Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012525 Sechium edule HOM05D006791 ORTHO05D008221 4.2e-192 674.5 329 100.0
ClCG09G020610 Citrullus lanatus HOM05D006791 ORTHO05D008221 9.1e-163 577.0 373 76.1
MELO3C002896.2 Cucumis melo HOM05D006791 ORTHO05D008221 8.3e-156 553.9 367 75.2
CsaV3_5G025780 Cucumis sativus L. HOM05D006791 ORTHO05D008221 7.7e-154 547.4 374 73.5
CiPaw.01G274700 Carya illinoinensis HOM05D006791 ORTHO05D008221 1.1e-126 457.2 361 61.2
Thecc.10G070300 Theobroma cacao HOM05D006791 ORTHO05D008221 3.1e-126 455.7 363 62.0
RcHm_v2.0_Chr1g0363851 Rosa chinensis HOM05D006791 ORTHO05D008221 4.0e-126 455.3 368 61.7
FvH4_7g19860 Fragaria vesca HOM05D006791 ORTHO05D008221 1.2e-125 453.8 367 61.6
Actinidia03042 Actinidia chinensis HOM05D006791 ORTHO05D008221 2.0e-125 453.0 370 60.5
FAN06G1214 Fragaria x ananassa HOM05D006791 ORTHO05D008221 3.4e-125 452.2 367 61.3
FAN03G2469 Fragaria x ananassa HOM05D006791 ORTHO05D008221 9.9e-125 450.7 365 61.6
QL08p056563 Quercus lobata HOM05D006791 ORTHO05D008221 2.2e-124 449.5 363 61.7
Gohir.D06G176900 Gossypium hirsutum HOM05D006791 ORTHO05D008221 9.2e-123 444.1 362 61.9
MD07G1176900 Malus domestica HOM05D006791 ORTHO05D008221 1.2e-122 443.7 366 59.0
Ca_10581_v3 Cicer arietinum L. HOM05D006791 ORTHO05D008221 6.0e-122 441.4 360 59.2
PGR142G3028 Punica granatum HOM05D006791 ORTHO05D008221 6.0e-122 441.4 360 61.4
TPR.G1805 Trifolium pratense HOM05D006791 ORTHO05D008221 6.0e-122 441.4 366 58.7
CSS0049359 Camellia sinensis var. sinensis HOM05D006791 ORTHO05D008221 1.0e-121 440.7 369 58.8
CSS0037701 Camellia sinensis var. sinensis HOM05D006791 ORTHO05D008221 2.3e-121 439.5 369 58.5
Gorai.010G204900 Gossypium raimondii HOM05D006791 ORTHO05D008221 2.3e-121 439.5 366 60.4
Potri.008G042000 Populus trichocarpa HOM05D006791 ORTHO05D008221 2.3e-121 439.5 361 61.2
Dinv31358 Davidia involucrata HOM05D006791 ORTHO05D008221 8.6e-121 437.6 359 60.7
Gohir.A06G178100 Gossypium hirsutum HOM05D006791 ORTHO05D008221 1.1e-120 437.2 362 60.8
Lalb_Chr06g0162211 Lupinus albus HOM05D006791 ORTHO05D008221 3.3e-120 435.6 359 59.3
Prupe.2G215700 Prunus persica HOM05D006791 ORTHO05D008221 2.8e-119 432.6 362 59.9
Medtr1g095580 Medicago truncatula HOM05D006791 ORTHO05D008221 4.7e-119 431.8 358 58.4
Duzib106G0039 Durio zibethinus HOM05D006791 ORTHO05D008221 2.4e-118 429.5 364 60.2
Glyma.20G178400 Glycine max HOM05D006791 ORTHO05D008221 3.1e-118 429.1 359 57.4
Nn2g10715 Nelumbo nucifera HOM05D006791 ORTHO05D008221 5.2e-118 428.3 368 56.8
arahy.Tifrunner.gnm1.ann1.86UM3X Arachis hypogaea HOM05D006791 ORTHO05D008221 6.8e-118 427.9 355 58.6
Oeu033855.1 Olea europaea HOM05D006791 ORTHO05D008221 1.2e-117 427.2 366 58.7
THA.LOC104802594 Tarenaya hassleriana HOM05D006791 ORTHO05D008221 7.6e-117 424.5 363 57.6
Psat6g185200 Pisum sativum HOM05D006791 ORTHO05D008221 1.7e-116 423.3 357 58.3
Eucgr.G02814 Eucalyptus grandis HOM05D006791 ORTHO05D008221 2.2e-116 422.9 358 58.7
MBI14_g40667_MAGBIO Magnolia biondii HOM05D006791 ORTHO05D008221 2.9e-116 422.5 364 59.6
Lj5g0025337 Lotus japonicus HOM05D006791 ORTHO05D008221 3.8e-116 422.2 343 58.9
GSVIVG01016310001 Vitis vinifera HOM05D006791 ORTHO05D008221 6.4e-116 421.4 342 60.2
Phvul.007G093000 Phaseolus vulgaris HOM05D006791 ORTHO05D008221 8.4e-116 421.0 358 57.5
CANSAT56G4374 Cannabis sativa HOM05D006791 ORTHO05D008221 1.4e-115 420.2 359 58.5
Sopen02g013520 Solanum pennellii HOM05D006791 ORTHO05D008221 2.4e-115 419.5 359 57.7
Cpa.g.sc466.9 Carica papaya HOM05D006791 ORTHO05D008221 1.6e-114 416.8 339 61.9
Solyc02g062520.3 Solanum lycopersicum HOM05D006791 ORTHO05D008221 1.6e-114 416.8 359 57.1
Migut.F01766 Erythranthe guttata HOM05D006791 ORTHO05D008221 2.7e-114 416.0 351 58.4
Thhalv10010446m.g Eutrema salsugineum HOM05D006791 ORTHO05D008221 7.8e-114 414.5 369 58.3
EL10Ac2g03590 Beta vulgaris HOM05D006791 ORTHO05D008221 3.9e-113 412.1 385 55.1
SalBow3G2210 Salvia bowleyana HOM05D006791 ORTHO05D008221 8.1e-111 404.4 367 54.8
HanXRQChr08g0219631 Helianthus annuus HOM05D006791 ORTHO05D008221 1.8e-110 403.3 358 55.9
AL5G32850 Arabidopsis lyrata HOM05D006791 ORTHO05D008221 2.4e-110 402.9 367 58.3
FAN01G2861 Fragaria x ananassa HOM05D002197 ORTHO05D008221 3.1e-110 402.5 364 57.4
CAN.G131.1 Capsicum annuum HOM05D006791 ORTHO05D008221 4.0e-110 402.1 357 56.0
Haze_16919 Corylus avellana HOM05D006791 ORTHO05D008221 4.0e-110 402.1 384 54.2
SGA_v2.0_scaffold341G49357 Striga asiatica HOM05D006791 ORTHO05D008221 4.0e-110 402.1 355 56.6
ECA233G0118 Erigeron canadensis HOM05D000058 ORTHO05D008221 6.9e-110 401.4 363 55.9
Aqoxy7G02243 Aquilegia oxysepala HOM05D006791 ORTHO05D008221 9.0e-110 401.0 369 55.0
PSO339G2849 Papaver somniferum HOM05D006791 ORTHO05D008221 1.2e-109 400.6 359 56.3
Cc02_g11450 Coffea canephora HOM05D006791 ORTHO05D008221 1.5e-109 400.2 399 51.4
VMungo0720G1069 Vigna mungo HOM05D006791 ORTHO05D008221 1.5e-109 400.2 395 51.4
PSO384G4004 Papaver somniferum HOM05D006791 ORTHO05D008221 9.9e-109 397.5 359 55.7
Lsat_1_v5_gn_8_20021 Lactuca sativa HOM05D006791 ORTHO05D008221 1.4e-107 393.7 359 55.4
MSTRG.371 Avicennia marina HOM05D006791 ORTHO05D008221 2.4e-107 392.9 357 54.9
Aa31LG10G7360 Aethionema arabicum HOM05D006791 ORTHO05D008221 3.2e-107 392.5 383 55.1
DCAR_019128 Daucus carota HOM05D006791 ORTHO05D008221 9.3e-107 391.0 342 54.4
TWI15G0354 Tripterygium wilfordii HOM05D006791 ORTHO05D008221 4.6e-106 388.7 360 56.4
CDE09G0276 Ceratophyllum demersum HOM05D006791 ORTHO05D008221 1.7e-105 386.7 370 52.7
BraA03t13977Z Brassica rapa HOM05D006791 ORTHO05D008221 1.1e-104 384.0 388 53.9
BolC7t45202H Brassica oleracea HOM05D006791 ORTHO05D008221 2.8e-103 379.4 395 52.4
A03p48770 Brassica napus HOM05D006791 ORTHO05D008221 8.1e-103 377.9 367 55.9
Atru.chr12.724 Acer truncatum HOM05D006791 ORTHO05D008221 2.9e-100 369.4 367 53.7
Zm00001eb013230 Zea mays HOM05D006791 ORTHO05D008221 1.1e-99 367.5 375 50.4
Peaxi162Scf00108g00912 Petunia axillaris HOM05D006791 ORTHO05D008221 6.0e-98 361.7 363 52.3
Nitab4.5_0000233g0130 Nicotiana tabacum HOM05D006791 ORTHO05D008221 7.9e-98 361.3 341 53.1
unitig_747.g21478 Utricularia gibba HOM05D006791 ORTHO05D008221 1.3e-97 360.5 357 51.5
C07p46860 Brassica napus HOM05D006791 ORTHO05D008221 8.7e-97 357.8 428 48.4
Manes.07G103500 Manihot esculenta HOM05D006791 ORTHO05D008221 8.7e-97 357.8 308 59.4
Sabra08G0028900 Salix brachista HOM05D006791 ORTHO05D008221 2.4e-94 349.7 309 57.3
arahy.Tifrunner.gnm1.ann1.7LH3TR Arachis hypogaea HOM05D002197 ORTHO05D008221 1.2e-93 347.4 315 54.9
TAR633G1431 Trochodendron aralioides HOM05D006791 ORTHO05D008221 9.9e-93 344.4 241 67.6
Sp5g10000 Schrenkiella parvula HOM05D006791 ORTHO05D008221 2.2e-92 343.2 242 70.7
Carub.0005s1862 Capsella rubella HOM05D006791 ORTHO05D008221 8.4e-92 341.3 244 68.0
ATR0759G009 Amborella trichopoda HOM05D006791 ORTHO05D008221 2.7e-90 336.3 343 51.0
AT3G52260 Arabidopsis thaliana HOM05D006791 ORTHO05D008221 1.0e-89 334.3 245 67.8
Ciclev10033672m.g Citrus clementina HOM05D006791 ORTHO05D008221 5.1e-89 332.0 291 59.1
Nitab4.5_0004081g0030 Nicotiana tabacum HOM05D006791 ORTHO05D008221 2.5e-88 329.7 363 49.0
AUR62027952 Chenopodium quinoa HOM05D006791 ORTHO05D008221 6.2e-87 325.1 309 52.4
Sc20g0001960 Simmondsia chinensis HOM05D006791 ORTHO05D008221 3.4e-85 319.3 265 59.2
Pp3c20_1270 Physcomitrium patens HOM05D006791 ORTHO05D008221 5.7e-80 302.0 382 45.8
SMO347G0025 Selaginella moellendorffii HOM05D006791 ORTHO05D008221 4.1e-78 295.8 364 45.3
AagrBONN_evm.TU.Sc2ySwM_344.689 Anthoceros agrestis HOM05D006791 ORTHO05D008221 5.3e-78 295.4 339 46.3
Lj8A97G46 Lonicera japonica HOM05D006791 ORTHO05D008221 6.9e-78 295.0 283 57.2
Mapoly0002s0246 Marchantia polymorpha HOM05D006791 ORTHO05D008221 9.0e-78 294.7 375 43.7
Hund22514 Selenicereus undatus HOM05D006791 ORTHO05D008221 3.7e-71 272.7 240 57.5
CARHR162020 Cardamine hirsuta HOM05D006791 ORTHO05D008221 5.3e-70 268.9 271 53.5
HPP92_001044 Vanilla planifolia HOM05D006791 ORTHO05D008221 6.9e-70 268.5 259 54.1
FAN10G1968 Fragaria x ananassa HOM05D006791 ORTHO05D008221 3.0e-65 253.1 286 50.3
AUR62020760 Chenopodium quinoa HOM05D006791 ORTHO05D008221 3.4e-61 239.6 186 61.3
Ah.10g032870 Amaranthus hybridus HOM05D006791 ORTHO05D008221 2.7e-58 229.9 156 67.9
RcHm_v2.0_Chr5g0046841 Rosa chinensis HOM05D006791 ORTHO05D008221 1.3e-47 194.5 161 62.7
COL.COLO4_23714 Corchorus olitorius HOM05D006791 ORTHO05D008221 2.8e-47 193.4 185 55.7
COL.COLO4_23713 Corchorus olitorius HOM05D006791 ORTHO05D008221 3.4e-40 169.9 176 48.3
PGSC0003DMG401015497 Solanum tuberosum HOM05D006791 ORTHO05D008221 7.0e-38 162.2 169 50.3
Os03g0288500 Oryza sativa ssp. japonica HOM05D006791 ORTHO05D008221 3.8e-36 156.4 119 63.9
RcHm_v2.0_Chr2g0110391 Rosa chinensis HOM05D006791 ORTHO05D008221 1.5e-35 154.5 163 53.4
Cre16.g689100 Chlamydomonas reinhardtii HOM05D006791 ORTHO05D008221 3.0e-33 146.7 359 29.2
SEGI_28811 Sequoiadendron giganteum HOM05D006791 ORTHO05D008221 1.7e-31 141.0 112 58.9
vmacro07081 Vaccinium macrocarpon HOM05D006791 ORTHO05D008221 4.1e-30 136.3 210 40.0
CDE09G1017 Ceratophyllum demersum HOM05D006791 ORTHO05D008221 1.2e-29 134.8 127 52.8
Hma1.2p1_0063F.1_g034360 Hydrangea macrophylla HOM05D006791 ORTHO05D008221 7.3e-27 125.6 156 46.2
Hund22517 Selenicereus undatus HOM05D006791 ORTHO05D008221 3.4e-24 116.7 75 68.0
RcHm_v2.0_Chr2g0104231 Rosa chinensis HOM05D006791 ORTHO05D008221 1.4e-22 111.3 91 62.6
FAN10G1147 Fragaria x ananassa HOM05D006791 ORTHO05D008221 1.9e-22 110.9 73 67.1
SEGI_03069 Sequoiadendron giganteum HOM05D006791 ORTHO05D008221 3.3e-19 100.1 123 47.2
Rhsim03G0124600 Rhododendron simsii HOM05D006791 ORTHO05D008221 1.9e-14 84.3 119 42.0
Zm00001eb333930 Zea mays HOM05D006791 ORTHO05D008221 2.5e-11 73.9 61 62.3
Pp3s46_330 Physcomitrium patens HOM05D007020 ORTHO05D008935 5.6e-11 72.8 289 27.0
TWI38G1326 Tripterygium wilfordii HOM05D006791 ORTHO05D008221 5.6e-11 72.8 161 36.0
Cfa023901 Carpinus fangiana HOM05D005705 ORTHO05D007152 9.5e-11 72.0 225 25.3
Zm00001eb364040 Zea mays HOM05D006791 ORTHO05D008221 3.6e-10 70.1 61 60.7
C02p20570 Brassica napus HOM05D005705 ORTHO05D007152 1.4e-09 68.2 237 25.3
BcaC01g06097 Brassica carinata HOM05D005705 ORTHO05D007152 4.0e-09 66.6 234 23.5
Peaxi162Scf00016g02336 Petunia axillaris HOM05D002827 ORTHO05D003148 4.0e-09 66.6 181 30.4
Solyc01g107580.4 Solanum lycopersicum HOM05D002827 ORTHO05D003148 4.0e-09 66.6 171 31.6
MCO01G778 Micromonas commoda HOM05D007020 ORTHO05D008935 5.2e-09 66.2 185 25.4
BolC3t14305H Brassica oleracea HOM05D005705 ORTHO05D007152 1.2e-08 65.1 237 24.1
Sopen01g049770 Solanum pennellii HOM05D002827 ORTHO05D003148 1.5e-08 64.7 171 31.0
PGSC0003DMG400025766 Solanum tuberosum HOM05D002827 ORTHO05D003148 1.5e-08 64.7 171 30.4
C03p19170 Brassica napus HOM05D005705 ORTHO05D007152 2.6e-08 63.9 237 24.1
THA.LOC104811568 Tarenaya hassleriana HOM05D005705 ORTHO05D007152 3.4e-08 63.5 232 23.7
C08p27510 Brassica napus HOM05D032010 ORTHO05D008221 4.4e-08 63.2 79 45.6
Nitab4.5_0002815g0030 Nicotiana tabacum HOM05D002827 ORTHO05D003148 1.3e-07 61.6 171 30.4
BraA09t39995Z Brassica rapa HOM05D032010 ORTHO05D042096 2.2e-07 60.8 84 44.0
Aa31LG3G7650 Aethionema arabicum HOM05D005705 ORTHO05D007152 2.9e-07 60.5 200 25.5
CAN.G1231.4 Capsicum annuum HOM05D002827 ORTHO05D003148 3.7e-07 60.1 206 27.7
A09p45320 Brassica napus HOM05D032010 ORTHO05D042096 4.9e-07 59.7 86 43.0
CsaV3_7G008150 Cucumis sativus L. HOM05D002827 ORTHO05D003148 6.4e-07 59.3 197 30.5
Migut.N01165 Erythranthe guttata HOM05D002827 ORTHO05D003148 1.4e-06 58.2 126 37.3
GSVIVG01003148001 Vitis vinifera HOM05D002827 ORTHO05D003148 1.4e-06 58.2 180 30.0
Nitab4.5_0004965g0030 Nicotiana tabacum HOM05D002827 ORTHO05D003148 1.9e-06 57.8 146 30.1
SGA_v2.0_scaffold393G50711 Striga asiatica HOM05D002827 ORTHO05D003148 1.9e-06 57.8 166 28.3
unitig_94.g28320 Utricularia gibba HOM05D002827 ORTHO05D003148 1.9e-06 57.8 197 27.9
Gohir.D05G186100 Gossypium hirsutum HOM05D007020 ORTHO05D008935 2.4e-06 57.4 248 22.2
Rhsim06G0012300 Rhododendron simsii HOM05D007020 ORTHO05D008935 2.4e-06 57.4 237 23.6
HanXRQChr05g0146601 Helianthus annuus HOM05D007020 ORTHO05D008935 3.2e-06 57.0 236 23.3
Nitab4.5_0001332g0070 Nicotiana tabacum HOM05D005705 ORTHO05D007152 3.2e-06 57.0 169 24.9
Cc02_g19280 Coffea canephora HOM05D002827 ORTHO05D003148 4.1e-06 56.6 176 26.7
SHI05285 Sapria himalayana HOM05D002827 ORTHO05D003148 4.1e-06 56.6 148 31.8
BcaC08g47097 Brassica carinata HOM05D007020 ORTHO05D008935 5.4e-06 56.2 195 25.1
Dinv15766 Davidia involucrata HOM05D002827 ORTHO05D003148 5.4e-06 56.2 174 29.3
Lsat_1_v5_gn_9_111301 Lactuca sativa HOM05D002827 ORTHO05D003148 5.4e-06 56.2 129 33.3
Atru.chr13.224 Acer truncatum HOM05D007020 ORTHO05D008935 7.1e-06 55.8 235 22.6
Cc10_g01170 Coffea canephora HOM05D007020 ORTHO05D008935 7.1e-06 55.8 212 25.0
CANSAT25G2676 Cannabis sativa HOM05D002827 ORTHO05D003148 9.2e-06 55.5 129 33.3
Gorai.009G191500 Gossypium raimondii HOM05D000059 ORTHO05D008935 9.2e-06 55.5 248 21.8
MCO16G325 Micromonas commoda HOM05D002827 ORTHO05D003148 9.2e-06 55.5 126 31.0
Sed0006233 Sechium edule HOM05D002827 ORTHO05D003148 9.2e-06 55.5 133 29.3
PGSC0003DMG400031733 Solanum tuberosum HOM05D005705 ORTHO05D007152 9.2e-06 55.5 169 24.9


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