Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 2.9e-168 595.1 292 100.0
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 1.0e-128 463.8 263 83.7
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 2.0e-121 439.5 239 88.7
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 1.7e-99 366.7 260 64.2
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 1.1e-98 364.0 259 63.7
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 5.0e-96 355.1 261 62.8
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 5.0e-96 355.1 261 61.3
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 8.5e-96 354.4 258 61.6
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 5.5e-95 351.7 260 62.3
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 7.2e-95 351.3 261 62.1
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 9.4e-95 350.9 259 62.5
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 2.7e-94 349.4 261 59.4
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 3.6e-94 349.0 262 59.5
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 8.0e-94 347.8 261 60.5
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 3.0e-93 345.9 261 60.5
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 4.0e-93 345.5 258 60.9
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 8.8e-93 344.4 258 60.9
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 8.8e-93 344.4 261 60.2
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 5.7e-92 341.7 258 60.5
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 5.7e-92 341.7 263 60.8
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 7.5e-92 341.3 257 59.5
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 7.5e-92 341.3 260 59.6
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 1.7e-91 340.1 261 58.6
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 2.2e-91 339.7 270 57.8
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 2.2e-91 339.7 259 62.2
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 2.8e-91 339.3 258 61.2
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 8.3e-91 337.8 261 59.8
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 2.4e-90 336.3 261 59.4
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 2.4e-90 336.3 261 59.0
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 3.1e-90 335.9 279 57.3
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 3.1e-90 335.9 258 58.1
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 4.1e-90 335.5 261 59.8
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 4.1e-90 335.5 261 58.6
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 4.1e-90 335.5 261 58.6
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 4.1e-90 335.5 261 59.4
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 7.0e-90 334.7 260 58.1
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 9.1e-90 334.3 261 59.8
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 9.1e-90 334.3 260 59.6
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 1.6e-89 333.6 261 58.6
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 1.6e-89 333.6 260 58.8
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 2.0e-89 333.2 261 58.2
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 2.7e-89 332.8 261 58.6
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 3.5e-89 332.4 261 57.9
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 4.5e-89 332.0 261 57.9
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 7.7e-89 331.3 261 57.9
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 8.5e-88 327.8 260 55.4
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 1.5e-87 327.0 260 57.3
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 1.2e-86 323.9 260 54.6
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 2.1e-86 323.2 262 56.1
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 6.1e-86 321.6 261 57.9
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 6.1e-86 321.6 261 58.2
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 1.0e-85 320.9 265 56.2
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.8e-85 320.1 261 57.9
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 5.2e-85 318.5 261 56.3
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 5.2e-85 318.5 261 55.2
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 1.2e-84 317.4 261 54.8
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 2.6e-84 316.2 262 55.3
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.4e-84 315.8 261 57.1
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 9.8e-84 314.3 260 55.0
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 1.7e-83 313.5 263 54.4
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 3.7e-83 312.4 265 55.1
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 1.4e-82 310.5 263 54.8
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 4.1e-82 308.9 260 55.0
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 9.2e-82 307.8 256 54.3
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 3.5e-81 305.8 293 49.5
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 4.5e-81 305.4 262 52.7
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 4.5e-81 305.4 239 59.4
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 9.5e-79 297.7 275 49.1
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 3.6e-78 295.8 237 56.5
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 6.1e-78 295.0 237 54.4
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 2.3e-77 293.1 235 55.3
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 3.4e-76 289.3 249 55.4
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 2.2e-75 286.6 255 52.5
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 3.7e-75 285.8 260 46.9
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 1.1e-74 284.3 219 58.4
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 4.1e-74 282.3 218 59.6
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.2e-73 280.8 353 42.8
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 4.6e-73 278.9 235 53.2
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 3.9e-72 275.8 252 54.0
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 1.9e-71 273.5 397 38.3
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 6.2e-70 268.5 300 47.7
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 2.0e-68 263.5 260 46.9
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 1.3e-67 260.8 258 45.3
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 2.2e-67 260.0 237 49.8
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.2e-65 254.2 219 55.7
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 5.0e-64 248.8 222 54.1
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 3.6e-62 242.7 210 51.4
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 1.5e-60 237.3 183 61.2
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 2.6e-60 236.5 229 57.2
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 9.2e-58 228.0 242 47.5
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 7.8e-57 224.9 263 40.3
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 7.8e-57 224.9 182 58.8
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 6.4e-51 205.3 281 37.0
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 8.4e-51 204.9 165 57.6
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 5.4e-50 202.2 195 51.8
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 7.1e-50 201.8 195 51.8
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 6.0e-49 198.7 294 40.1
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 3.0e-48 196.4 144 61.1
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 8.6e-48 194.9 174 52.3
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 3.2e-42 176.4 250 36.8
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 5.4e-42 175.6 145 53.8
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 8.7e-40 168.3 221 43.0
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 4.3e-39 166.0 207 43.5
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 1.3e-35 154.5 122 55.7
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 4.9e-35 152.5 104 62.5
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 2.2e-27 127.1 96 54.2
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 9.3e-26 121.7 84 60.7
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 1.8e-24 117.5 261 28.0
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.1e-23 114.8 93 54.8
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 3.3e-23 113.2 128 48.4
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 2.8e-22 110.2 254 30.3
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 6.9e-21 105.5 76 56.6
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 1.5e-20 104.4 76 55.3
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 1.7e-19 100.9 279 28.0
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 1.8e-16 90.9 298 25.5
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 5.5e-10 69.3 68 42.6
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 1.3e-06 58.2 44 54.5
Hund19874 Selenicereus undatus HOM05D006689 ORTHO05D008349 8.2e-06 55.5 59 42.4


User provided reference genes

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