Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 4.4e-138 494.6 246 100.0
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 2.2e-113 412.5 269 78.8
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 6.5e-113 411.0 269 80.3
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 7.4e-109 397.5 298 72.1
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 7.2e-96 354.4 275 70.2
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 2.1e-95 352.8 261 72.0
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.3e-94 349.4 265 69.8
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 5.1e-94 348.2 269 68.8
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 8.8e-94 347.4 272 69.9
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 1.5e-93 346.7 270 68.9
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 1.5e-93 346.7 265 67.9
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 2.6e-93 345.9 269 70.6
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 2.6e-93 345.9 271 67.5
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.3e-93 345.5 271 67.5
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 7.4e-93 344.4 263 68.4
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 7.4e-93 344.4 264 68.9
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 1.3e-92 343.6 271 67.2
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 1.3e-92 343.6 266 69.5
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 1.3e-92 343.6 276 68.5
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 1.7e-92 343.2 267 68.9
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 1.7e-92 343.2 267 69.3
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 2.2e-92 342.8 276 68.1
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 3.7e-92 342.0 262 69.1
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 4.8e-92 341.7 264 68.2
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 8.2e-92 340.9 276 67.8
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 1.1e-91 340.5 273 66.3
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 1.1e-91 340.5 274 65.7
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.1e-91 340.5 264 66.3
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.8e-91 339.7 276 65.2
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 2.4e-91 339.3 272 69.1
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 2.4e-91 339.3 261 66.7
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 4.1e-91 338.6 271 66.4
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 7.0e-91 337.8 185 87.0
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 9.1e-91 337.4 253 70.8
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.2e-90 337.0 273 69.6
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 4.5e-90 335.1 266 67.3
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 5.9e-90 334.7 187 85.0
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 5.9e-90 334.7 276 67.4
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-89 334.0 185 83.8
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-89 334.0 185 83.8
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-89 334.0 185 83.8
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.0e-89 334.0 267 67.0
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.3e-89 333.6 274 65.7
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 1.7e-89 333.2 268 67.2
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 2.2e-89 332.8 266 66.9
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 3.8e-89 332.0 270 66.7
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 5.0e-89 331.6 244 70.9
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 8.5e-89 330.9 273 66.3
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 1.1e-88 330.5 186 86.0
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.5e-88 330.1 275 65.5
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.9e-88 329.7 273 64.5
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 1.9e-88 329.7 239 69.0
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 9.4e-88 327.4 239 68.6
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 9.4e-88 327.4 230 72.6
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 9.4e-88 327.4 269 65.4
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 1.2e-87 327.0 276 64.1
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 1.6e-87 326.6 185 84.3
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 2.1e-87 326.2 274 63.5
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.1e-87 326.2 266 66.9
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 3.6e-87 325.5 272 64.7
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 4.7e-87 325.1 186 83.9
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 4.7e-87 325.1 280 64.3
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 6.1e-87 324.7 188 84.0
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.0e-86 323.9 263 64.3
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 1.8e-86 323.2 192 83.3
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.0e-85 319.7 276 63.8
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 2.0e-85 319.7 269 64.7
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 3.3e-85 318.9 260 66.5
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 7.5e-85 317.8 267 64.0
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 9.7e-85 317.4 269 66.2
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 9.7e-85 317.4 178 86.5
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 1.3e-84 317.0 286 61.9
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 2.2e-84 316.2 257 65.8
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 4.8e-84 315.1 271 62.7
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 6.3e-84 314.7 187 79.7
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 8.2e-84 314.3 243 68.7
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 2.4e-83 312.8 185 83.2
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 3.1e-83 312.4 188 79.8
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 3.1e-83 312.4 262 63.4
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 3.1e-83 312.4 262 63.4
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 3.1e-83 312.4 188 79.8
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 4.1e-83 312.0 262 61.8
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 4.1e-83 312.0 271 62.7
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 4.1e-83 312.0 275 62.2
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 2.0e-82 309.7 301 58.5
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 2.7e-82 309.3 262 63.4
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 4.5e-82 308.5 232 66.4
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 1.0e-81 307.4 274 60.6
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 1.3e-81 307.0 274 62.4
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 1.3e-81 307.0 261 63.6
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 2.9e-81 305.8 254 62.6
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 1.5e-80 303.5 251 64.1
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 4.2e-80 302.0 190 78.9
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 4.2e-80 302.0 261 63.2
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 3.6e-79 298.9 199 73.4
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 6.1e-79 298.1 263 62.0
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 8.0e-79 297.7 227 68.3
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 9.8e-77 290.8 185 76.2
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 4.5e-74 282.0 186 72.6
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 4.7e-71 271.9 262 59.2
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 1.5e-69 266.9 244 59.4
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 2.2e-68 263.1 155 80.6
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 1.4e-67 260.4 185 71.4
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 5.4e-67 258.5 239 60.7
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 7.0e-67 258.1 156 79.5
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 9.2e-67 257.7 185 69.7
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 2.9e-65 252.7 268 54.5
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 2.0e-58 229.9 196 58.7
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 3.3e-56 222.6 206 59.2
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 7.3e-56 221.5 183 63.9
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 9.5e-56 221.1 187 59.4
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 7.5e-53 211.5 127 78.7
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.3e-52 210.7 116 86.2
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 1.7e-52 210.3 207 56.0
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 1.2e-50 204.1 185 56.8
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.7e-50 203.0 179 58.1
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 3.3e-48 196.1 111 83.8
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 1.2e-31 141.0 171 52.0
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.8e-31 139.8 169 49.1
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 3.9e-25 119.4 191 41.4
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 8.7e-17 91.7 53 75.5
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.9e-08 63.9 34 82.4


User provided reference genes

Program Settings