Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011431 Sechium edule HOM05D007096 ORTHO05D008288 1.3e-45 186.0 96 100.0
Sed0013252 Sechium edule HOM05D007096 ORTHO05D008288 1.0e-34 149.8 95 81.1
MELO3C017172.2 Cucumis melo HOM05D007096 ORTHO05D008288 7.5e-25 117.1 100 70.0
CsaV3_1G002320 Cucumis sativus L. HOM05D007096 ORTHO05D008288 4.1e-23 111.3 102 68.6
Prupe.5G193600 Prunus persica HOM05D007096 ORTHO05D008288 4.6e-14 81.3 99 54.5
COL.COLO4_09292 Corchorus olitorius HOM05D007096 ORTHO05D008288 1.0e-13 80.1 98 52.0
RcHm_v2.0_Chr7g0181441 Rosa chinensis HOM05D007096 ORTHO05D008288 3.9e-13 78.2 97 53.6
QL10p017020 Quercus lobata HOM05D007096 ORTHO05D008288 6.6e-13 77.4 76 55.3
arahy.Tifrunner.gnm1.ann1.2U9IP4 Arachis hypogaea HOM05D007096 ORTHO05D008288 3.3e-12 75.1 72 59.7
CiPaw.12G013300 Carya illinoinensis HOM05D007096 ORTHO05D008288 4.3e-12 74.7 78 55.1
FAN13G0716 Fragaria x ananassa HOM05D007096 ORTHO05D008288 5.6e-12 74.3 97 49.5
FAN08G2460 Fragaria x ananassa HOM05D007096 ORTHO05D008288 7.3e-12 73.9 97 49.5
Glyma.17G100200 Glycine max HOM05D007096 ORTHO05D008288 9.6e-12 73.6 88 53.4
Ciclev10023845m.g Citrus clementina HOM05D007096 ORTHO05D008288 1.6e-11 72.8 83 55.4
Manes.06G092300 Manihot esculenta HOM05D007096 ORTHO05D008288 1.6e-11 72.8 96 49.0
CiPaw.11G044600 Carya illinoinensis HOM05D007096 ORTHO05D008288 2.8e-11 72.0 77 51.9
DCAR_016556 Daucus carota HOM05D007096 ORTHO05D008288 3.6e-11 71.6 84 48.8
ClCG04G012240 Citrullus lanatus HOM05D007096 ORTHO05D008288 4.7e-11 71.2 97 44.3
Manes.14G078100 Manihot esculenta HOM05D007096 ORTHO05D008288 4.7e-11 71.2 96 46.9
Thecc.03G087500 Theobroma cacao HOM05D007096 ORTHO05D008288 8.1e-11 70.5 97 48.5
Gohir.A12G177500 Gossypium hirsutum HOM05D007096 ORTHO05D008288 1.8e-10 69.3 98 44.9
Gohir.D12G179900 Gossypium hirsutum HOM05D007096 ORTHO05D008288 1.8e-10 69.3 98 45.9
Lsat_1_v5_gn_5_19601 Lactuca sativa HOM05D007096 ORTHO05D008288 1.8e-10 69.3 73 49.3
Lj4g0000471 Lotus japonicus HOM05D007096 ORTHO05D008288 2.4e-10 68.9 73 49.3
Gorai.008G193000 Gossypium raimondii HOM05D007096 ORTHO05D008288 3.1e-10 68.6 98 44.9
Oeu047297.1 Olea europaea HOM05D007096 ORTHO05D008288 3.1e-10 68.6 98 40.8
PGSC0003DMG400023201 Solanum tuberosum HOM05D007096 ORTHO05D008288 3.1e-10 68.6 90 50.0
CsaV3_1G005510 Cucumis sativus L. HOM05D007096 ORTHO05D008288 4.0e-10 68.2 97 42.3
Phvul.009G187200 Phaseolus vulgaris HOM05D007096 ORTHO05D008288 5.2e-10 67.8 88 50.0
Glyma.04G169400 Glycine max HOM05D007096 ORTHO05D008288 8.9e-10 67.0 87 49.4
Lj1g0007220 Lotus japonicus HOM05D007096 ORTHO05D008288 1.5e-09 66.2 97 47.4
Atru.chr9.225 Acer truncatum HOM05D007096 ORTHO05D008288 2.0e-09 65.9 84 48.8
Cc00_g23090 Coffea canephora HOM05D007096 ORTHO05D008288 2.0e-09 65.9 96 44.8
CSS0038065 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 2.6e-09 65.5 98 45.9
Sed0025401 Sechium edule HOM05D007096 ORTHO05D008288 2.6e-09 65.5 97 41.2
Glyma.06G194000 Glycine max HOM05D007096 ORTHO05D008288 9.9e-09 63.5 87 48.3
Phvul.003G190100 Phaseolus vulgaris HOM05D007096 ORTHO05D008288 1.7e-08 62.8 88 46.6
MELO3C001984.2 Cucumis melo HOM05D007096 ORTHO05D008288 3.8e-08 61.6 77 44.2
Medtr3g037730 Medicago truncatula HOM05D007096 ORTHO05D008288 3.8e-08 61.6 85 48.2
Sed0019012 Sechium edule HOM05D007096 ORTHO05D008288 3.8e-08 61.6 105 37.1
Lalb_Chr13g0303241 Lupinus albus HOM05D007096 ORTHO05D008288 6.4e-08 60.8 85 44.7
Nn3g17242 Nelumbo nucifera HOM05D007096 ORTHO05D008288 6.4e-08 60.8 88 44.3
TAR629G1384 Trochodendron aralioides HOM05D000618 ORTHO05D000454 1.1e-07 60.1 90 46.7
Dinv19962 Davidia involucrata HOM05D007096 ORTHO05D008288 1.4e-07 59.7 71 52.1
Nn4g23168 Nelumbo nucifera HOM05D007096 ORTHO05D008288 7.1e-07 57.4 95 41.1
FAN04G0033 Fragaria x ananassa HOM05D007096 ORTHO05D008288 9.3e-07 57.0 93 44.1
Migut.D01817 Erythranthe guttata HOM05D007096 ORTHO05D008288 1.6e-06 56.2 35 74.3
Ciclev10033178m.g Citrus clementina HOM05D007096 ORTHO05D008288 2.1e-06 55.8 96 38.5
Prupe.1G274800 Prunus persica HOM05D007096 ORTHO05D008288 2.1e-06 55.8 98 37.8
Glyma.05G026700 Glycine max HOM05D007096 ORTHO05D008288 2.7e-06 55.5 45 64.4
Thecc.02G346100 Theobroma cacao HOM05D007096 ORTHO05D008288 2.7e-06 55.5 91 40.7
SalBow7G4253 Salvia bowleyana HOM05D007096 ORTHO05D008288 3.5e-06 55.1 90 43.3
TAR374G0516 Trochodendron aralioides HOM05D007096 ORTHO05D008288 7.8e-06 53.9 90 37.8


User provided reference genes

Program Settings