Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012310 Sechium edule HOM05D024756 ORTHO05D005639 3.9e-84 315.5 262 100.0
CsaV3_6G031720 Cucumis sativus L. HOM05D024756 ORTHO05D028899 1.2e-16 91.3 202 66.3
Sed0026618 Sechium edule HOM05D024756 ORTHO05D028899 1.1e-14 84.7 89 75.3
Dinv39575 Davidia involucrata HOM05D008201 ORTHO05D005639 2.4e-12 77.0 189 57.1
Potri.005G248100 Populus trichocarpa HOM05D008201 ORTHO05D005639 5.3e-12 75.9 203 54.7
Actinidia17030 Actinidia chinensis HOM05D000356 ORTHO05D000265 1.3e-10 71.2 182 52.2
TAR381G0904 Trochodendron aralioides HOM05D008201 ORTHO05D005639 1.4e-09 67.8 193 59.6
CSS0003901 Camellia sinensis var. sinensis HOM05D008201 ORTHO05D005639 4.2e-09 66.2 181 47.5
Dinv31918 Davidia involucrata HOM05D008201 ORTHO05D005639 5.4e-09 65.9 193 57.0
TAR376G0148 Trochodendron aralioides HOM05D008201 ORTHO05D005639 5.4e-09 65.9 211 45.5
Lj4A14T47 Lonicera japonica HOM05D008201 ORTHO05D005639 1.2e-08 64.7 188 31.9
TAR628G0948 Trochodendron aralioides HOM05D008201 ORTHO05D005639 1.6e-08 64.3 187 56.1
TWI36G0214 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 3.5e-08 63.2 167 64.7
Gohir.A01G107800 Gossypium hirsutum HOM05D008201 ORTHO05D005639 4.6e-08 62.8 187 44.4
Hma1.2p1_1100F.1_g257080 Hydrangea macrophylla HOM05D008201 ORTHO05D005639 7.8e-08 62.0 176 58.0
Aqoxy6G01838 Aquilegia oxysepala HOM05D008201 ORTHO05D005639 1.0e-07 61.6 208 35.1
CiPaw.08G071500 Carya illinoinensis HOM05D008201 ORTHO05D005639 1.3e-07 61.2 197 41.6
FAN27G2977 Fragaria x ananassa HOM05D008201 ORTHO05D005639 1.3e-07 61.2 237 48.5
CiPaw.07G140900 Carya illinoinensis HOM05D008201 ORTHO05D005639 3.9e-07 59.7 195 58.5
Gohir.D01G094300 Gossypium hirsutum HOM05D008201 ORTHO05D005639 3.9e-07 59.7 187 47.1
TWI12G0216 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 3.9e-07 59.7 163 58.3
Cfa014040 Carpinus fangiana HOM05D025300 ORTHO05D005639 6.6e-07 58.9 50 66.0
Sabra05G0191700 Salix brachista HOM05D008201 ORTHO05D005639 1.5e-06 57.8 166 35.5
Haze_22743 Corylus avellana HOM05D025300 ORTHO05D005639 2.5e-06 57.0 50 64.0
Ciclev10002349m.g Citrus clementina HOM05D008201 ORTHO05D005639 3.3e-06 56.6 52 59.6
FvH4_2g37690 Fragaria vesca HOM05D008201 ORTHO05D005639 4.3e-06 56.2 237 49.4
Gorai.002G119600 Gossypium raimondii HOM05D008201 ORTHO05D005639 5.6e-06 55.8 187 46.5
Prupe.1G356400 Prunus persica HOM05D008201 ORTHO05D005639 9.6e-06 55.1 170 50.0


User provided reference genes

Program Settings