Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 1.6e-205 719.2 365 100.0
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 2.3e-162 575.9 396 75.5
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 1.8e-159 566.2 362 80.7
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.2e-158 563.5 365 79.5
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 6.0e-115 418.3 364 63.5
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 4.8e-112 408.7 364 62.4
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 9.0e-111 404.4 363 59.2
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.6e-110 402.9 360 61.4
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 5.8e-110 401.7 307 66.8
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 7.6e-110 401.4 365 61.1
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 7.6e-110 401.4 369 58.5
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 6.4e-109 398.3 363 61.2
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 2.7e-107 392.9 315 63.8
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 1.5e-105 387.1 357 59.1
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 2.5e-105 386.3 315 63.5
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 4.3e-105 385.6 363 57.3
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 5.6e-105 385.2 370 58.6
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 7.4e-105 384.8 324 61.4
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.3e-104 384.0 315 62.9
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 2.1e-104 383.3 369 59.6
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 3.7e-104 382.5 349 59.6
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 8.1e-104 381.3 360 57.5
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 2.6e-102 376.3 369 58.8
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 2.2e-101 373.2 363 57.9
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 6.5e-101 371.7 335 61.2
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 1.1e-100 370.9 412 54.1
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 3.2e-100 369.4 295 64.4
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 3.2e-100 369.4 364 57.7
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.6e-99 367.1 326 60.7
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 2.7e-99 366.3 262 69.8
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 2.7e-99 366.3 299 63.9
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.7e-99 366.3 326 60.1
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 4.6e-99 365.5 366 54.9
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 6.0e-99 365.2 363 56.5
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 3.0e-98 362.8 271 67.5
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 1.9e-97 360.1 318 60.1
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 3.3e-97 359.4 293 63.1
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 4.3e-97 359.0 322 59.6
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 7.4e-97 358.2 299 61.2
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 1.6e-96 357.1 314 59.2
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 2.1e-96 356.7 292 62.7
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 8.2e-96 354.8 350 57.7
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 3.1e-95 352.8 325 58.5
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 3.1e-95 352.8 360 55.3
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 6.9e-95 351.7 285 64.6
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.5e-94 350.5 375 55.7
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 5.8e-94 348.6 314 59.9
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 1.3e-93 347.4 265 65.3
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 5.0e-93 345.5 299 60.5
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 1.4e-92 344.0 307 60.9
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 2.5e-92 343.2 267 64.8
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 1.6e-91 340.5 315 58.1
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 4.6e-91 339.0 302 58.9
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 1.0e-90 337.8 322 55.9
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 2.3e-90 336.7 357 55.5
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 6.7e-90 335.1 367 52.9
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 6.7e-90 335.1 346 55.8
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 6.7e-90 335.1 272 61.8
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 1.5e-89 334.0 360 54.4
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.9e-89 333.6 318 56.6
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 1.9e-89 333.6 367 54.2
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 4.3e-89 332.4 340 53.8
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 4.3e-89 332.4 340 53.8
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.3e-89 332.4 346 55.5
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 5.7e-89 332.0 291 61.2
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 1.6e-88 330.5 353 55.0
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 1.6e-88 330.5 405 50.1
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.2e-88 330.1 344 55.2
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 2.8e-88 329.7 301 59.1
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 3.7e-88 329.3 353 53.5
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 8.2e-88 328.2 304 56.6
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 8.2e-88 328.2 376 52.1
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.1e-87 327.8 341 53.7
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 1.1e-87 327.8 359 53.2
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 2.4e-87 326.6 360 52.8
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 5.3e-87 325.5 318 54.4
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 1.5e-86 323.9 268 63.8
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 2.0e-86 323.6 294 60.5
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 5.9e-86 322.0 379 50.4
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 7.7e-86 321.6 236 69.1
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 7.7e-86 321.6 236 69.1
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.3e-85 320.9 359 53.2
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 2.9e-85 319.7 265 62.3
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 3.8e-85 319.3 237 67.9
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 6.5e-85 318.5 262 61.5
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 2.5e-84 316.6 339 51.6
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 4.2e-84 315.8 216 71.3
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 1.2e-83 314.3 236 65.7
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 1.6e-83 313.9 266 60.9
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 1.6e-83 313.9 230 66.1
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 3.6e-83 312.8 231 67.1
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 3.6e-83 312.8 291 59.1
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 3.6e-83 312.8 246 65.0
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 1.0e-82 311.2 221 69.7
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 3.9e-82 309.3 256 62.1
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 6.7e-82 308.5 320 54.4
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.0e-81 307.0 218 69.3
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 3.3e-81 306.2 262 60.3
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 9.7e-81 304.7 236 64.0
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 9.1e-79 298.1 256 60.5
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 1.2e-78 297.7 258 60.1
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 3.8e-77 292.7 180 79.4
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 1.4e-74 284.3 232 65.5
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 8.8e-74 281.6 193 71.5
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 2.0e-70 270.4 188 72.9
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 5.9e-70 268.9 249 56.6
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 2.2e-64 250.4 276 50.4
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 6.3e-64 248.8 265 49.8
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 1.3e-61 241.1 153 77.8
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 1.7e-61 240.7 235 51.1
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 1.7e-61 240.7 213 55.9
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 9.4e-52 208.4 121 81.8
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 1.2e-51 208.0 276 44.2
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 2.7e-51 206.8 245 46.5
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 4.0e-50 203.0 169 57.4
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.7e-48 197.6 264 46.2
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 4.9e-48 196.1 103 87.4
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.6e-46 191.0 181 55.8
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 7.8e-30 135.6 69 87.0
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 1.3e-29 134.8 79 75.9
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 1.2e-22 111.7 185 42.7
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 6.0e-14 82.8 61 63.9
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 2.4e-10 70.9 138 32.6
BcaC07g39055 Brassica carinata HOM05D005712 ORTHO05D032168 4.2e-07 60.1 155 29.0
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 1.6e-06 58.2 43 65.1
C08p20390 Brassica napus HOM05D005712 ORTHO05D032168 6.0e-06 56.2 139 33.1


User provided reference genes

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