Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011520 Sechium edule HOM05D005226 ORTHO05D004666 3.6e-55 218.0 111 100.0
Sed0027353 Sechium edule HOM05D005226 ORTHO05D004666 1.1e-40 169.9 113 76.1
MELO3C002462.2 Cucumis melo HOM05D005226 ORTHO05D004666 1.3e-39 166.4 102 80.4
CsaV3_1G010830 Cucumis sativus L. HOM05D005226 ORTHO05D004666 2.1e-39 165.6 110 75.5
ClCG03G004790 Citrullus lanatus HOM05D005226 ORTHO05D004666 2.4e-38 162.2 103 77.7
MD05G1344200 Malus domestica HOM05D005226 ORTHO05D004666 2.8e-23 112.1 116 53.4
FAN25G2807 Fragaria x ananassa HOM05D005226 ORTHO05D004666 1.1e-22 110.2 106 56.6
Prupe.4G022200 Prunus persica HOM05D005226 ORTHO05D004666 4.0e-22 108.2 114 54.4
FvH4_3g02270 Fragaria vesca HOM05D005226 ORTHO05D004666 6.9e-22 107.5 106 54.7
RcHm_v2.0_Chr5g0003391 Rosa chinensis HOM05D005226 ORTHO05D004666 9.0e-22 107.1 106 54.7
CANSAT56G2875 Cannabis sativa HOM05D005226 ORTHO05D004666 1.2e-21 106.7 109 54.1
TPR.G7637 Trifolium pratense HOM05D005226 ORTHO05D004666 3.4e-21 105.1 110 53.6
MD00G1206700 Malus domestica HOM05D005226 ORTHO05D004666 5.8e-21 104.4 116 50.9
MD10G1320200 Malus domestica HOM05D005226 ORTHO05D004666 5.8e-21 104.4 116 50.9
ClCG01G022050 Citrullus lanatus HOM05D005226 ORTHO05D004666 2.9e-20 102.1 106 51.9
Medtr2g022960 Medicago truncatula HOM05D005226 ORTHO05D004666 6.5e-20 100.9 110 50.9
CsaV3_6G049110 Cucumis sativus L. HOM05D005226 ORTHO05D004666 1.1e-19 100.1 110 50.9
Gohir.A10G013400 Gossypium hirsutum HOM05D005226 ORTHO05D004666 7.9e-18 94.0 98 52.0
MELO3C007384.2 Cucumis melo HOM05D005226 ORTHO05D004666 1.0e-17 93.6 110 48.2
Gohir.D10G013300 Gossypium hirsutum HOM05D005226 ORTHO05D004666 1.0e-17 93.6 98 52.0
Gorai.011G015000 Gossypium raimondii HOM05D005226 ORTHO05D004666 1.0e-17 93.6 98 52.0
COL.COLO4_31758 Corchorus olitorius HOM05D005226 ORTHO05D004666 1.3e-17 93.2 107 46.7
Aqoxy1G03603 Aquilegia oxysepala HOM05D005226 ORTHO05D004666 6.7e-17 90.9 104 50.0
Gohir.A05G169600 Gossypium hirsutum HOM05D005226 ORTHO05D004666 6.7e-17 90.9 99 50.5
Gorai.009G178000 Gossypium raimondii HOM05D005226 ORTHO05D004666 6.7e-17 90.9 99 50.5
Duzib160G0401 Durio zibethinus HOM05D005226 ORTHO05D004666 1.1e-16 90.1 98 51.0
Lj6g0027274 Lotus japonicus HOM05D005226 ORTHO05D004666 1.1e-16 90.1 110 43.6
VMungo0540G0286 Vigna mungo HOM05D005226 ORTHO05D004666 1.1e-16 90.1 112 42.9
Thecc.06G219100 Theobroma cacao HOM05D005226 ORTHO05D004666 1.9e-16 89.4 98 52.0
Cc09_g01800 Coffea canephora HOM05D005226 ORTHO05D004666 2.5e-16 89.0 96 49.0
Duzib235G0113 Durio zibethinus HOM05D005226 ORTHO05D004666 3.3e-16 88.6 98 48.0
Sabra04G0009100 Salix brachista HOM05D005226 ORTHO05D004666 3.3e-16 88.6 99 49.5
Migut.M01309 Erythranthe guttata HOM05D005226 ORTHO05D004666 5.7e-16 87.8 97 44.3
Eucgr.E04074 Eucalyptus grandis HOM05D005226 ORTHO05D004666 5.7e-16 87.8 107 43.9
Gohir.D05G172800 Gossypium hirsutum HOM05D005226 ORTHO05D004666 5.7e-16 87.8 99 49.5
Phvul.006G150300 Phaseolus vulgaris HOM05D005226 ORTHO05D004666 5.7e-16 87.8 114 43.9
Sed0005209 Sechium edule HOM05D005226 ORTHO05D004666 5.7e-16 87.8 108 47.2
TAR624G0719 Trochodendron aralioides HOM05D005226 ORTHO05D004666 5.7e-16 87.8 109 47.7
CiPaw.10G070100 Carya illinoinensis HOM05D005226 ORTHO05D004666 9.7e-16 87.0 101 45.5
CAN.G569.14 Capsicum annuum HOM05D005226 ORTHO05D004666 1.6e-15 86.3 108 42.6
Nitab4.5_0003254g0050 Nicotiana tabacum HOM05D005226 ORTHO05D004666 1.6e-15 86.3 96 45.8
TWI38G0534 Tripterygium wilfordii HOM05D005226 ORTHO05D004666 1.6e-15 86.3 97 45.4
Oeu051213.1 Olea europaea HOM05D005226 ORTHO05D004666 2.8e-15 85.5 95 46.3
Ciclev10017536m.g Citrus clementina HOM05D005226 ORTHO05D004666 3.7e-15 85.1 100 45.0
DCAR_004212 Daucus carota HOM05D005226 ORTHO05D004666 3.7e-15 85.1 100 46.0
TAR627G0695 Trochodendron aralioides HOM05D005226 ORTHO05D004666 3.7e-15 85.1 97 46.4
Glyma.13G205400 Glycine max HOM05D005226 ORTHO05D004666 4.8e-15 84.7 114 40.4
SGA_v2.0_scaffold4G01918 Striga asiatica HOM05D005226 ORTHO05D004666 6.3e-15 84.3 95 47.4
Thecc.06G087600 Theobroma cacao HOM05D005226 ORTHO05D004666 6.3e-15 84.3 96 49.0
Duzib192G0836 Durio zibethinus HOM05D005226 ORTHO05D004666 8.2e-15 84.0 96 47.9
Glyma.15G107000 Glycine max HOM05D005226 ORTHO05D004666 8.2e-15 84.0 112 40.2
PGR004G1778 Punica granatum HOM05D005226 ORTHO05D004666 8.2e-15 84.0 104 43.3
QL05p073519 Quercus lobata HOM05D005226 ORTHO05D004666 1.1e-14 83.6 103 45.6
QL05p073756 Quercus lobata HOM05D005226 ORTHO05D004666 1.1e-14 83.6 103 45.6
Eucgr.D01311 Eucalyptus grandis HOM05D005226 ORTHO05D004666 3.1e-14 82.0 106 44.3
Aqoxy4G01362 Aquilegia oxysepala HOM05D005226 ORTHO05D004666 4.1e-14 81.6 78 53.8
Oeu033894.1 Olea europaea HOM05D005226 ORTHO05D004666 4.1e-14 81.6 110 37.3
Potri.011G002100 Populus trichocarpa HOM05D005226 ORTHO05D004666 4.1e-14 81.6 102 46.1
Eucgr.D01314 Eucalyptus grandis HOM05D005226 ORTHO05D004666 5.3e-14 81.3 106 44.3
Lalb_Chr15g0087551 Lupinus albus HOM05D005226 ORTHO05D004666 6.9e-14 80.9 110 39.1
CiPaw.09G090600 Carya illinoinensis HOM05D005226 ORTHO05D004666 9.0e-14 80.5 91 48.4
Eucgr.L02166 Eucalyptus grandis HOM05D005226 ORTHO05D004666 9.0e-14 80.5 106 43.4
Solyc02g080450.1 Solanum lycopersicum HOM05D005226 ORTHO05D004666 9.0e-14 80.5 87 48.3
Sopen02g025140 Solanum pennellii HOM05D005226 ORTHO05D004666 9.0e-14 80.5 87 48.3
Potri.004G016800 Populus trichocarpa HOM05D005226 ORTHO05D004666 1.2e-13 80.1 99 46.5
Nitab4.5_0000005g0440 Nicotiana tabacum HOM05D005226 ORTHO05D004666 1.5e-13 79.7 115 39.1
Eucgr.E04071 Eucalyptus grandis HOM05D005226 ORTHO05D004666 2.0e-13 79.3 107 41.1
Eucgr.E04072 Eucalyptus grandis HOM05D005226 ORTHO05D004666 2.0e-13 79.3 95 45.3
Haze_06787 Corylus avellana HOM05D005226 ORTHO05D004666 3.4e-13 78.6 108 46.3
Nn5g29365 Nelumbo nucifera HOM05D005226 ORTHO05D004666 3.4e-13 78.6 114 43.9
Dinv20040 Davidia involucrata HOM05D005226 ORTHO05D004666 4.5e-13 78.2 95 49.5
Nn1g03549 Nelumbo nucifera HOM05D005226 ORTHO05D004666 4.5e-13 78.2 112 38.4
Hma1.2p1_1142F.1_g260990 Hydrangea macrophylla HOM05D005226 ORTHO05D004666 5.9e-13 77.8 96 47.9
MSTRG.13145 Avicennia marina HOM05D005226 ORTHO05D004666 1.0e-12 77.0 81 49.4
Lsat_1_v5_gn_4_59601 Lactuca sativa HOM05D005226 ORTHO05D004666 1.3e-12 76.6 92 44.6
Lalb_Chr18g0056301 Lupinus albus HOM05D005226 ORTHO05D004666 2.9e-12 75.5 110 38.2
Atru.chr10.2207 Acer truncatum HOM05D005226 ORTHO05D004666 3.8e-12 75.1 103 44.7
Cfa000235 Carpinus fangiana HOM05D005226 ORTHO05D004666 3.8e-12 75.1 104 44.2
DCAR_008143 Daucus carota HOM05D005226 ORTHO05D004666 6.5e-12 74.3 93 43.0
Nitab4.5_0000389g0060 Nicotiana tabacum HOM05D005226 ORTHO05D004666 6.5e-12 74.3 84 45.2
Nitab4.5_0006137g0040 Nicotiana tabacum HOM05D005226 ORTHO05D004666 6.5e-12 74.3 82 46.3
Rhsim02G0108700 Rhododendron simsii HOM05D005226 ORTHO05D004666 8.5e-12 73.9 85 44.7
Rhsim02G0109500 Rhododendron simsii HOM05D005226 ORTHO05D004666 8.5e-12 73.9 85 44.7
PGSC0003DMG400016491 Solanum tuberosum HOM05D005226 ORTHO05D004666 8.5e-12 73.9 83 47.0
ECA234G1355 Erigeron canadensis HOM05D005226 ORTHO05D004666 1.1e-11 73.6 92 41.3
Manes.16G008100 Manihot esculenta HOM05D005226 ORTHO05D004666 1.1e-11 73.6 89 43.8
Peaxi162Scf00262g00094 Petunia axillaris HOM05D005226 ORTHO05D004666 1.1e-11 73.6 90 43.3
Cfa021903 Carpinus fangiana HOM05D005226 ORTHO05D004666 1.4e-11 73.2 79 49.4
Haze_09878 Corylus avellana HOM05D005226 ORTHO05D004666 2.5e-11 72.4 112 42.0
Gorai.010G180000 Gossypium raimondii HOM05D005226 ORTHO05D004666 2.5e-11 72.4 68 52.9
Rhsim02G0108200 Rhododendron simsii HOM05D005226 ORTHO05D004666 3.2e-11 72.0 82 45.1
Glyma.18G063800 Glycine max HOM05D005226 ORTHO05D004666 4.2e-11 71.6 96 44.8
HanXRQChr16g0515991 Helianthus annuus HOM05D005226 ORTHO05D004666 4.2e-11 71.6 87 43.7
Gohir.A06G148050 Gossypium hirsutum HOM05D005226 ORTHO05D004666 5.5e-11 71.2 68 52.9
PSO832G1518 Papaver somniferum HOM05D005226 ORTHO05D004666 1.2e-10 70.1 102 46.1
Peaxi162Scf00565g00021 Petunia axillaris HOM05D005226 ORTHO05D004666 1.2e-10 70.1 84 41.7
Gohir.D06G153975 Gossypium hirsutum HOM05D005226 ORTHO05D004666 2.1e-10 69.3 68 51.5
EL10Ac8g20036 Beta vulgaris HOM05D005226 ORTHO05D004666 3.6e-10 68.6 74 51.4
PGR042G2779 Punica granatum HOM05D005226 ORTHO05D004666 6.1e-10 67.8 90 42.2
PGSC0003DMG400004522 Solanum tuberosum HOM05D005226 ORTHO05D004666 6.1e-10 67.8 89 39.3
ATR0752G088 Amborella trichopoda HOM05D005226 ORTHO05D004666 7.9e-10 67.4 81 45.7
Rhsim02G0109000 Rhododendron simsii HOM05D005226 ORTHO05D004666 1.8e-09 66.2 80 43.8
unitig_26.g9388 Utricularia gibba HOM05D005226 ORTHO05D004666 1.8e-09 66.2 93 45.2
Peaxi162Scf00565g00036 Petunia axillaris HOM05D005226 ORTHO05D004666 2.3e-09 65.9 85 43.5
SGA_v2.0_scaffold89G27461 Striga asiatica HOM05D005226 ORTHO05D004666 5.1e-09 64.7 69 44.9
Medtr3g463740 Medicago truncatula HOM05D005226 ORTHO05D004666 8.8e-09 63.9 62 48.4
MBI18_g02740_MAGBIO Magnolia biondii HOM05D005226 ORTHO05D004666 1.5e-08 63.2 100 37.0
PSO210G5560 Papaver somniferum HOM05D005226 ORTHO05D004666 2.5e-08 62.4 93 40.9
arahy.Tifrunner.gnm1.ann1.0GES1T Arachis hypogaea HOM05D005226 ORTHO05D004666 7.4e-08 60.8 67 49.3
arahy.Tifrunner.gnm1.ann1.1P1WAU Arachis hypogaea HOM05D005226 ORTHO05D004666 7.4e-08 60.8 67 49.3
THA.LOC104818840 Tarenaya hassleriana HOM05D005226 ORTHO05D004666 9.7e-08 60.5 85 38.8
TPR.G21187 Trifolium pratense HOM05D005226 ORTHO05D004666 9.7e-08 60.5 68 42.6
SalBow8G4932 Salvia bowleyana HOM05D005226 ORTHO05D004666 1.7e-07 59.7 83 42.2
arahy.Tifrunner.gnm1.ann1.89FC4C Arachis hypogaea HOM05D005226 ORTHO05D004666 4.8e-07 58.2 71 46.5
C08p14770 Brassica napus HOM05D005226 ORTHO05D004666 1.8e-06 56.2 107 33.6
Thhalv10029169m.g Eutrema salsugineum HOM05D009543 ORTHO05D004666 1.8e-06 56.2 77 41.6
CARHR011960 Cardamine hirsuta HOM05D005226 ORTHO05D004666 4.1e-06 55.1 111 34.2
Thhalv10009573m.g Eutrema salsugineum HOM05D005226 ORTHO05D004666 6.9e-06 54.3 89 36.0
Aa31LG1G3110 Aethionema arabicum HOM05D005226 ORTHO05D004666 9.1e-06 53.9 86 31.4
BcaB01g02575 Brassica carinata HOM05D009543 ORTHO05D004666 9.1e-06 53.9 68 44.1
Carub.0001s1129 Capsella rubella HOM05D005226 ORTHO05D004666 9.1e-06 53.9 73 39.7


User provided reference genes

Program Settings