Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 8.0e-70 266.9 131 100.0
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 2.1e-54 215.7 130 81.5
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 6.2e-54 214.2 130 80.0
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.6e-49 199.5 127 73.2
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 2.7e-49 198.7 129 75.2
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 2.7e-49 198.7 128 71.9
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 4.6e-49 198.0 126 77.0
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 3.0e-48 195.3 129 72.9
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 8.6e-48 193.7 131 70.2
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 1.5e-47 193.0 125 71.2
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 2.5e-47 192.2 128 69.5
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 4.3e-47 191.4 134 67.2
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.1e-45 186.8 128 72.7
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 2.4e-45 185.7 129 68.2
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 4.0e-45 184.9 142 64.1
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 4.0e-45 184.9 118 75.4
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 4.0e-45 184.9 125 71.2
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 5.2e-45 184.5 128 69.5
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 5.2e-45 184.5 118 72.0
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 6.8e-45 184.1 130 65.4
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 8.9e-45 183.7 128 68.8
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 8.9e-45 183.7 127 68.5
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 4.4e-44 181.4 136 66.9
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 5.8e-44 181.0 131 69.5
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 7.6e-44 180.6 120 74.2
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 9.9e-44 180.3 118 71.2
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 2.2e-43 179.1 133 66.2
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 2.9e-43 178.7 128 68.0
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 2.9e-43 178.7 130 66.2
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 3.8e-43 178.3 120 70.0
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 4.9e-43 177.9 131 67.2
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 8.4e-43 177.2 120 73.3
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 1.1e-42 176.8 131 64.1
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.4e-42 176.4 129 69.0
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 1.9e-42 176.0 127 67.7
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 2.4e-42 175.6 131 64.1
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.4e-42 175.6 129 69.0
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 3.2e-42 175.3 130 64.6
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.2e-42 175.3 129 69.0
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 4.2e-42 174.9 127 66.1
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 9.3e-42 173.7 155 58.7
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.2e-41 173.3 129 62.8
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 1.2e-41 173.3 130 63.8
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 1.2e-41 173.3 117 70.1
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 1.6e-41 172.9 135 62.2
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 1.6e-41 172.9 134 62.7
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.6e-41 172.9 129 62.8
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 2.7e-41 172.2 135 64.4
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 2.7e-41 172.2 129 68.2
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.5e-41 171.8 128 66.4
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 3.5e-41 171.8 118 72.9
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.7e-40 169.5 118 69.5
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.7e-40 169.5 127 63.8
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 1.7e-40 169.5 127 63.8
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 1.7e-40 169.5 127 61.4
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 3.0e-40 168.7 117 67.5
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 8.7e-40 167.2 119 68.1
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 1.1e-39 166.8 137 59.9
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.5e-39 166.4 133 63.9
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 1.9e-39 166.0 130 64.6
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.5e-39 165.6 126 65.1
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 2.5e-39 165.6 130 62.3
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 2.5e-39 165.6 120 68.3
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 3.3e-39 165.2 130 60.0
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 5.6e-39 164.5 129 59.7
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 5.6e-39 164.5 118 69.5
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 9.6e-39 163.7 118 66.1
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 9.6e-39 163.7 138 58.7
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.3e-38 163.3 118 66.9
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.6e-38 162.9 128 64.8
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.1e-38 162.5 119 69.7
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 2.1e-38 162.5 139 62.6
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 4.8e-38 161.4 118 66.1
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 6.2e-38 161.0 120 62.5
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 6.2e-38 161.0 130 56.2
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 1.1e-37 160.2 116 62.1
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.1e-37 160.2 118 62.7
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 3.1e-37 158.7 124 64.5
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.5e-36 156.4 125 63.2
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 2.6e-36 155.6 120 64.2
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 2.6e-36 155.6 120 63.3
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 5.8e-36 154.5 126 60.3
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 1.3e-35 153.3 125 60.8
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 1.7e-35 152.9 126 63.5
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 1.7e-35 152.9 128 60.9
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 1.1e-34 150.2 118 61.0
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 3.2e-34 148.7 119 63.0
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 5.4e-34 147.9 120 62.5
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 9.3e-34 147.1 120 61.7
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 9.3e-34 147.1 119 63.0
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 1.2e-33 146.7 120 63.3
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 1.6e-33 146.4 120 64.2
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 6.0e-33 144.4 120 61.7
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 6.0e-33 144.4 119 62.2
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 6.0e-33 144.4 119 62.2
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 1.0e-32 143.7 120 60.8
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 2.3e-32 142.5 119 61.3
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 2.3e-32 142.5 119 61.3
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 2.3e-32 142.5 119 61.3
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 4.3e-31 138.3 150 50.0
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 4.0e-29 131.7 134 56.0
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 2.0e-28 129.4 118 57.6
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 1.3e-27 126.7 141 52.5
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 1.2e-25 120.2 78 70.5
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 3.9e-24 115.2 119 48.7
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.5e-23 113.2 128 46.1
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 1.5e-23 113.2 135 48.9
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 6.2e-22 107.8 64 73.4
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 2.9e-19 99.0 57 75.4
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.6e-17 93.2 80 58.8
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 1.8e-16 89.7 81 61.7
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 3.0e-16 89.0 138 36.2
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 7.4e-15 84.3 50 70.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 4.5e-12 75.1 120 38.3
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 2.9e-11 72.4 109 37.6


User provided reference genes

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