Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011969 Sechium edule HOM05D006480 ORTHO05D008072 1.4e-69 266.2 130 100.0
CsaV3_3G048380 Cucumis sativus L. HOM05D006480 ORTHO05D008072 2.4e-66 255.4 130 93.1
Potri.002G112700 Populus trichocarpa HOM05D006480 ORTHO05D008072 2.1e-62 242.3 128 88.3
Hma1.2p1_1068F.1_g253990 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 2.7e-62 241.9 130 90.0
CiPaw.15G154000 Carya illinoinensis HOM05D006480 ORTHO05D008072 1.0e-61 240.0 130 88.5
Duzib116G0020 Durio zibethinus HOM05D006480 ORTHO05D008072 1.0e-61 240.0 130 86.9
Duzib116G0295 Durio zibethinus HOM05D006480 ORTHO05D008072 1.0e-61 240.0 130 86.9
Actinidia10245 Actinidia chinensis HOM05D006480 ORTHO05D008072 1.4e-61 239.6 130 88.5
Cpa.g.sc160.14 Carica papaya HOM05D006480 ORTHO05D008072 2.3e-61 238.8 130 86.2
Ciclev10002836m.g Citrus clementina HOM05D006480 ORTHO05D008072 5.2e-61 237.7 130 86.9
ClCG11G014970 Citrullus lanatus HOM05D006480 ORTHO05D008072 2.0e-60 235.7 166 74.1
Glyma.04G087700 Glycine max HOM05D006480 ORTHO05D008072 2.0e-60 235.7 130 84.6
Cc10_g07920 Coffea canephora HOM05D006480 ORTHO05D008072 2.6e-60 235.3 130 86.2
Dinv01222 Davidia involucrata HOM05D006480 ORTHO05D008072 2.6e-60 235.3 127 88.2
Manes.18G039100 Manihot esculenta HOM05D006480 ORTHO05D008072 2.6e-60 235.3 130 84.6
MSTRG.25010 Avicennia marina HOM05D006480 ORTHO05D008072 4.4e-60 234.6 130 85.4
Thecc.08G081100 Theobroma cacao HOM05D006480 ORTHO05D008072 4.4e-60 234.6 130 84.6
Eucgr.F02200 Eucalyptus grandis HOM05D006480 ORTHO05D008072 7.5e-60 233.8 130 86.2
Glyma.06G089400 Glycine max HOM05D006480 ORTHO05D008072 7.5e-60 233.8 130 83.1
SGA_v2.0_scaffold152G36869 Striga asiatica HOM05D006480 ORTHO05D008072 9.8e-60 233.4 127 86.6
Duzib093G0124 Durio zibethinus HOM05D006480 ORTHO05D008072 1.3e-59 233.0 130 83.1
Manes.05G185600 Manihot esculenta HOM05D006480 ORTHO05D008072 1.7e-59 232.6 130 82.3
GSVIVG01009268001 Vitis vinifera HOM05D006480 ORTHO05D008072 1.7e-59 232.6 132 86.4
TWI56G0589 Tripterygium wilfordii HOM05D006480 ORTHO05D008072 2.2e-59 232.3 130 82.3
Gohir.D06G025000 Gossypium hirsutum HOM05D006480 ORTHO05D008072 2.8e-59 231.9 128 83.6
Sc15g0005270 Simmondsia chinensis HOM05D006480 ORTHO05D008072 2.8e-59 231.9 130 84.6
Lalb_Chr11g0064651 Lupinus albus HOM05D006480 ORTHO05D008072 4.8e-59 231.1 130 82.3
Migut.N02813 Erythranthe guttata HOM05D006480 ORTHO05D008072 1.1e-58 229.9 130 83.1
Nn5g30706 Nelumbo nucifera HOM05D006480 ORTHO05D008072 1.8e-58 229.2 122 89.3
Phvul.009G113300 Phaseolus vulgaris HOM05D006480 ORTHO05D008072 1.8e-58 229.2 130 81.5
PGR031G1285 Punica granatum HOM05D006480 ORTHO05D008072 2.4e-58 228.8 130 82.3
Gohir.A05G213700 Gossypium hirsutum HOM05D006480 ORTHO05D008072 4.1e-58 228.0 130 82.3
Medtr3g110600 Medicago truncatula HOM05D006480 ORTHO05D008072 9.1e-58 226.9 129 81.4
Psat0s2525g0120 Pisum sativum HOM05D006480 ORTHO05D008072 1.6e-57 226.1 129 80.6
FvH4_2g03000 Fragaria vesca HOM05D006480 ORTHO05D008072 2.7e-57 225.3 122 87.7
FAN15G0464 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.7e-57 225.3 122 87.7
Rhsim07G0215700 Rhododendron simsii HOM05D006480 ORTHO05D008072 2.7e-57 225.3 140 80.0
Ah.05g166870 Amaranthus hybridus HOM05D006480 ORTHO05D008072 3.5e-57 224.9 123 85.4
Aqoxy6G01530 Aquilegia oxysepala HOM05D006480 ORTHO05D008072 3.5e-57 224.9 122 87.7
Lsat_1_v5_gn_5_111841 Lactuca sativa HOM05D006480 ORTHO05D008072 3.5e-57 224.9 122 84.4
MBI16_g24165_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 3.5e-57 224.9 121 87.6
Prupe.8G152200 Prunus persica HOM05D006480 ORTHO05D008072 4.5e-57 224.6 122 86.9
TPR.G12422 Trifolium pratense HOM05D006480 ORTHO05D008072 4.5e-57 224.6 129 80.6
Dinv16062 Davidia involucrata HOM05D006480 ORTHO05D008072 7.7e-57 223.8 122 87.7
Psat5g019760 Pisum sativum HOM05D006480 ORTHO05D008072 1.0e-56 223.4 129 80.6
THA.LOC104816778 Tarenaya hassleriana HOM05D006480 ORTHO05D008072 1.0e-56 223.4 130 83.1
SalBow7G2271 Salvia bowleyana HOM05D006480 ORTHO05D008072 1.3e-56 223.0 130 82.3
arahy.Tifrunner.gnm1.ann1.2A26X2 Arachis hypogaea HOM05D006480 ORTHO05D008072 1.7e-56 222.6 130 79.2
Gohir.D05G217100 Gossypium hirsutum HOM05D006480 ORTHO05D008072 1.7e-56 222.6 127 81.9
RcHm_v2.0_Chr6g0247791 Rosa chinensis HOM05D006480 ORTHO05D008072 2.9e-56 221.9 122 86.1
MBI16_g31814_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 3.8e-56 221.5 121 86.8
Os12g0633200 Oryza sativa ssp. japonica HOM05D006480 ORTHO05D008072 3.8e-56 221.5 121 84.3
HPP92_019513 Vanilla planifolia HOM05D006480 ORTHO05D008072 5.0e-56 221.1 130 81.5
Ca_30083_v3 Cicer arietinum L. HOM05D006480 ORTHO05D008072 6.6e-56 220.7 129 79.1
FAN20G1015 Fragaria x ananassa HOM05D006480 ORTHO05D008072 6.6e-56 220.7 122 86.1
Zm00001eb032930 Zea mays HOM05D006480 ORTHO05D008072 8.6e-56 220.3 118 87.3
Zm00001eb282130 Zea mays HOM05D006480 ORTHO05D008072 8.6e-56 220.3 122 84.4
Lj1g0003564 Lotus japonicus HOM05D006480 ORTHO05D008072 2.5e-55 218.8 129 78.3
MD05G1108500 Malus domestica HOM05D006480 ORTHO05D008072 3.3e-55 218.4 122 83.6
Peaxi162Scf00628g00517 Petunia axillaris HOM05D006480 ORTHO05D008072 3.3e-55 218.4 127 80.3
Nitab4.5_0001614g0080 Nicotiana tabacum HOM05D006480 ORTHO05D008072 4.2e-55 218.0 127 81.1
CAN.G416.48 Capsicum annuum HOM05D006480 ORTHO05D008072 5.5e-55 217.6 127 81.1
Solyc04g077150.3 Solanum lycopersicum HOM05D006480 ORTHO05D008072 5.5e-55 217.6 127 80.3
Sopen04g030760 Solanum pennellii HOM05D006480 ORTHO05D008072 5.5e-55 217.6 127 80.3
PGSC0003DMG400004956 Solanum tuberosum HOM05D006480 ORTHO05D008072 9.5e-55 216.9 127 79.5
Hma1.2p1_2654F.1_g326220 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 1.2e-54 216.5 122 84.4
AL1G20730 Arabidopsis lyrata HOM05D006480 ORTHO05D008072 2.8e-54 215.3 127 79.5
AT1G10030 Arabidopsis thaliana HOM05D006480 ORTHO05D008072 3.6e-54 214.9 130 78.5
CANSAT25G0792 Cannabis sativa HOM05D006480 ORTHO05D008072 3.6e-54 214.9 122 82.8
ECA234G4602 Erigeron canadensis HOM05D006480 ORTHO05D008072 3.6e-54 214.9 122 82.0
HanXRQChr10g0293651 Helianthus annuus HOM05D006480 ORTHO05D008072 8.0e-54 213.8 122 81.1
Thhalv10009099m.g Eutrema salsugineum HOM05D006480 ORTHO05D008072 1.0e-53 213.4 130 77.7
BcaC05g24816 Brassica carinata HOM05D006480 ORTHO05D008072 1.4e-53 213.0 130 76.9
A06p06730 Brassica napus HOM05D006480 ORTHO05D008072 1.4e-53 213.0 130 76.9
Carub.0001s0945 Capsella rubella HOM05D006480 ORTHO05D008072 1.4e-53 213.0 130 77.7
CARHR010140 Cardamine hirsuta HOM05D006480 ORTHO05D008072 4.0e-53 211.5 130 76.2
BcaC05g24814 Brassica carinata HOM05D006480 ORTHO05D008072 5.2e-53 211.1 130 76.2
C05p08210 Brassica napus HOM05D006480 ORTHO05D008072 5.2e-53 211.1 130 76.2
MELO3C003481.2 Cucumis melo HOM05D006480 ORTHO05D008072 8.9e-53 210.3 108 94.4
Gorai.009G223900 Gossypium raimondii HOM05D006480 ORTHO05D008072 1.2e-52 209.9 119 82.4
BcaC07g38564 Brassica carinata HOM05D006480 ORTHO05D008072 1.5e-52 209.5 127 77.2
EL10Ac1g02330 Beta vulgaris HOM05D006480 ORTHO05D008072 2.0e-52 209.1 123 79.7
PSO675G8575 Papaver somniferum HOM05D006480 ORTHO05D008072 3.4e-52 208.4 122 77.9
PSO541G2150 Papaver somniferum HOM05D006480 ORTHO05D008072 5.7e-52 207.6 122 77.9
Sp1g08680 Schrenkiella parvula HOM05D006480 ORTHO05D008072 7.5e-52 207.2 130 75.4
BolC5t29573H Brassica oleracea HOM05D006480 ORTHO05D008072 2.2e-51 205.7 133 74.4
A08p34230 Brassica napus HOM05D006480 ORTHO05D008072 3.7e-51 204.9 120 80.0
BraA08t35335Z Brassica rapa HOM05D006480 ORTHO05D008072 3.7e-51 204.9 120 80.0
Oeu000749.3 Olea europaea HOM05D006480 ORTHO05D008072 4.9e-51 204.5 111 87.4
BolC8t48966H Brassica oleracea HOM05D006480 ORTHO05D008072 1.4e-50 203.0 129 76.0
MD10G1112500 Malus domestica HOM05D006480 ORTHO05D008072 1.2e-49 199.9 125 76.0
vmacro21395 Vaccinium macrocarpon HOM05D006480 ORTHO05D008072 2.7e-49 198.7 108 88.0
FAN24G1468 Fragaria x ananassa HOM05D006480 ORTHO05D008072 3.5e-49 198.4 132 75.0
QL12p040680 Quercus lobata HOM05D006480 ORTHO05D008072 3.5e-49 198.4 107 89.7
Sabra02G0089000 Salix brachista HOM05D006480 ORTHO05D008072 4.5e-49 198.0 112 84.8
FAN27G3220 Fragaria x ananassa HOM05D006480 ORTHO05D008072 5.0e-48 194.5 108 86.1
C08p13360 Brassica napus HOM05D006480 ORTHO05D008072 6.6e-48 194.1 128 73.4
BraA06t23887Z Brassica rapa HOM05D006480 ORTHO05D008072 8.6e-48 193.7 165 60.0
Gorai.010G029400 Gossypium raimondii HOM05D006480 ORTHO05D008072 8.6e-48 193.7 116 80.2
Hund05252 Selenicereus undatus HOM05D006480 ORTHO05D008072 1.5e-47 193.0 111 82.9
Atru.chr13.908 Acer truncatum HOM05D006480 ORTHO05D008072 2.5e-47 192.2 108 85.2
Gohir.A06G027600 Gossypium hirsutum HOM05D006480 ORTHO05D008072 5.6e-47 191.0 107 83.2
VMungo1309G2678 Vigna mungo HOM05D006480 ORTHO05D008072 1.6e-46 189.5 107 84.1
arahy.Tifrunner.gnm1.ann1.27XHB7 Arachis hypogaea HOM05D006480 ORTHO05D008072 8.0e-46 187.2 119 74.8
Aa31LG1G4870 Aethionema arabicum HOM05D006480 ORTHO05D008072 5.8e-44 181.0 107 81.3
Lj5A222T80 Lonicera japonica HOM05D006480 ORTHO05D008072 5.8e-44 181.0 109 82.6
Mapoly0019s0092 Marchantia polymorpha HOM05D006480 ORTHO05D008072 1.1e-42 176.8 118 66.9
Dinv09524 Davidia involucrata HOM05D006480 ORTHO05D008072 3.5e-41 171.8 99 84.8
Thecc.02G032200 Theobroma cacao HOM05D006480 ORTHO05D008072 4.6e-41 171.4 121 67.8
SMO112G0018 Selaginella moellendorffii HOM05D006480 ORTHO05D008072 1.0e-40 170.2 112 72.3
Nitab4.5_0002415g0030 Nicotiana tabacum HOM05D006480 ORTHO05D008072 4.0e-37 158.3 92 81.5
CARHR010030 Cardamine hirsuta HOM05D006480 ORTHO05D008072 2.4e-34 149.1 92 72.8
AagrBONN_evm.TU.Sc2ySwM_228.4946 Anthoceros agrestis HOM05D006480 ORTHO05D008072 1.2e-33 146.7 116 58.6
Zm00001eb129300 Zea mays HOM05D006480 ORTHO05D008072 2.1e-30 136.0 120 54.2
Zm00001eb116080 Zea mays HOM05D006480 ORTHO05D008072 1.4e-29 133.3 120 54.2
Zm00001eb116100 Zea mays HOM05D006480 ORTHO05D008072 1.4e-29 133.3 120 54.2
Zm00001eb129140 Zea mays HOM05D006480 ORTHO05D008072 3.1e-29 132.1 120 54.2
Zm00001eb409710 Zea mays HOM05D006480 ORTHO05D008072 3.4e-28 128.6 120 50.8
Zm00001eb129210 Zea mays HOM05D006480 ORTHO05D008072 7.8e-25 117.5 108 53.7
CBR_g29820 Chara braunii HOM05D006480 ORTHO05D008072 1.0e-24 117.1 119 44.5
CBR_g8921 Chara braunii HOM05D001598 ORTHO05D002757 1.7e-24 116.3 119 45.4
Pp3c19_15780 Physcomitrium patens HOM05D006480 ORTHO05D008072 3.0e-24 115.5 87 58.6
Duzib041G0452 Durio zibethinus HOM05D006480 ORTHO05D008072 1.6e-22 109.8 75 66.7


User provided reference genes

Program Settings