Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 5.0e-125 451.1 218 100.0
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 9.5e-92 340.5 231 71.9
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 3.7e-88 328.6 217 71.9
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 3.5e-62 242.3 212 57.5
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 9.6e-60 234.2 213 55.4
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 1.3e-59 233.8 210 54.3
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 8.1e-59 231.1 212 54.7
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 1.4e-58 230.3 214 55.6
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 1.8e-58 229.9 212 54.2
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 1.8e-58 229.9 216 52.3
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 3.1e-58 229.2 212 54.7
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 9.0e-58 227.6 212 54.7
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 2.6e-57 226.1 213 53.5
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 2.6e-57 226.1 212 53.3
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 5.8e-57 224.9 212 52.4
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 1.3e-56 223.8 212 51.9
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 2.2e-56 223.0 211 51.7
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 3.8e-56 222.2 213 52.6
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 4.9e-56 221.9 214 51.9
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 1.4e-55 220.3 213 53.1
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.9e-55 219.9 215 53.5
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 2.4e-55 219.5 212 53.3
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 4.2e-55 218.8 215 51.6
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 4.2e-55 218.8 212 50.0
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 5.5e-55 218.4 215 53.0
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 7.1e-55 218.0 212 51.4
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 7.1e-55 218.0 216 52.3
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 9.3e-55 217.6 212 51.4
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 9.3e-55 217.6 212 51.4
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 1.2e-54 217.2 212 50.0
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 2.1e-54 216.5 213 51.6
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 2.1e-54 216.5 215 51.6
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.0e-53 214.2 216 49.1
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.3e-53 213.8 207 51.2
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 2.3e-53 213.0 212 50.9
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 2.3e-53 213.0 213 51.6
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 2.3e-53 213.0 213 51.2
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 3.0e-53 212.6 218 49.5
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 5.1e-53 211.8 213 48.4
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 5.1e-53 211.8 211 50.2
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 1.1e-52 210.7 217 51.6
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 1.1e-52 210.7 217 51.6
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 3.3e-52 209.1 172 61.6
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.3e-52 209.1 215 53.0
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 5.6e-52 208.4 212 48.6
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 5.6e-52 208.4 212 48.1
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 5.6e-52 208.4 213 50.7
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 9.6e-52 207.6 214 49.5
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 2.1e-51 206.5 215 52.6
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.8e-51 206.1 215 52.1
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 3.7e-51 205.7 215 50.7
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 3.7e-51 205.7 215 52.1
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 4.8e-51 205.3 215 51.6
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 6.2e-51 204.9 215 51.6
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.1e-50 204.1 215 50.2
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.8e-50 203.4 212 47.2
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 4.0e-50 202.2 206 50.5
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 5.3e-50 201.8 210 50.0
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 6.9e-50 201.4 219 48.4
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 9.0e-50 201.1 214 49.1
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 2.6e-49 199.5 213 48.4
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.9e-48 196.1 214 48.6
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 2.9e-48 196.1 213 48.4
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 6.5e-48 194.9 213 47.4
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 9.3e-47 191.0 195 49.2
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 1.1e-44 184.1 221 45.7
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 4.1e-42 175.6 218 42.7
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 1.3e-40 170.6 216 42.6
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 1.3e-40 170.6 234 41.5
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 5.0e-40 168.7 203 41.4
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 1.9e-39 166.8 169 48.5
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 5.5e-39 165.2 215 43.7
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 1.2e-38 164.1 207 43.5
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 1.2e-38 164.1 227 39.6
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.1e-38 163.3 212 36.8
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 3.6e-38 162.5 211 42.7
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 5.1e-37 158.7 153 51.6
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 1.9e-36 156.8 219 39.3
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.9e-36 156.8 163 50.3
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 1.9e-36 156.8 158 50.0
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 3.3e-36 156.0 230 40.9
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 6.3e-35 151.8 152 51.3
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 7.7e-33 144.8 212 36.3
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.3e-32 144.1 212 34.4
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 2.6e-25 119.8 135 48.1
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 1.1e-23 114.4 129 48.8
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 6.3e-19 98.6 96 46.9
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 2.9e-16 89.7 77 54.5
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 7.5e-12 75.1 85 40.0


User provided reference genes

Program Settings