Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 3.5e-73 278.1 133 100.0
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 1.0e-67 260.0 131 95.4
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 2.9e-67 258.5 131 94.7
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 2.9e-67 258.5 130 94.6
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 2.9e-67 258.5 130 94.6
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 4.9e-67 257.7 131 93.9
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 6.5e-67 257.3 131 94.7
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 6.5e-67 257.3 131 94.7
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 6.5e-67 257.3 131 94.7
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 6.5e-67 257.3 131 94.7
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 5.5e-66 254.2 131 93.9
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 5.5e-66 254.2 131 93.9
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 5.5e-66 254.2 131 93.9
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 5.5e-66 254.2 131 93.9
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 5.5e-66 254.2 131 93.9
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 5.5e-66 254.2 131 93.9
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 5.5e-66 254.2 131 93.9
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 5.5e-66 254.2 131 93.9
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 5.5e-66 254.2 131 93.9
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 5.5e-66 254.2 131 93.1
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 5.5e-66 254.2 130 93.1
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 5.5e-66 254.2 132 93.2
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 5.5e-66 254.2 132 93.2
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 9.3e-66 253.4 131 93.1
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 9.3e-66 253.4 131 93.1
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 1.2e-65 253.1 131 93.1
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 6.0e-65 250.8 131 92.4
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 7.9e-65 250.4 132 93.2
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.8e-64 249.2 131 92.4
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 3.9e-64 248.1 127 93.7
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 6.7e-64 247.3 132 90.9
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.7e-64 246.9 127 92.9
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 1.9e-63 245.7 132 90.2
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 5.7e-63 244.2 130 90.8
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 7.4e-63 243.8 128 91.4
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 7.4e-63 243.8 128 91.4
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 6.9e-61 237.3 123 92.7
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.9e-59 231.9 122 89.3
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 8.5e-59 230.3 125 89.6
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 1.4e-58 229.6 131 86.3
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.4e-58 229.6 132 86.4
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 5.5e-58 227.6 131 84.7
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 1.6e-57 226.1 134 85.1
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.7e-57 225.3 117 93.2
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.7e-57 225.3 117 93.2
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.0e-56 221.9 129 80.6
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.5e-55 219.5 122 86.9
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 6.3e-54 214.2 117 88.0
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 6.3e-54 214.2 127 81.9
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 7.7e-52 207.2 114 89.5
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 2.9e-51 205.3 106 92.5
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.0e-51 204.5 131 78.6
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 1.9e-50 202.6 106 92.5
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 4.2e-50 201.4 144 74.3
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 5.5e-50 201.1 110 89.1
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.4e-48 196.4 109 88.1
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.8e-48 196.1 106 89.6
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 1.8e-48 196.1 110 87.3
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.1e-48 194.5 106 88.7
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.5e-47 193.0 106 86.8
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 5.7e-47 191.0 125 78.4
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 7.4e-47 190.7 121 79.3
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-46 189.9 106 85.8
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 2.2e-46 189.1 106 86.8
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 3.7e-46 188.3 107 86.9
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 3.7e-46 188.3 107 86.9
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 1.8e-45 186.0 101 91.1
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.1e-45 183.7 101 89.1
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 2.0e-44 182.6 131 73.3
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 4.5e-44 181.4 131 71.0
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 7.7e-44 180.6 97 91.8
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.2e-41 173.3 99 83.8
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.2e-41 173.3 99 83.8
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 4.7e-41 171.4 90 91.1
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 1.0e-40 170.2 88 92.0
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.4e-40 169.9 99 82.8
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.4e-40 169.9 99 82.8
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.4e-40 169.9 99 82.8
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-40 169.1 90 90.0
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-40 169.1 90 90.0
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-40 169.1 90 90.0
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-40 169.1 90 90.0
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-40 169.1 90 90.0
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-40 169.1 90 90.0
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-40 169.1 90 90.0
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-40 169.1 90 90.0
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-40 169.1 90 90.0
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-40 169.1 90 90.0
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 6.7e-40 167.5 90 88.9
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-39 166.8 90 88.9
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.5e-39 166.4 106 80.2
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 1.7e-38 162.9 95 80.0
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-37 160.2 89 89.9
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 4.5e-36 154.8 91 86.8
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 5.9e-36 154.5 80 91.2
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-35 152.9 81 88.9
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-35 152.9 81 88.9
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-35 152.9 81 88.9
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-35 152.9 81 88.9
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-35 152.9 81 88.9
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 5.5e-34 147.9 87 81.6
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 1.6e-33 146.4 80 86.2
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 2.1e-33 146.0 77 88.3
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 2.1e-33 146.0 76 86.8
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 2.1e-33 146.0 76 86.8
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 4.7e-33 144.8 89 77.5
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 8.0e-33 144.1 80 85.0
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 1.4e-32 143.3 95 78.9
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 4.0e-32 141.7 91 82.4
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-31 139.4 81 80.2
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 7.5e-31 137.5 76 85.5
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.8e-30 135.6 79 86.1
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 6.3e-30 134.4 125 61.6
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 8.3e-30 134.0 84 82.1
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 2.4e-29 132.5 88 73.9
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.3e-29 131.3 76 84.2
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 7.0e-29 131.0 89 74.2
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 2.0e-28 129.4 57 100.0
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 4.5e-28 128.3 122 58.2
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.0e-27 127.1 92 75.0
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.4e-26 120.6 71 83.1
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-25 119.8 72 83.3
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.6e-25 119.8 79 77.2
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 3.6e-25 118.6 65 90.8
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 4.7e-25 118.2 53 98.1
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 4.7e-25 118.2 72 83.3
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 6.1e-25 117.9 72 81.9
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 1.8e-24 116.3 65 89.2
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 2.3e-24 115.9 66 89.4
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 4.0e-24 115.2 57 98.2
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 4.0e-24 115.2 57 98.2
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 4.0e-24 115.2 57 98.2
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 5.2e-24 114.8 66 80.3
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 8.8e-24 114.0 73 79.5
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 1.5e-23 113.2 73 80.8
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 7.5e-23 110.9 123 52.8
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 3.1e-21 105.5 49 93.9
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 7.0e-21 104.4 64 79.7
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 2.0e-20 102.8 45 97.8
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-19 100.1 46 97.8
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 1.7e-19 99.8 43 97.7
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 2.9e-19 99.0 64 75.0
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 5.0e-19 98.2 92 59.8
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 1.9e-18 96.3 46 91.3
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 1.2e-17 93.6 45 97.8
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 2.8e-17 92.4 58 79.3
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 2.8e-17 92.4 42 95.2
Oeu054713.1 Olea europaea HOM05D000963 ORTHO05D004715 6.1e-17 91.3 47 93.6
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 3.0e-16 89.0 43 97.7
Lj4g0000207 Lotus japonicus HOM05D000963 ORTHO05D004715 1.2e-15 87.0 40 100.0
FAN06G2610 Fragaria x ananassa HOM05D000963 ORTHO05D004715 2.0e-15 86.3 45 91.1
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 3.4e-15 85.5 49 87.8
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 5.7e-15 84.7 61 68.9
arahy.Tifrunner.gnm1.ann1.HN8ZWX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-14 83.2 40 95.0
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 2.2e-14 82.8 42 95.2
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 2.4e-13 79.3 84 54.8
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 1.2e-12 77.0 54 74.1
Gorai.002G200300 Gossypium raimondii HOM05D000963 ORTHO05D004715 5.9e-12 74.7 35 91.4
Sc21g0003630 Simmondsia chinensis HOM05D000556 ORTHO05D000404 8.0e-09 64.3 46 71.7
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 1.2e-07 60.5 40 75.0
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 1.2e-07 60.5 40 75.0


User provided reference genes

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