Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 3.5e-71 271.6 141 100.0
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 2.4e-56 222.2 141 83.0
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 1.6e-55 219.5 141 82.3
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 7.4e-53 210.7 137 81.0
Haze_12411 Corylus avellana HOM05D007500 ORTHO05D009197 3.3e-45 185.3 129 71.3
Cfa009364 Carpinus fangiana HOM05D007500 ORTHO05D009197 7.6e-42 174.1 129 69.0
CANSAT01G0539 Cannabis sativa HOM05D007500 ORTHO05D009197 8.4e-41 170.6 141 64.5
CiPaw.05G110500 Carya illinoinensis HOM05D007500 ORTHO05D009197 1.2e-39 166.8 128 67.2
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 2.7e-39 165.6 141 58.9
QL93p2010_0098 Quercus lobata HOM05D007500 ORTHO05D009197 3.5e-39 165.2 129 66.7
Duzib268G0307 Durio zibethinus HOM05D007500 ORTHO05D009197 1.0e-38 163.7 144 58.3
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 1.3e-38 163.3 133 65.4
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 1.8e-38 162.9 141 60.3
QL03p052860 Quercus lobata HOM05D007500 ORTHO05D009197 1.8e-38 162.9 129 65.9
QL03p053117 Quercus lobata HOM05D007500 ORTHO05D009197 1.8e-38 162.9 129 65.9
COL.COLO4_20391 Corchorus olitorius HOM05D007500 ORTHO05D009197 3.0e-38 162.2 144 57.6
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 8.7e-38 160.6 131 66.4
Gohir.A03G126600 Gossypium hirsutum HOM05D007500 ORTHO05D009197 1.1e-37 160.2 144 58.3
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 5.7e-37 157.9 144 56.9
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 5.7e-37 157.9 144 56.9
Sabra01G0039500 Salix brachista HOM05D007500 ORTHO05D009197 7.4e-37 157.5 118 66.9
Potri.001G055000 Populus trichocarpa HOM05D007500 ORTHO05D009197 9.6e-37 157.1 118 66.9
THA.LOC104814194 Tarenaya hassleriana HOM05D007500 ORTHO05D009197 9.6e-37 157.1 132 63.6
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 1.6e-36 156.4 121 66.9
Nn5g28851 Nelumbo nucifera HOM05D007500 ORTHO05D009197 1.6e-36 156.4 136 62.5
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 2.8e-36 155.6 140 59.3
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 4.8e-36 154.8 127 62.2
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 8.2e-36 154.1 140 59.3
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 1.1e-35 153.7 136 61.0
FAN12G0274 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.4e-35 153.3 138 58.7
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 1.8e-35 152.9 122 61.5
FvH4_4g23840 Fragaria vesca HOM05D007500 ORTHO05D009197 2.4e-35 152.5 138 58.0
PGSC0003DMG400029106 Solanum tuberosum HOM05D007500 ORTHO05D009197 4.1e-35 151.8 122 61.5
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 6.9e-35 151.0 140 57.1
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 2.0e-34 149.4 122 59.8
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 3.4e-34 148.7 122 59.8
Aa31LG9G13320 Aethionema arabicum HOM05D007500 ORTHO05D009197 4.5e-34 148.3 133 62.4
FAN17G2194 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.0e-33 147.1 125 60.8
FAN07G2442 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.3e-33 146.7 138 56.5
FAN22G1415 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.3e-33 146.7 125 60.8
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 1.7e-33 146.4 132 62.1
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 1.7e-33 146.4 141 56.7
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 2.2e-33 146.0 128 63.3
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 2.9e-33 145.6 138 56.5
Thecc.02G209700 Theobroma cacao HOM05D007500 ORTHO05D009197 2.9e-33 145.6 128 57.8
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 3.8e-33 145.2 128 59.4
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 1.1e-32 143.7 124 55.6
Nitab4.5_0000861g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 4.2e-32 141.7 114 62.3
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 5.5e-32 141.4 127 59.8
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 9.3e-32 140.6 137 58.4
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 1.6e-31 139.8 127 60.6
MBI01_g29007_MAGBIO Magnolia biondii HOM05D007500 ORTHO05D009197 1.6e-31 139.8 130 56.2
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 2.1e-31 139.4 134 56.7
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 2.7e-31 139.0 138 59.4
AL8G17240 Arabidopsis lyrata HOM05D007500 ORTHO05D009197 3.6e-31 138.7 136 57.4
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 6.1e-31 137.9 128 61.7
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 1.3e-30 136.7 128 60.2
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 1.3e-30 136.7 128 60.2
Prupe.1G226700 Prunus persica HOM05D007500 ORTHO05D009197 1.8e-30 136.3 134 56.0
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 1.8e-30 136.3 126 61.9
RcHm_v2.0_Chr4g0430411 Rosa chinensis HOM05D007500 ORTHO05D009197 1.8e-30 136.3 119 58.8
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 3.0e-30 135.6 122 60.7
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 3.0e-30 135.6 128 60.2
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 3.0e-30 135.6 128 60.2
Carub.0008s0545 Capsella rubella HOM05D007500 ORTHO05D009197 3.9e-30 135.2 129 59.7
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 6.7e-30 134.4 130 56.9
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 6.7e-30 134.4 127 58.3
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 8.7e-30 134.0 128 61.7
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 1.9e-29 132.9 128 60.2
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 1.9e-29 132.9 115 57.4
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 3.3e-29 132.1 128 59.4
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 4.3e-29 131.7 132 56.1
DCAR_031200 Daucus carota HOM05D007500 ORTHO05D009197 5.7e-29 131.3 126 53.2
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 1.3e-28 130.2 128 58.6
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 1.3e-28 130.2 128 58.6
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 2.8e-28 129.0 131 55.0
Migut.K00728 Erythranthe guttata HOM05D007500 ORTHO05D009197 2.8e-28 129.0 118 60.2
SGA_v2.0_scaffold9G04716 Striga asiatica HOM05D007500 ORTHO05D009197 4.8e-28 128.3 138 53.6
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 6.3e-28 127.9 125 58.4
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 8.2e-28 127.5 122 56.6
CAN.G43.17 Capsicum annuum HOM05D007500 ORTHO05D009197 4.1e-27 125.2 105 61.9
HanXRQChr09g0258281 Helianthus annuus HOM05D007500 ORTHO05D009197 4.1e-27 125.2 129 51.2
Lj6g0001546 Lotus japonicus HOM05D007500 ORTHO05D009197 6.9e-27 124.4 127 55.9
Lalb_Chr08g0230661 Lupinus albus HOM05D007500 ORTHO05D009197 9.1e-27 124.0 129 55.0
MD16G1118400 Malus domestica HOM05D007500 ORTHO05D009197 9.1e-27 124.0 133 50.4
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 9.1e-27 124.0 110 62.7
ECA233G2547 Erigeron canadensis HOM05D007500 ORTHO05D009197 2.0e-26 122.9 106 57.5
MD13G1118300 Malus domestica HOM05D007500 ORTHO05D009197 2.6e-26 122.5 132 51.5
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 7.7e-26 120.9 142 48.6
SalBow2G0500 Salvia bowleyana HOM05D007500 ORTHO05D009197 5.0e-25 118.2 109 61.5
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 1.9e-24 116.3 120 51.7
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 7.2e-24 114.4 122 54.1
PSO675G4883 Papaver somniferum HOM05D007500 ORTHO05D009197 7.2e-24 114.4 104 55.8
CDE06G2379 Ceratophyllum demersum HOM05D007500 ORTHO05D009197 1.8e-22 109.8 132 47.7
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 6.9e-19 97.8 134 43.3
HPP92_002864 Vanilla planifolia HOM05D007500 ORTHO05D009197 2.0e-18 96.3 102 52.9
Os01g0183400 Oryza sativa ssp. japonica HOM05D007500 ORTHO05D009197 4.7e-15 85.1 119 41.2
SEGI_35529 Sequoiadendron giganteum HOM05D007500 ORTHO05D009197 1.1e-11 73.9 88 43.2
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 7.0e-11 71.2 56 64.3
Pp3c13_23370 Physcomitrium patens HOM05D020496 ORTHO05D009197 3.6e-07 58.9 84 38.1
Pp3c13_23373 Physcomitrium patens HOM05D020496 ORTHO05D009197 3.6e-07 58.9 84 38.1
SMO358G0741 Selaginella moellendorffii HOM05D020496 ORTHO05D009197 2.3e-06 56.2 80 38.8


User provided reference genes

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