Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012336 Sechium edule HOM05D008345 ORTHO05D010179 7.8e-38 161.0 165 100.0
ClCG07G014060 Citrullus lanatus HOM05D008345 ORTHO05D010179 2.1e-14 83.2 175 71.4
MELO3C025805.2 Cucumis melo HOM05D008345 ORTHO05D010179 2.1e-14 83.2 172 64.0
CsaV3_3G031340 Cucumis sativus L. HOM05D008345 ORTHO05D010179 1.0e-13 80.9 54 74.1
Ciclev10026572m.g Citrus clementina HOM05D008345 ORTHO05D010179 3.4e-09 65.9 47 66.0
Nn6g35611 Nelumbo nucifera HOM05D008345 ORTHO05D010179 8.4e-08 61.2 49 55.1
Cpa.g.sc25.117 Carica papaya HOM05D008345 ORTHO05D010179 1.1e-07 60.8 43 72.1
Cfa003533 Carpinus fangiana HOM05D008345 ORTHO05D010179 1.1e-07 60.8 44 68.2
Nn8g38674 Nelumbo nucifera HOM05D042106 ORTHO05D010179 1.4e-07 60.5 43 60.5
RcHm_v2.0_Chr2g0145371 Rosa chinensis HOM05D008345 ORTHO05D010179 1.9e-07 60.1 44 70.5
FAN09G3851 Fragaria x ananassa HOM05D008345 ORTHO05D010179 2.5e-07 59.7 43 62.8
FvH4_6g34720 Fragaria vesca HOM05D008345 ORTHO05D010179 4.2e-07 58.9 44 65.9
FAN14G1116 Fragaria x ananassa HOM05D008345 ORTHO05D010179 4.2e-07 58.9 43 65.1
CiPaw.01G218600 Carya illinoinensis HOM05D008345 ORTHO05D010179 5.5e-07 58.5 48 62.5
Prupe.3G041900 Prunus persica HOM05D008345 ORTHO05D010179 1.2e-06 57.4 44 68.2
PGR119G1016 Punica granatum HOM05D008345 ORTHO05D010179 1.2e-06 57.4 48 64.6
CANSAT56G1799 Cannabis sativa HOM05D008345 ORTHO05D010179 1.6e-06 57.0 45 62.2
Lj3g0003445 Lotus japonicus HOM05D008345 ORTHO05D010179 1.6e-06 57.0 45 60.0
Lj4g0027375 Lotus japonicus HOM05D008345 ORTHO05D010179 1.6e-06 57.0 45 60.0
Potri.003G064900 Populus trichocarpa HOM05D008345 ORTHO05D010179 1.6e-06 57.0 44 61.4
QL05p007306 Quercus lobata HOM05D008345 ORTHO05D010179 2.1e-06 56.6 43 65.1
FAN02G4084 Fragaria x ananassa HOM05D008345 ORTHO05D010179 2.7e-06 56.2 40 65.0
FAN05G3870 Fragaria x ananassa HOM05D008345 ORTHO05D010179 2.7e-06 56.2 40 65.0
Duzib160G0403 Durio zibethinus HOM05D008345 ORTHO05D010179 3.5e-06 55.8 44 63.6
Duzib192G0347 Durio zibethinus HOM05D008345 ORTHO05D010179 4.6e-06 55.5 44 61.4
TWI79G1189 Tripterygium wilfordii HOM05D008345 ORTHO05D010179 4.6e-06 55.5 41 63.4
Glyma.16G007500 Glycine max HOM05D008345 ORTHO05D010179 6.0e-06 55.1 46 58.7
Glyma.07G038300 Glycine max HOM05D008345 ORTHO05D010179 7.9e-06 54.7 45 60.0
Sabra03G0038200 Salix brachista HOM05D008345 ORTHO05D010179 7.9e-06 54.7 40 65.0


User provided reference genes

Program Settings