Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011580 Sechium edule HOM05D005051 ORTHO05D005945 5.4e-187 657.5 336 100.0
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 2.3e-108 396.4 402 60.9
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 1.0e-100 370.9 404 56.7
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 5.0e-100 368.6 408 54.9
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 4.3e-99 365.5 403 55.6
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 1.4e-94 350.5 402 54.2
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 9.2e-70 268.1 406 44.6
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 9.2e-70 268.1 409 44.3
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 1.2e-69 267.7 402 44.5
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 4.6e-69 265.8 406 44.6
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 1.7e-68 263.8 402 44.3
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 1.9e-67 260.4 412 42.0
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 1.9e-67 260.4 383 45.7
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 2.5e-67 260.0 410 44.1
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 1.6e-66 257.3 408 42.9
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 3.6e-66 256.1 409 42.1
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 4.8e-66 255.8 396 43.7
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 8.1e-66 255.0 409 41.8
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 1.1e-65 254.6 410 41.5
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 2.4e-65 253.4 404 43.1
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 2.4e-65 253.4 404 42.3
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 6.9e-65 251.9 415 42.2
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 9.0e-65 251.5 395 41.8
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 3.4e-64 249.6 389 42.7
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 9.9e-64 248.1 405 44.2
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 1.7e-63 247.3 400 41.5
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 1.7e-63 247.3 403 42.4
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 2.2e-63 246.9 404 42.8
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 2.2e-63 246.9 406 42.6
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 3.8e-63 246.1 404 42.3
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.1e-62 244.6 410 43.2
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 1.9e-62 243.8 410 43.7
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.9e-62 243.8 410 43.7
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 1.9e-62 243.8 402 41.0
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 2.4e-62 243.4 401 41.6
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 3.2e-62 243.0 393 42.0
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 4.2e-62 242.7 401 40.6
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 4.2e-62 242.7 405 39.3
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 7.1e-62 241.9 399 42.1
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 9.3e-62 241.5 401 40.1
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 1.2e-61 241.1 403 41.4
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 1.6e-61 240.7 393 42.2
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 1.6e-61 240.7 406 44.1
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 4.6e-61 239.2 411 42.8
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 4.6e-61 239.2 401 42.1
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 2.3e-60 236.9 414 39.9
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 5.1e-60 235.7 393 41.2
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 6.6e-60 235.3 402 42.5
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 8.7e-60 235.0 406 40.1
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 1.1e-59 234.6 398 42.5
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 2.5e-59 233.4 403 40.9
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 7.3e-59 231.9 383 42.3
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 9.6e-59 231.5 401 41.4
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 1.8e-57 227.3 406 39.9
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 2.4e-57 226.9 356 43.8
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 9.0e-57 224.9 402 39.1
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 1.2e-56 224.6 395 41.0
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 2.6e-56 223.4 429 39.4
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 4.5e-56 222.6 395 40.0
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 7.6e-56 221.9 400 41.2
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 1.3e-55 221.1 403 39.2
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 1.7e-55 220.7 399 40.4
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 2.2e-55 220.3 391 41.2
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 3.8e-55 219.5 389 40.9
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 4.9e-55 219.2 389 41.4
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 4.9e-55 219.2 388 39.4
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 8.4e-55 218.4 412 38.3
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 8.4e-55 218.4 388 41.8
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 2.4e-54 216.9 414 40.8
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 4.2e-54 216.1 389 39.8
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 4.2e-54 216.1 387 40.6
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 5.4e-54 215.7 395 40.3
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 2.1e-53 213.8 396 40.4
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 2.1e-53 213.8 400 39.5
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 6.0e-53 212.2 399 40.4
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 1.8e-52 210.7 389 39.6
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 3.0e-52 209.9 390 39.7
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 4.3e-51 206.1 420 37.9
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 5.6e-51 205.7 398 39.4
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 1.3e-50 204.5 392 39.0
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 2.8e-50 203.4 366 40.2
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 4.8e-50 202.6 389 38.3
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 4.8e-50 202.6 401 38.4
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 1.1e-49 201.4 391 39.1
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 1.4e-49 201.1 395 37.5
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 1.4e-49 201.1 387 39.0
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 1.8e-49 200.7 390 39.7
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 1.8e-49 200.7 393 38.9
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 1.5e-48 197.6 400 37.0
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 1.5e-48 197.6 400 38.2
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 3.4e-48 196.4 385 38.2
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 5.8e-48 195.7 403 37.7
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 5.8e-48 195.7 402 37.1
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 7.6e-48 195.3 394 38.3
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 7.6e-48 195.3 400 37.2
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 1.3e-47 194.5 391 38.6
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 4.9e-47 192.6 386 38.1
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 4.9e-47 192.6 339 38.6
TWI18G1080 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 4.9e-47 192.6 354 41.2
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 1.1e-46 191.4 386 38.1
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 4.2e-46 189.5 400 37.2
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 3.5e-45 186.4 394 35.5
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 2.0e-40 170.6 402 35.8
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 4.5e-40 169.5 385 34.8
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 4.5e-40 169.5 379 33.5
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 9.7e-35 151.8 393 31.8
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 2.8e-34 150.2 346 36.4
QL09p053462 Quercus lobata HOM05D005051 ORTHO05D005945 2.9e-31 140.2 247 39.7
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 2.7e-29 133.7 256 37.5
Os11g0479232 Oryza sativa ssp. japonica HOM05D005051 ORTHO05D005945 3.3e-27 126.7 245 36.7
Glyma.13G182400 Glycine max HOM05D005051 ORTHO05D005945 1.2e-24 118.2 212 40.1
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.5e-22 110.5 361 29.9
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 3.2e-22 110.2 318 28.3
Nitab4.5_0000345g0090 Nicotiana tabacum HOM05D005051 ORTHO05D000055 4.2e-22 109.8 127 53.5
QL09p048654 Quercus lobata HOM05D005051 ORTHO05D005945 2.7e-21 107.1 225 36.4
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 3.6e-21 106.7 383 27.4
Glyma.13G059866 Glycine max HOM05D005051 ORTHO05D005945 1.4e-20 104.8 120 50.8
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 9.7e-19 98.6 246 32.1
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 1.4e-17 94.7 113 45.1
HPP92_008216 Vanilla planifolia HOM05D005051 ORTHO05D005945 5.3e-17 92.8 127 45.7
Glyma.13G196100 Glycine max HOM05D005051 ORTHO05D005945 1.5e-16 91.3 229 33.2
Pp3c21_19350 Physcomitrium patens HOM05D005051 ORTHO05D005945 2.6e-16 90.5 412 27.9
unitig_899.g15018 Utricularia gibba HOM05D003904 ORTHO05D004378 4.2e-14 83.2 81 56.8
TPR.G17133 Trifolium pratense HOM05D005051 ORTHO05D005945 3.6e-13 80.1 134 40.3
QL09p053457 Quercus lobata HOM05D005051 ORTHO05D005945 8.8e-12 75.5 115 42.6
Actinidia31469 Actinidia chinensis HOM05D005051 ORTHO05D005945 1.8e-09 67.8 151 35.8
SMO259G0028 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.4e-09 67.4 276 25.0
Glyma.13G258901 Glycine max HOM05D005051 ORTHO05D005945 7.0e-09 65.9 56 62.5
Glyma.13G368066 Glycine max HOM05D005051 ORTHO05D005945 7.0e-09 65.9 56 62.5
Glyma.13G258850 Glycine max HOM05D005051 ORTHO05D005945 5.0e-07 59.7 175 33.7
CBR_g44939 Chara braunii HOM05D005051 ORTHO05D005945 7.2e-06 55.8 140 32.1


User provided reference genes

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