Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 6.1e-70 267.3 130 100.0
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 7.8e-25 117.5 135 51.1
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 1.0e-24 117.1 129 54.3
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 2.4e-21 105.9 129 48.8
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.6e-17 93.2 83 56.6
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 1.1e-13 80.5 138 37.7
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 1.8e-13 79.7 137 38.0
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.4e-13 79.3 136 36.8
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 5.3e-13 78.2 136 35.3
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 5.3e-13 78.2 124 40.3
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 6.9e-13 77.8 136 36.8
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 9.0e-13 77.4 134 38.8
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 1.2e-12 77.0 140 37.9
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.2e-12 77.0 138 36.2
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 2.6e-12 75.9 130 38.5
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 4.4e-12 75.1 128 37.5
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 5.8e-12 74.7 137 36.5
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 7.6e-12 74.3 137 34.3
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 1.7e-11 73.2 130 38.5
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 1.7e-11 73.2 135 36.3
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 1.7e-11 73.2 135 36.3
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 2.2e-11 72.8 115 35.7
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 2.9e-11 72.4 136 35.3
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 3.8e-11 72.0 135 34.8
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 3.8e-11 72.0 138 34.8
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 6.4e-11 71.2 138 34.8
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 8.4e-11 70.9 79 39.2
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 8.4e-11 70.9 136 33.8
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 1.1e-10 70.5 138 36.2
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 1.4e-10 70.1 136 37.5
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 2.4e-10 69.3 131 35.9
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 2.4e-10 69.3 136 34.6
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 3.2e-10 68.9 143 32.2
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 5.4e-10 68.2 137 35.8
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 1.2e-09 67.0 120 34.2
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 1.6e-09 66.6 138 32.6
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 2.1e-09 66.2 133 32.3
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 2.7e-09 65.9 143 32.2
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 3.5e-09 65.5 77 39.0
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 7.8e-09 64.3 113 34.5
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 1.7e-08 63.2 134 32.8
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 2.3e-08 62.8 126 34.1
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 3.9e-08 62.0 116 35.3
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 3.9e-08 62.0 133 30.8
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 3.9e-08 62.0 134 35.1
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 5.1e-08 61.6 133 32.3
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 5.1e-08 61.6 133 32.3
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 5.1e-08 61.6 137 32.1
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 5.1e-08 61.6 128 33.6
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 6.6e-08 61.2 113 29.2
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 1.1e-07 60.5 132 36.4
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 1.5e-07 60.1 113 31.0
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 1.9e-07 59.7 138 29.7
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 1.9e-07 59.7 134 32.8
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 2.5e-07 59.3 56 51.8
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 2.5e-07 59.3 115 39.1
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 2.5e-07 59.3 82 40.2
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 4.3e-07 58.5 135 36.3
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 4.3e-07 58.5 95 36.8
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 4.3e-07 58.5 129 32.6
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 5.6e-07 58.2 144 32.6
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 5.6e-07 58.2 77 40.3
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 7.3e-07 57.8 138 29.0
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 7.3e-07 57.8 47 51.1
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 9.6e-07 57.4 86 37.2
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 1.3e-06 57.0 139 33.1
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 1.6e-06 56.6 81 35.8
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 2.1e-06 56.2 98 35.7
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 2.8e-06 55.8 116 32.8
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 2.8e-06 55.8 70 42.9
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 3.6e-06 55.5 135 34.8
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 4.8e-06 55.1 33 63.6
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 4.8e-06 55.1 88 36.4
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 4.8e-06 55.1 65 43.1


User provided reference genes

Program Settings