Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 4.4e-80 301.2 149 100.0
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 3.4e-40 168.7 93 91.4
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 3.4e-40 168.7 93 91.4
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 1.3e-39 166.8 93 90.3
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 2.3e-36 156.0 93 84.9
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 6.4e-31 137.9 93 78.5
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 2.4e-30 136.0 93 69.9
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 3.2e-30 135.6 93 77.4
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 1.2e-29 133.7 94 74.5
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 1.6e-29 133.3 98 73.5
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.1e-29 132.9 93 75.3
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.1e-29 132.9 93 75.3
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 2.7e-29 132.5 93 71.0
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 6.0e-29 131.3 93 76.3
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 7.8e-29 131.0 93 75.3
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 1.0e-28 130.6 93 76.3
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 1.0e-28 130.6 93 76.3
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 1.0e-28 130.6 93 74.2
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 1.3e-28 130.2 93 76.3
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 2.3e-28 129.4 93 76.3
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.3e-28 129.4 93 73.1
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 5.1e-28 128.3 110 63.6
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 6.6e-28 127.9 95 70.5
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 8.7e-28 127.5 93 68.8
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 8.7e-28 127.5 93 74.2
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 8.7e-28 127.5 93 74.2
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 1.1e-27 127.1 93 73.1
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 7.3e-27 124.4 94 72.3
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 9.6e-27 124.0 97 69.1
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 9.6e-27 124.0 90 71.1
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 1.2e-26 123.6 93 69.9
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 1.6e-26 123.2 93 69.9
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 2.8e-26 122.5 93 67.7
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 2.8e-26 122.5 93 69.9
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 3.6e-26 122.1 93 66.7
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 8.1e-26 120.9 95 73.7
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 1.1e-25 120.6 93 67.7
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.1e-25 120.6 93 65.6
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 1.1e-25 120.6 93 65.6
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 1.1e-25 120.6 84 73.8
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 1.1e-25 120.6 97 67.0
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 1.8e-25 119.8 93 69.9
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 1.8e-25 119.8 93 68.8
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 2.4e-25 119.4 93 67.7
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 2.4e-25 119.4 95 67.4
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 3.1e-25 119.0 93 68.8
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 9.0e-25 117.5 95 71.6
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 9.0e-25 117.5 104 67.3
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 1.5e-24 116.7 87 64.4
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 5.8e-24 114.8 83 69.9
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 7.6e-24 114.4 95 66.3
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 2.2e-23 112.8 89 66.3
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 2.2e-23 112.8 99 61.6
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 3.8e-23 112.1 99 63.6
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 3.8e-23 112.1 100 63.0
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 6.4e-23 111.3 102 65.7
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 1.1e-22 110.5 91 67.0
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 3.2e-22 109.0 84 66.7
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 3.2e-22 109.0 93 62.4
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 3.2e-22 109.0 93 62.4
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 4.2e-22 108.6 83 69.9
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 5.4e-22 108.2 100 63.0
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 7.1e-22 107.8 101 59.4
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 7.1e-22 107.8 93 61.3
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 7.1e-22 107.8 93 60.2
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 7.1e-22 107.8 95 62.1
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 7.1e-22 107.8 101 61.4
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 1.2e-21 107.1 89 64.0
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 1.2e-21 107.1 92 65.2
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 1.6e-21 106.7 100 62.0
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 1.6e-21 106.7 89 62.9
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 2.7e-21 105.9 102 58.8
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 4.6e-21 105.1 93 60.2
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 6.0e-21 104.8 96 63.5
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 7.8e-21 104.4 104 59.6
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 7.8e-21 104.4 86 68.6
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 1.0e-20 104.0 93 59.1
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 1.0e-20 104.0 103 59.2
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 1.0e-20 104.0 102 61.8
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 1.7e-20 103.2 94 59.6
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 1.7e-20 103.2 101 60.4
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 2.3e-20 102.8 79 68.4
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 2.3e-20 102.8 100 60.0
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 3.0e-20 102.4 93 60.2
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 3.9e-20 102.1 93 58.1
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 3.9e-20 102.1 103 60.2
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 5.1e-20 101.7 96 61.5
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 5.1e-20 101.7 93 60.2
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 6.6e-20 101.3 93 60.2
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 6.6e-20 101.3 93 57.0
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 6.6e-20 101.3 92 64.1
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 8.7e-20 100.9 97 59.8
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 8.7e-20 100.9 97 56.7
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 8.7e-20 100.9 103 58.3
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 1.1e-19 100.5 93 58.1
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 1.1e-19 100.5 93 60.2
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 1.1e-19 100.5 102 57.8
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 1.1e-19 100.5 88 62.5
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 1.1e-19 100.5 83 63.9
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 1.5e-19 100.1 77 64.9
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 1.5e-19 100.1 93 60.2
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 1.9e-19 99.8 105 56.2
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 1.9e-19 99.8 93 59.1
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 1.9e-19 99.8 126 52.4
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 1.9e-19 99.8 101 56.4
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 1.9e-19 99.8 103 57.3
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 2.5e-19 99.4 97 57.7
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 2.5e-19 99.4 100 56.0
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 2.5e-19 99.4 103 57.3
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 3.3e-19 99.0 70 72.9
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 3.3e-19 99.0 102 56.9
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 4.3e-19 98.6 98 59.2
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 5.6e-19 98.2 85 62.4
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 5.6e-19 98.2 94 56.4
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 5.6e-19 98.2 99 57.6
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 5.6e-19 98.2 93 58.1
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 5.6e-19 98.2 102 57.8
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 7.3e-19 97.8 97 55.7
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 7.3e-19 97.8 95 55.8
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 7.3e-19 97.8 95 55.8
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 9.6e-19 97.4 93 55.9
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 9.6e-19 97.4 92 56.5
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 9.6e-19 97.4 92 56.5
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 9.6e-19 97.4 92 56.5
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 9.6e-19 97.4 99 57.6
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 1.3e-18 97.1 93 57.0
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 1.6e-18 96.7 99 56.6
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 2.1e-18 96.3 94 57.4
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 2.1e-18 96.3 99 57.6
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 2.8e-18 95.9 101 55.4
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 3.6e-18 95.5 85 61.2
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 3.6e-18 95.5 102 55.9
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 3.6e-18 95.5 94 56.4
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 3.6e-18 95.5 94 56.4
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 3.6e-18 95.5 97 58.8
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 4.8e-18 95.1 96 56.2
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 4.8e-18 95.1 96 56.2
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 8.1e-18 94.4 93 55.9
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 8.1e-18 94.4 99 57.6
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 1.1e-17 94.0 93 55.9
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 1.4e-17 93.6 82 59.8
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 1.4e-17 93.6 94 56.4
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 1.4e-17 93.6 94 56.4
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.4e-17 93.6 105 54.3
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 2.4e-17 92.8 86 58.1
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 6.9e-17 91.3 104 53.8
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 1.5e-16 90.1 97 54.6
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.5e-16 90.1 95 53.7
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 2.0e-16 89.7 81 56.8
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 3.4e-16 89.0 86 65.1
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 4.5e-16 88.6 95 53.7
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 5.8e-16 88.2 86 58.1
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 7.6e-16 87.8 95 53.7
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 9.9e-16 87.4 92 56.5
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 1.3e-15 87.0 96 53.1
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 2.2e-15 86.3 81 60.5
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 3.8e-15 85.5 101 49.5
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 8.4e-15 84.3 76 60.5
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 8.4e-15 84.3 76 60.5
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 1.1e-14 84.0 76 60.5
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 1.9e-14 83.2 116 48.3
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 1.9e-14 83.2 116 48.3
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 1.9e-14 83.2 75 53.3
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 2.4e-14 82.8 94 53.2
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 2.4e-14 82.8 94 53.2
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 2.4e-14 82.8 94 53.2
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 2.4e-14 82.8 81 58.0
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 3.2e-14 82.4 94 53.2
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 3.2e-14 82.4 74 60.8
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 5.4e-14 81.6 89 52.8
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 2.7e-13 79.3 74 59.5
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 2.7e-13 79.3 74 59.5
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 4.6e-13 78.6 74 58.1
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 6.0e-13 78.2 97 46.4
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 6.0e-13 78.2 92 51.1
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 2.3e-12 76.3 74 55.4
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 3.0e-12 75.9 93 53.8
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 1.3e-10 70.5 76 51.3
SMO001G0027 Selaginella moellendorffii HOM05D003613 ORTHO05D004055 2.1e-10 69.7 76 51.3
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 4.8e-10 68.6 78 57.7
Pp3c14_25540 Physcomitrium patens HOM05D003613 ORTHO05D004055 3.1e-09 65.9 83 48.2
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 1.5e-08 63.5 83 44.6
AagrBONN_evm.TU.Sc2ySwM_368.2820 Anthoceros agrestis HOM05D003613 ORTHO05D004055 2.2e-07 59.7 52 53.8
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 4.9e-07 58.5 63 57.1
Mapoly0033s0168 Marchantia polymorpha HOM05D000087 ORTHO05D255883 3.2e-06 55.8 60 51.7
Nitab4.5_0002302g0110 Nicotiana tabacum HOM05D003613 ORTHO05D004055 9.3e-06 54.3 60 56.7


User provided reference genes

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