Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011532 Sechium edule HOM05D007549 ORTHO05D009532 1.5e-32 142.1 67 100.0
Sed0017373 Sechium edule HOM05D007549 ORTHO05D009532 1.5e-32 142.1 67 100.0
Sed0021629 Sechium edule HOM05D007549 ORTHO05D009532 1.5e-32 142.1 67 100.0
Sed0025178 Sechium edule HOM05D007549 ORTHO05D009532 1.5e-32 142.1 67 100.0
MELO3C001514.2 Cucumis melo HOM05D007549 ORTHO05D009532 1.3e-31 139.0 67 97.0
CsaV3_7G024610 Cucumis sativus L. HOM05D007549 ORTHO05D009532 2.9e-31 137.9 67 95.5
Gohir.D02G088100 Gossypium hirsutum HOM05D007549 ORTHO05D009532 7.1e-30 133.3 67 92.5
RcHm_v2.0_CPg0502021 Rosa chinensis HOM05D007549 ORTHO05D009532 2.7e-29 131.3 67 94.0
Gohir.1Z050480 Gossypium hirsutum HOM05D007549 ORTHO05D009532 3.5e-29 131.0 67 91.0
Gohir.A09G103600 Gossypium hirsutum HOM05D007549 ORTHO05D009532 3.5e-29 131.0 67 91.0
Nn021s41532 Nelumbo nucifera HOM05D007549 ORTHO05D009532 3.5e-29 131.0 67 92.5
A06p23130 Brassica napus HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
BNapus_Darmor_BZH_scaffold_253p00240 Brassica napus HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
BNapus_Darmor_BZH_scaffold_287p00180 Brassica napus HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
C02p43570 Brassica napus HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
C06p22970 Brassica napus HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
C06p23020 Brassica napus HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
BolC8t52432H Brassica oleracea HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
BolSC29t60475H Brassica oleracea HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
BolSC29t60596H Brassica oleracea HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
BolSC35t60656H Brassica oleracea HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
BolSC35t60741H Brassica oleracea HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
BolSC47t61088H Brassica oleracea HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
BraA06t25416Z Brassica rapa HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
BraSC25t45857Z Brassica rapa HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
CARHR282150 Cardamine hirsuta HOM05D007549 ORTHO05D009532 1.3e-28 129.0 67 89.6
Ciclev10033989m.g Citrus clementina HOM05D007549 ORTHO05D009532 1.7e-28 128.6 67 89.6
ClCG11G009530 Citrullus lanatus HOM05D007549 ORTHO05D009532 2.3e-28 128.3 62 95.2
ATCG00640 Arabidopsis thaliana HOM05D007549 ORTHO05D009532 3.0e-28 127.9 67 88.1
Gohir.D12G108000 Gossypium hirsutum HOM05D007549 ORTHO05D009532 3.0e-28 127.9 67 89.6
DCAR_032505 Daucus carota HOM05D007549 ORTHO05D009532 3.9e-28 127.5 67 88.1
BolC9t53163H Brassica oleracea HOM05D007549 ORTHO05D009532 5.1e-28 127.1 67 89.6
AL2G21610 Arabidopsis lyrata HOM05D007549 ORTHO05D009532 6.6e-28 126.7 67 88.1
BolSC49t61174H Brassica oleracea HOM05D007549 ORTHO05D009532 6.6e-28 126.7 67 88.1
HanXRQChr00c0314g0573541 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 86.6
HanXRQChr01g0020311 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 86.6
HanXRQChr02g0041601 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 86.6
HanXRQChr02g0044861 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 86.6
HanXRQChr10g0284281 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 86.6
HanXRQChr10g0289301 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 86.6
HanXRQChr10g0318161 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 86.6
HanXRQChr11g0326871 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 86.6
HanXRQChr11g0345191 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 86.6
HanXRQCPg0580081 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 86.6
EL10As12g24029 Beta vulgaris HOM05D007549 ORTHO05D009532 1.5e-27 125.6 67 88.1
EL10As15g24130 Beta vulgaris HOM05D007549 ORTHO05D009532 1.5e-27 125.6 67 88.1
BolC2t08912H Brassica oleracea HOM05D007549 ORTHO05D009532 1.9e-27 125.2 67 88.1
BolC6t36197H Brassica oleracea HOM05D007549 ORTHO05D009532 1.9e-27 125.2 67 86.6
Gohir.A10G214800 Gossypium hirsutum HOM05D007549 ORTHO05D009532 2.5e-27 124.8 67 86.6
HanXRQChr04g0095131 Helianthus annuus HOM05D007549 ORTHO05D009532 3.3e-27 124.4 67 85.1
PGR111G0018 Punica granatum HOM05D007549 ORTHO05D009532 3.3e-27 124.4 69 88.4
BraSC138t45567Z Brassica rapa HOM05D007549 ORTHO05D009532 4.3e-27 124.0 65 87.7
Solyc09g064410.1 Solanum lycopersicum HOM05D007549 ORTHO05D009532 4.3e-27 124.0 67 86.6
CAN.G1148.11 Capsicum annuum HOM05D007549 ORTHO05D009532 7.3e-27 123.2 67 86.6
CAN.G1314.5 Capsicum annuum HOM05D007549 ORTHO05D009532 7.3e-27 123.2 67 86.6
CAN.G2018.15 Capsicum annuum HOM05D007549 ORTHO05D009532 7.3e-27 123.2 67 86.6
CAN.G2018.7 Capsicum annuum HOM05D007549 ORTHO05D009532 7.3e-27 123.2 67 86.6
CAN.G438.85 Capsicum annuum HOM05D007549 ORTHO05D009532 7.3e-27 123.2 67 86.6
HanXRQChr02g0052591 Helianthus annuus HOM05D007549 ORTHO05D009532 7.3e-27 123.2 67 85.1
PSO548G0033 Papaver somniferum HOM05D007549 ORTHO05D009532 7.3e-27 123.2 67 86.6
Potri.003G067400 Populus trichocarpa HOM05D007549 ORTHO05D009532 1.3e-26 122.5 67 85.1
Gohir.A06G124600 Gossypium hirsutum HOM05D007549 ORTHO05D009532 2.1e-26 121.7 67 85.1
CAN.G3365.3 Capsicum annuum HOM05D007549 ORTHO05D009532 2.8e-26 121.3 67 83.6
BraSC58t46491Z Brassica rapa HOM05D007549 ORTHO05D009532 1.1e-25 119.4 62 88.7
CAN.G452.5 Capsicum annuum HOM05D007549 ORTHO05D009532 1.4e-25 119.0 67 85.1
HanXRQChr00c0339g0573821 Helianthus annuus HOM05D007549 ORTHO05D009532 2.4e-25 118.2 62 85.5
HanXRQChr10g0283591 Helianthus annuus HOM05D007549 ORTHO05D009532 2.4e-25 118.2 62 85.5
Lalb_Chr07g0192081 Lupinus albus HOM05D007549 ORTHO05D009532 1.2e-24 115.9 68 82.4
Lalb_Chr20g0115511 Lupinus albus HOM05D007549 ORTHO05D009532 1.2e-24 115.9 68 82.4
Glyma.12G232300 Glycine max HOM05D007549 ORTHO05D009532 1.5e-24 115.5 67 82.1
Oeu062831.1 Olea europaea HOM05D007549 ORTHO05D009532 2.0e-24 115.2 67 83.6
Glyma.15G239000 Glycine max HOM05D007549 ORTHO05D009532 5.8e-24 113.6 67 79.1
ClCG02G007770 Citrullus lanatus HOM05D007549 ORTHO05D009532 2.2e-23 111.7 67 83.6
Lj1g0000802 Lotus japonicus HOM05D007549 ORTHO05D009532 3.8e-23 110.9 67 79.1
LjContig00318g0016693 Lotus japonicus HOM05D007549 ORTHO05D009532 3.8e-23 110.9 67 79.1
Lj5g0014355 Lotus japonicus HOM05D007549 ORTHO05D009532 1.1e-22 109.4 67 77.6
Medtr4g051350 Medicago truncatula HOM05D004570 ORTHO05D009532 1.9e-22 108.6 61 80.3
Gohir.D11G296624 Gossypium hirsutum HOM05D007549 ORTHO05D009532 3.2e-22 107.8 67 77.6
Gorai.007G320000 Gossypium raimondii HOM05D007549 ORTHO05D009532 3.2e-22 107.8 67 77.6
Medtr8g045210 Medicago truncatula HOM05D007549 ORTHO05D009532 9.3e-22 106.3 62 77.4
Lalb_Chr23g0274441 Lupinus albus HOM05D007549 ORTHO05D009532 2.7e-21 104.8 67 76.1
HanXRQChr11g0331601 Helianthus annuus HOM05D007549 ORTHO05D009532 1.8e-20 102.1 66 71.2
BolC4t25867H Brassica oleracea HOM05D007549 ORTHO05D009532 1.9e-19 98.6 56 80.4
arahy.Tifrunner.gnm1.ann1.JD40MT Arachis hypogaea HOM05D007549 ORTHO05D009532 7.4e-19 96.7 59 76.3
HanXRQChr16g0529021 Helianthus annuus HOM05D007549 ORTHO05D009532 3.6e-18 94.4 51 86.3
Gohir.D07G173850 Gossypium hirsutum HOM05D007549 ORTHO05D009532 6.2e-18 93.6 67 67.2
Gorai.001G194300 Gossypium raimondii HOM05D007549 ORTHO05D009532 3.1e-17 91.3 67 65.7
HanXRQChr00c0557g0575791 Helianthus annuus HOM05D007549 ORTHO05D009532 3.1e-17 91.3 51 82.4
Gorai.010G129600 Gossypium raimondii HOM05D007549 ORTHO05D009532 1.5e-16 89.0 67 67.2
Gohir.D11G284350 Gossypium hirsutum HOM05D007549 ORTHO05D009532 8.4e-15 83.2 67 65.7
Gohir.D06G113650 Gossypium hirsutum HOM05D007549 ORTHO05D009532 1.4e-14 82.4 67 64.2
Lalb_Chr23g0274351 Lupinus albus HOM05D007549 ORTHO05D009532 7.1e-14 80.1 51 78.4
Hund31442 Selenicereus undatus HOM05D007549 ORTHO05D009532 9.3e-14 79.7 53 73.6
TPR.G34467 Trifolium pratense HOM05D007549 ORTHO05D009532 9.3e-14 79.7 49 73.5
Gohir.A07G175856 Gossypium hirsutum HOM05D007549 ORTHO05D009532 4.6e-13 77.4 67 61.2
MCO12G297 Micromonas commoda HOM05D007549 ORTHO05D009532 3.3e-11 71.2 66 56.1
BraSC58t46430Z Brassica rapa HOM05D007549 ORTHO05D009532 6.2e-10 67.0 37 83.8
Nitab4.5_0011882g0050 Nicotiana tabacum HOM05D008505 ORTHO05D010735 1.4e-09 65.9 38 84.2
PRCOL_00001223 Prasinoderma coloniale HOM05D007549 ORTHO05D009532 2.4e-09 65.1 66 53.0
Cre10.g462950 Chlamydomonas reinhardtii HOM05D007549 ORTHO05D009532 3.4e-08 61.2 65 49.2


User provided reference genes

Program Settings