 68 75.0
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 4.9e-07 57.4 62 53.2
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 6.4e-07 57.0 68 72.1
FAN14G0065 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.3e-07 56.6 30 93.3
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 63.2
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 63.2
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 1.4e-06 55.8 68 51.5
MELO3C033537.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.4e-06 55.8 31 90.3
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.9e-06 55.5 68 67.6
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.9e-06 55.5 68 67.6
MELO3C022079.2 Cucumis melo HOM05D002873 ORTHO05D002978 2.4e-06 55.1 29 93.1
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 2.4e-06 55.1 68 69.1
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 4.1e-06 54.3 69 62.3
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 5.4e-06 53.9 68 63.2
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 5.4e-06 53.9 66 63.6
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 5.4e-06 53.9 62 61.3
Migut.N00991 Erythranthe guttata HOM05D002873 ORTHO05D002978 7.0e-06 53.5 66 81.8
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 7.0e-06 53.5 64 51.6
Nitab4.5_0015566g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 7.0e-06 53.5 66 75.8
PGR042G3018 Punica granatum HOM05D002873 ORTHO05D002978 7.0e-06 53.5 62 74.2


User provided reference genes

Program Settings