Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012210 Sechium edule HOM05D004182 ORTHO05D007321 4.0e-26 120.6 57 100.0
Sed0024115 Sechium edule HOM05D004182 ORTHO05D007321 7.2e-15 83.2 57 78.9
Gohir.D05G169433 Gossypium hirsutum HOM05D004182 ORTHO05D007321 1.4e-13 79.0 69 65.2
Hma1.2p1_1418F.1_g282260 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 1.8e-13 78.6 69 63.8
Nn064s42221 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.8e-13 78.6 69 66.7
Nn349s46475 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.8e-13 78.6 69 66.7
Nn403s46571 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.8e-13 78.6 69 66.7
Nn4g25379 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.8e-13 78.6 69 66.7
Gohir.A12G165450 Gossypium hirsutum HOM05D004182 ORTHO05D007321 3.0e-13 77.8 69 66.7
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 3.9e-13 77.4 63 68.3
Gohir.1Z051066 Gossypium hirsutum HOM05D004182 ORTHO05D007321 6.7e-13 76.6 69 66.7
Gohir.A04G039255 Gossypium hirsutum HOM05D004182 ORTHO05D007321 6.7e-13 76.6 69 66.7
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 8.8e-13 76.3 68 64.7
Gohir.1Z049982 Gossypium hirsutum HOM05D004182 ORTHO05D007321 8.8e-13 76.3 69 65.2
arahy.Tifrunner.gnm1.ann1.73L6LP Arachis hypogaea HOM05D004182 ORTHO05D007321 1.1e-12 75.9 69 62.3
Sopen06g015050 Solanum pennellii HOM05D004182 ORTHO05D007321 1.5e-12 75.5 70 64.3
Sopen09g020810 Solanum pennellii HOM05D004182 ORTHO05D007321 1.5e-12 75.5 70 64.3
arahy.Tifrunner.gnm1.ann1.DWP51K Arachis hypogaea HOM05D000963 ORTHO05D007321 1.9e-12 75.1 68 61.8
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.9e-12 75.1 68 61.8
arahy.Tifrunner.gnm1.ann1.TV6F30 Arachis hypogaea HOM05D004182 ORTHO05D007321 1.9e-12 75.1 68 61.8
BcaC04g20782 Brassica carinata HOM05D004182 ORTHO05D007321 3.3e-12 74.3 69 62.3
CARHR282390 Cardamine hirsuta HOM05D004182 ORTHO05D007321 3.3e-12 74.3 69 62.3
CARHR282490 Cardamine hirsuta HOM05D004182 ORTHO05D007321 3.3e-12 74.3 69 62.3
arahy.Tifrunner.gnm1.ann1.UTH6FS Arachis hypogaea HOM05D004182 ORTHO05D007321 4.3e-12 73.9 69 60.9
BolSC29t60499H Brassica oleracea HOM05D004182 ORTHO05D007321 4.3e-12 73.9 68 61.8
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 4.3e-12 73.9 68 61.8
BolSC29t60624H Brassica oleracea HOM05D004182 ORTHO05D007321 4.3e-12 73.9 68 61.8
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 4.3e-12 73.9 68 61.8
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 4.3e-12 73.9 68 61.8
BolSC47t61059H Brassica oleracea HOM05D004182 ORTHO05D007321 4.3e-12 73.9 68 61.8
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 4.3e-12 73.9 68 61.8
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 4.3e-12 73.9 68 61.8
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 4.3e-12 73.9 68 61.8
Nn031s41606 Nelumbo nucifera HOM05D004182 ORTHO05D007321 4.3e-12 73.9 70 65.7
Lsat_1_v5_gn_0_47640 Lactuca sativa HOM05D004182 ORTHO05D007321 5.7e-12 73.6 67 64.2
EL10Ac7g17372 Beta vulgaris HOM05D004182 ORTHO05D007321 7.4e-12 73.2 69 62.3
EL10As10g23966 Beta vulgaris HOM05D004182 ORTHO05D007321 7.4e-12 73.2 69 62.3
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 7.4e-12 73.2 69 59.4
arahy.Tifrunner.gnm1.ann1.04MME8 Arachis hypogaea HOM05D004182 ORTHO05D007321 9.7e-12 72.8 68 60.3
arahy.Tifrunner.gnm1.ann1.MI7UCB Arachis hypogaea HOM05D004182 ORTHO05D007321 9.7e-12 72.8 68 60.3
arahy.Tifrunner.gnm1.ann1.NV4G0I Arachis hypogaea HOM05D004182 ORTHO05D007321 1.3e-11 72.4 69 60.9
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 1.3e-11 72.4 68 61.8
VMungo0942G0003 Vigna mungo HOM05D004182 ORTHO05D007321 1.3e-11 72.4 68 61.8
Sopen10g016590 Solanum pennellii HOM05D004182 ORTHO05D007321 2.2e-11 71.6 70 61.4
Psat7g033600 Pisum sativum HOM05D004182 ORTHO05D007321 3.7e-11 70.9 69 62.3
Sed0007203 Sechium edule HOM05D004182 ORTHO05D007321 4.8e-11 70.5 69 59.4
Sed0018388 Sechium edule HOM05D004182 ORTHO05D007321 4.8e-11 70.5 69 59.4
Sed0018833 Sechium edule HOM05D004182 ORTHO05D007321 4.8e-11 70.5 69 59.4
Sed0022676 Sechium edule HOM05D004182 ORTHO05D007321 4.8e-11 70.5 69 59.4
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 6.3e-11 70.1 68 58.8
BraSC58t46455Z Brassica rapa HOM05D004182 ORTHO05D007321 8.2e-11 69.7 68 58.8
Psat5g118800 Pisum sativum HOM05D004182 ORTHO05D007321 1.1e-10 69.3 68 60.3
SHI36542 Sapria himalayana HOM05D004182 ORTHO05D007321 1.1e-10 69.3 66 62.1
BraSC179t45780Z Brassica rapa HOM05D004182 ORTHO05D007321 1.4e-10 68.9 64 60.9
Hma1.2p1_0043F.1_g025830 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 1.4e-10 68.9 68 54.4
Psat0s9163g0080 Pisum sativum HOM05D004182 ORTHO05D007321 1.4e-10 68.9 68 61.8
Nn219s45281 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.8e-10 68.6 62 64.5
Nn442s46688 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.8e-10 68.6 62 64.5
arahy.Tifrunner.gnm1.ann1.8WTZ4N Arachis hypogaea HOM05D004182 ORTHO05D007321 2.4e-10 68.2 68 57.4
Glyma.09G133950 Glycine max HOM05D004182 ORTHO05D007321 4.1e-10 67.4 69 55.1
arahy.Tifrunner.gnm1.ann1.GMF9U8 Arachis hypogaea HOM05D004182 ORTHO05D007321 5.3e-10 67.0 68 57.4
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 1.2e-09 65.9 69 56.5
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 4.5e-09 63.9 68 57.4
Hma1.2p1_0594F.1_g185812 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 4.5e-09 63.9 68 55.9
Psat0s2011g0080 Pisum sativum HOM05D004182 ORTHO05D007321 1.7e-08 62.0 67 58.2
PGSC0003DMG400043035 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.7e-08 62.0 64 60.9
CARHR044290 Cardamine hirsuta HOM05D004182 ORTHO05D007321 2.9e-08 61.2 61 57.4
Psat5g167880 Pisum sativum HOM05D000009 ORTHO05D000008 5.0e-08 60.5 68 54.4
Gohir.D13G041550 Gossypium hirsutum HOM05D004182 ORTHO05D007321 8.5e-08 59.7 69 55.1
Sc14g0004760 Simmondsia chinensis HOM05D004182 ORTHO05D007321 1.1e-07 59.3 63 57.1
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 1.1e-07 59.3 67 56.7
arahy.Tifrunner.gnm1.ann1.096T0J Arachis hypogaea HOM05D004182 ORTHO05D007321 1.9e-07 58.5 67 55.2
arahy.Tifrunner.gnm1.ann1.5LT2YD Arachis hypogaea HOM05D000580 ORTHO05D007321 1.9e-07 58.5 65 52.3
EL10Ac8g19701 Beta vulgaris HOM05D004182 ORTHO05D007321 2.5e-07 58.2 63 55.6
Nn070s42382 Nelumbo nucifera HOM05D004182 ORTHO05D007321 2.5e-07 58.2 58 60.3
arahy.Tifrunner.gnm1.ann1.S1ZEXT Arachis hypogaea HOM05D004182 ORTHO05D007321 7.2e-07 56.6 57 56.1
PGSC0003DMG400027964 Solanum tuberosum HOM05D004182 ORTHO05D007321 7.2e-07 56.6 26 100.0
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 9.4e-07 56.2 25 100.0
BolSC49t61151H Brassica oleracea HOM05D004182 ORTHO05D007321 9.4e-07 56.2 25 100.0
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 9.4e-07 56.2 25 100.0
Cpa.g.c43052.1 Carica papaya HOM05D004182 ORTHO05D007321 9.4e-07 56.2 25 100.0
Nn029s41584 Nelumbo nucifera HOM05D004182 ORTHO05D007321 9.4e-07 56.2 25 100.0
Nn212s45203 Nelumbo nucifera HOM05D004182 ORTHO05D007321 9.4e-07 56.2 25 100.0
Nn264s45947 Nelumbo nucifera HOM05D004182 ORTHO05D007321 9.4e-07 56.2 25 100.0
Nn304s46229 Nelumbo nucifera HOM05D004182 ORTHO05D007321 9.4e-07 56.2 25 100.0
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 9.4e-07 56.2 25 100.0
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 9.4e-07 56.2 25 100.0
Sc21g0003840 Simmondsia chinensis HOM05D004182 ORTHO05D007321 9.4e-07 56.2 25 100.0
PGSC0003DMG400027965 Solanum tuberosum HOM05D004182 ORTHO05D007321 9.4e-07 56.2 25 100.0
PGSC0003DMG400041917 Solanum tuberosum HOM05D004182 ORTHO05D007321 9.4e-07 56.2 25 100.0
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 2.1e-06 55.1 25 96.0
Sc03g0005670 Simmondsia chinensis HOM05D004182 ORTHO05D007321 7.9e-06 53.1 58 56.9


User provided reference genes

Program Settings