Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 5.5e-104 380.9 188 100.0
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 1.5e-85 319.7 189 85.7
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 5.2e-78 294.7 188 73.9
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 5.2e-78 294.7 188 72.9
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 1.2e-77 293.5 189 73.0
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 2.0e-77 292.7 188 72.9
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.3e-77 292.0 188 70.7
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 9.7e-77 290.4 185 73.5
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 4.8e-76 288.1 189 72.5
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 8.2e-76 287.3 189 74.1
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 2.4e-75 285.8 189 71.4
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 7.0e-75 284.3 192 70.8
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 9.1e-75 283.9 188 69.1
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 9.1e-75 283.9 188 70.7
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 2.0e-74 282.7 187 73.3
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 3.5e-74 282.0 189 71.4
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 5.9e-74 281.2 188 70.2
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.3e-73 280.0 188 70.2
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.7e-73 279.6 189 69.3
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 2.2e-73 279.3 189 69.3
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 2.2e-73 279.3 151 91.4
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.2e-73 279.3 188 69.7
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 3.8e-73 278.5 189 70.4
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 5.0e-73 278.1 189 69.8
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 5.0e-73 278.1 189 70.4
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 1.1e-72 276.9 188 68.1
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 1.1e-72 276.9 189 70.4
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 1.5e-72 276.6 189 69.3
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 1.9e-72 276.2 189 69.8
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 3.2e-72 275.4 189 69.3
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 3.2e-72 275.4 189 69.3
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 5.5e-72 274.6 189 69.3
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 5.5e-72 274.6 187 67.4
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 7.2e-72 274.2 141 95.0
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 1.2e-71 273.5 188 67.6
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 3.6e-71 271.9 188 67.0
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 1.0e-70 270.4 194 69.1
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.8e-70 269.6 189 69.3
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 4.0e-70 268.5 187 71.7
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 6.8e-70 267.7 189 65.6
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 1.5e-69 266.5 184 67.4
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 1.5e-69 266.5 194 67.5
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 2.0e-69 266.2 195 66.7
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 2.6e-69 265.8 188 68.1
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 4.4e-69 265.0 188 68.1
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 5.7e-69 264.6 188 67.0
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 7.5e-69 264.2 250 54.8
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 2.8e-68 262.3 190 68.4
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 4.8e-68 261.5 188 66.5
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 6.3e-68 261.2 195 67.7
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 8.3e-68 260.8 195 67.2
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.1e-67 260.4 189 64.0
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 1.8e-67 259.6 195 65.1
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 7.0e-67 257.7 187 69.0
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 9.1e-67 257.3 190 66.3
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 1.6e-66 256.5 187 67.4
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.6e-66 256.5 187 67.4
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 3.5e-66 255.4 195 66.7
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 4.5e-66 255.0 187 66.8
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.9e-66 254.6 187 66.8
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.0e-65 253.8 189 65.1
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.0e-65 253.8 189 65.1
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.3e-65 253.4 185 64.3
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.7e-65 253.1 222 58.1
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.7e-65 253.1 191 63.4
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 1.7e-65 253.1 195 66.2
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.8e-65 251.9 191 62.3
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 8.6e-65 250.8 190 61.6
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 2.5e-64 249.2 189 61.4
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 2.5e-64 249.2 176 68.2
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 9.5e-64 247.3 190 65.3
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 9.5e-64 247.3 187 68.4
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.6e-63 246.5 188 63.3
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.6e-63 246.5 191 63.9
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 2.1e-63 246.1 191 61.3
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 2.8e-63 245.7 189 60.3
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 3.6e-63 245.4 189 64.0
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 3.6e-63 245.4 160 78.1
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 6.1e-63 244.6 191 61.8
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 3.0e-62 242.3 189 60.3
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 4.0e-62 241.9 189 59.8
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 1.2e-61 240.4 183 65.0
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.7e-60 236.5 189 58.7
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 2.8e-60 235.7 201 64.2
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.7e-60 235.3 159 71.7
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 6.3e-60 234.6 189 58.2
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 9.2e-59 230.7 185 57.8
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 9.2e-59 230.7 190 57.4
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 1.2e-58 230.3 185 58.4
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 3.5e-58 228.8 200 61.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 4.5e-58 228.4 189 58.7
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 2.5e-56 222.6 158 63.9
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 4.7e-55 218.4 155 66.5
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 9.8e-53 210.7 190 59.5
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 1.4e-51 206.8 152 65.8
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 1.4e-51 206.8 191 56.0
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 4.6e-50 201.8 160 59.4
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 5.9e-50 201.4 140 68.6
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 1.8e-46 189.9 146 64.4
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 8.3e-44 181.0 188 50.5
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 9.9e-37 157.5 133 52.6
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 9.9e-37 157.5 190 48.4
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 1.7e-36 156.8 180 47.2
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 5.4e-35 151.8 191 46.1
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 1.1e-32 144.1 86 70.9
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 7.3e-32 141.4 103 68.0
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 1.3e-28 130.6 95 65.3
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 3.8e-28 129.0 89 68.5
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 3.2e-27 125.9 159 39.6
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 3.5e-26 122.5 118 49.2
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.3e-24 115.9 96 55.2
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 6.9e-22 108.2 167 35.3
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.2e-21 107.5 86 61.6
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 5.8e-21 105.1 119 38.7
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 5.8e-21 105.1 75 64.0
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.5e-18 95.9 65 69.2
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 4.8e-15 85.5 104 47.1
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 2.4e-11 73.2 124 29.8
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 3.9e-09 65.9 48 68.8
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 8.7e-09 64.7 51 58.8
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 6.2e-07 58.5 47 63.8


User provided reference genes

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