Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011430 Sechium edule HOM05D003295 ORTHO05D048359 1.5e-21 105.1 50 100.0
QL02p067876 Quercus lobata HOM05D003295 ORTHO05D004003 3.4e-21 104.0 49 98.0
Sed0020610 Sechium edule HOM05D003295 ORTHO05D004003 3.4e-21 104.0 49 98.0
arahy.Tifrunner.gnm1.ann1.9C1MNQ Arachis hypogaea HOM05D003295 ORTHO05D004003 7.7e-21 102.8 49 95.9
arahy.Tifrunner.gnm1.ann1.Q2QQQQ Arachis hypogaea HOM05D003295 ORTHO05D004003 7.7e-21 102.8 49 95.9
ClCG07G007340 Citrullus lanatus HOM05D003295 ORTHO05D004003 7.7e-21 102.8 49 95.9
MELO3C016067.2 Cucumis melo HOM05D003295 ORTHO05D004003 7.7e-21 102.8 49 95.9
CsaV3_4G008760 Cucumis sativus L. HOM05D003295 ORTHO05D004003 7.7e-21 102.8 49 95.9
Lalb_Chr01g0022051 Lupinus albus HOM05D003295 ORTHO05D004003 7.7e-21 102.8 49 95.9
CiPaw.03G090100 Carya illinoinensis HOM05D003295 ORTHO05D004003 1.7e-20 101.7 49 93.9
CiPaw.04G057100 Carya illinoinensis HOM05D003295 ORTHO05D004003 1.7e-20 101.7 49 93.9
Atru.chr1.3425 Acer truncatum HOM05D003295 ORTHO05D004003 2.2e-20 101.3 49 93.9
Atru.chr8.417 Acer truncatum HOM05D003295 ORTHO05D004003 2.2e-20 101.3 49 93.9
Ciclev10011465m.g Citrus clementina HOM05D003295 ORTHO05D004003 2.2e-20 101.3 49 93.9
Glyma.08G346200 Glycine max HOM05D003295 ORTHO05D004003 2.9e-20 100.9 49 95.9
Glyma.18G156500 Glycine max HOM05D003295 ORTHO05D004003 2.9e-20 100.9 49 95.9
VMungo1383G2302 Vigna mungo HOM05D003295 ORTHO05D004003 2.9e-20 100.9 49 95.9
CANSAT64G1717 Cannabis sativa HOM05D003295 ORTHO05D004003 5.0e-20 100.1 49 91.8
Cfa007647 Carpinus fangiana HOM05D003295 ORTHO05D004003 5.0e-20 100.1 49 91.8
CDE02G3191 Ceratophyllum demersum HOM05D003295 ORTHO05D004003 5.0e-20 100.1 49 91.8
Actinidia01987 Actinidia chinensis HOM05D003295 ORTHO05D004003 6.5e-20 99.8 49 93.9
CDE05G2680 Ceratophyllum demersum HOM05D003295 ORTHO05D004003 6.5e-20 99.8 49 91.8
Eucgr.H00078 Eucalyptus grandis HOM05D003295 ORTHO05D004003 6.5e-20 99.8 49 91.8
Lju41A4G62 Lonicera japonica HOM05D003295 ORTHO05D004003 6.5e-20 99.8 49 93.9
Lj1g0018629 Lotus japonicus HOM05D003295 ORTHO05D004003 6.5e-20 99.8 49 93.9
Lalb_Chr03g0041311 Lupinus albus HOM05D003295 ORTHO05D004003 6.5e-20 99.8 49 93.9
Manes.01G097600 Manihot esculenta HOM05D003295 ORTHO05D004003 6.5e-20 99.8 49 91.8
PGR102G1979 Punica granatum HOM05D003295 ORTHO05D004003 6.5e-20 99.8 49 93.9
Sc20g0001850 Simmondsia chinensis HOM05D003295 ORTHO05D004003 6.5e-20 99.8 49 93.9
GSVIVG01011510001 Vitis vinifera HOM05D003295 ORTHO05D004003 6.5e-20 99.8 49 93.9
Ah.10g032630 Amaranthus hybridus HOM05D003295 ORTHO05D004003 8.5e-20 99.4 49 91.8
EL10Ac2g03303 Beta vulgaris HOM05D003295 ORTHO05D004003 8.5e-20 99.4 49 91.8
Ca_22313_v3 Cicer arietinum L. HOM05D003295 ORTHO05D004003 8.5e-20 99.4 49 93.9
Medtr7g053330 Medicago truncatula HOM05D003295 ORTHO05D004003 8.5e-20 99.4 49 93.9
Psat0s3048g0160 Pisum sativum HOM05D003295 ORTHO05D004003 8.5e-20 99.4 49 93.9
TPR.G1214 Trifolium pratense HOM05D003295 ORTHO05D004003 8.5e-20 99.4 49 93.9
CSS0007751 Camellia sinensis var. sinensis HOM05D003295 ORTHO05D004003 1.1e-19 99.0 49 91.8
CSS0035256 Camellia sinensis var. sinensis HOM05D003295 ORTHO05D004003 1.1e-19 99.0 49 91.8
Thecc.04G092700 Theobroma cacao HOM05D003295 ORTHO05D004003 1.1e-19 99.0 49 89.8
VMungo0331G1826 Vigna mungo HOM05D003295 ORTHO05D004003 1.1e-19 99.0 49 91.8
Haze_14446 Corylus avellana HOM05D003295 ORTHO05D004003 1.4e-19 98.6 49 91.8
TAR629G1991 Trochodendron aralioides HOM05D003295 ORTHO05D004003 1.4e-19 98.6 49 91.8
Duzib187G0484 Durio zibethinus HOM05D003295 ORTHO05D004003 1.9e-19 98.2 49 89.8
Glyma.16G087200 Glycine max HOM05D003295 ORTHO05D004003 1.9e-19 98.2 49 91.8
Gohir.D09G009500 Gossypium hirsutum HOM05D003295 ORTHO05D004003 1.9e-19 98.2 49 89.8
Gorai.006G011200 Gossypium raimondii HOM05D003295 ORTHO05D004003 1.9e-19 98.2 49 89.8
Lj4C117T4 Lonicera japonica HOM05D003295 ORTHO05D004003 1.9e-19 98.2 49 91.8
AUR62018251 Chenopodium quinoa HOM05D003295 ORTHO05D004003 2.5e-19 97.8 49 89.8
AUR62037753 Chenopodium quinoa HOM05D003295 ORTHO05D004003 2.5e-19 97.8 49 89.8
MBI19_g19066_MAGBIO Magnolia biondii HOM05D003295 ORTHO05D004003 2.5e-19 97.8 49 89.8
Nn3g17409 Nelumbo nucifera HOM05D003295 ORTHO05D004003 2.5e-19 97.8 49 91.8
Phvul.010G024900 Phaseolus vulgaris HOM05D003295 ORTHO05D004003 2.5e-19 97.8 49 89.8
TAR371G0606 Trochodendron aralioides HOM05D003295 ORTHO05D004003 2.5e-19 97.8 49 91.8
TWI32G0949 Tripterygium wilfordii HOM05D003295 ORTHO05D004003 3.2e-19 97.4 49 89.8
vmacro01094 Vaccinium macrocarpon HOM05D003295 ORTHO05D004003 3.2e-19 97.4 49 89.8
Gohir.A09G010400 Gossypium hirsutum HOM05D003295 ORTHO05D004003 4.2e-19 97.1 49 87.8
Manes.02G053700 Manihot esculenta HOM05D003295 ORTHO05D004003 4.2e-19 97.1 49 87.8
CSS0003522 Camellia sinensis var. sinensis HOM05D003295 ORTHO05D004003 7.2e-19 96.3 49 91.8
Rhsim10G0043800 Rhododendron simsii HOM05D003295 ORTHO05D004003 7.2e-19 96.3 49 89.8
Ah.16g106000 Amaranthus hybridus HOM05D003295 ORTHO05D004003 9.4e-19 95.9 49 89.8
Dinv16718 Davidia involucrata HOM05D003295 ORTHO05D004003 9.4e-19 95.9 49 87.8
Duzib264G1042 Durio zibethinus HOM05D003295 ORTHO05D004003 9.4e-19 95.9 49 87.8
Duzib147G0263 Durio zibethinus HOM05D003295 ORTHO05D004003 1.2e-18 95.5 49 87.8
MBI16_g11661_MAGBIO Magnolia biondii HOM05D003295 ORTHO05D004003 1.2e-18 95.5 49 89.8
CSS0045310 Camellia sinensis var. sinensis HOM05D003295 ORTHO05D004003 1.6e-18 95.1 49 89.8
Nitab4.5_0000565g0210 Nicotiana tabacum HOM05D003295 ORTHO05D004003 1.6e-18 95.1 49 85.7
Oeu000865.2 Olea europaea HOM05D003295 ORTHO05D004003 1.6e-18 95.1 49 87.8
ATR0064G024 Amborella trichopoda HOM05D003295 ORTHO05D004003 2.1e-18 94.7 49 87.8
CAN.G206.214 Capsicum annuum HOM05D003295 ORTHO05D004003 2.1e-18 94.7 49 85.7
Nitab4.5_0010051g0030 Nicotiana tabacum HOM05D003295 ORTHO05D004003 2.1e-18 94.7 49 85.7
Peaxi162Scf00166g00530 Petunia axillaris HOM05D003295 ORTHO05D004003 2.1e-18 94.7 49 85.7
Solyc02g088700.4 Solanum lycopersicum HOM05D003295 ORTHO05D004003 2.1e-18 94.7 49 85.7
Sopen02g033410 Solanum pennellii HOM05D003295 ORTHO05D004003 2.1e-18 94.7 49 85.7
PGSC0003DMG400001355 Solanum tuberosum HOM05D003295 ORTHO05D004003 2.1e-18 94.7 49 85.7
HPP92_006056 Vanilla planifolia HOM05D003295 ORTHO05D004003 2.1e-18 94.7 49 87.8
Cpa.g.sc14.163 Carica papaya HOM05D003295 ORTHO05D004003 3.6e-18 94.0 49 85.7
Dinv34954 Davidia involucrata HOM05D003295 ORTHO05D011096 3.6e-18 94.0 49 87.8
Gorai.007G081900 Gossypium raimondii HOM05D003295 ORTHO05D004003 3.6e-18 94.0 49 87.8
SEGI_03951 Sequoiadendron giganteum HOM05D003295 ORTHO05D004003 3.6e-18 94.0 49 85.7
MSTRG.15453 Avicennia marina HOM05D003295 ORTHO05D004003 4.6e-18 93.6 49 83.7
MSTRG.3010 Avicennia marina HOM05D003295 ORTHO05D004003 4.6e-18 93.6 49 87.8
CSS0002131 Camellia sinensis var. sinensis HOM05D003295 ORTHO05D024739 4.6e-18 93.6 49 87.8
Hund12049 Selenicereus undatus HOM05D003295 ORTHO05D004003 6.1e-18 93.2 49 87.8
Gohir.D11G076300 Gossypium hirsutum HOM05D003295 ORTHO05D004003 7.9e-18 92.8 49 87.8
Phvul.008G133900 Phaseolus vulgaris HOM05D003295 ORTHO05D004003 1.0e-17 92.4 49 87.8
MSTRG.3351 Avicennia marina HOM05D003295 ORTHO05D004003 1.4e-17 92.0 49 83.7
Sabra17G0081500 Salix brachista HOM05D003295 ORTHO05D004003 1.4e-17 92.0 49 83.7
HPP92_013435 Vanilla planifolia HOM05D003295 ORTHO05D004003 1.4e-17 92.0 49 85.7
HPP92_027113 Vanilla planifolia HOM05D003295 ORTHO05D004003 1.4e-17 92.0 49 85.7
vmacro05652 Vaccinium macrocarpon HOM05D003295 ORTHO05D004003 1.8e-17 91.7 47 87.2
Sp3g01150 Schrenkiella parvula HOM05D003295 ORTHO05D004003 2.3e-17 91.3 49 81.6
unitig_747.g21845 Utricularia gibba HOM05D003295 ORTHO05D004003 2.3e-17 91.3 49 79.6
Gohir.A11G072200 Gossypium hirsutum HOM05D003295 ORTHO05D004003 3.0e-17 90.9 49 85.7
Potri.017G092400 Populus trichocarpa HOM05D003295 ORTHO05D004003 5.1e-17 90.1 49 81.6
AL3G11320 Arabidopsis lyrata HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
AT3G02090 Arabidopsis thaliana HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
BcaC05g30323 Brassica carinata HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
BcaC05g30374 Brassica carinata HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
BcaC09g47684 Brassica carinata HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
A05p44910 Brassica napus HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
BNapus_Darmor_BZH_scaffold_97p00030 Brassica napus HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
C09p75490 Brassica napus HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
BolC1t05921H Brassica oleracea HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
BolC5t35110H Brassica oleracea HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
BraA05t23166Z Brassica rapa HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
Carub.0003s0120 Capsella rubella HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
Thhalv10020493m.g Eutrema salsugineum HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
Hma1.2p1_0357F.1_g134540 Hydrangea macrophylla HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 81.6
THA.LOC104802968 Tarenaya hassleriana HOM05D003295 ORTHO05D004003 6.7e-17 89.7 49 79.6
Migut.H00639 Erythranthe guttata HOM05D003295 ORTHO05D004003 1.1e-16 89.0 49 81.6
Lj6A781T30 Lonicera japonica HOM05D003295 ORTHO05D004003 1.1e-16 89.0 49 83.7
PSO541G2235 Papaver somniferum HOM05D003295 ORTHO05D004003 1.1e-16 89.0 49 81.6
PSO675G8937 Papaver somniferum HOM05D003295 ORTHO05D004003 1.1e-16 89.0 49 81.6
MD17G1057400 Malus domestica HOM05D003295 ORTHO05D004003 1.5e-16 88.6 49 81.6
Prupe.3G256900 Prunus persica HOM05D003295 ORTHO05D004003 1.5e-16 88.6 49 81.6
Aa31LG5G12630 Aethionema arabicum HOM05D003295 ORTHO05D004003 2.0e-16 88.2 49 77.6
CDE04G1519 Ceratophyllum demersum HOM05D003295 ORTHO05D004003 2.0e-16 88.2 49 81.6
Migut.K01281 Erythranthe guttata HOM05D003295 ORTHO05D004003 2.0e-16 88.2 49 79.6
SalBow1G0252 Salvia bowleyana HOM05D003295 ORTHO05D004003 2.5e-16 87.8 49 81.6
THA.LOC104821004 Tarenaya hassleriana HOM05D003295 ORTHO05D004003 3.3e-16 87.4 49 77.6
SHI25773 Sapria himalayana HOM05D003295 ORTHO05D004003 4.3e-16 87.0 46 82.6
DCAR_011045 Daucus carota HOM05D003295 ORTHO05D004003 5.7e-16 86.7 49 79.6
AagrBONN_evm.TU.Sc2ySwM_228.4053 Anthoceros agrestis HOM05D003295 ORTHO05D004003 7.4e-16 86.3 49 73.5
MD09G1064100 Malus domestica HOM05D003295 ORTHO05D004003 7.4e-16 86.3 49 77.6
BNapus_Darmor_BZH_scaffold_113p00140 Brassica napus HOM05D003295 ORTHO05D004003 9.7e-16 85.9 48 79.2
BraA01t04631Z Brassica rapa HOM05D003295 ORTHO05D004003 9.7e-16 85.9 48 79.2
COL.COLO4_21398 Corchorus olitorius HOM05D003295 ORTHO05D004003 9.7e-16 85.9 49 79.6
Potri.004G118900 Populus trichocarpa HOM05D003295 ORTHO05D004003 9.7e-16 85.9 49 75.5
Sabra04G0068800 Salix brachista HOM05D003295 ORTHO05D004003 9.7e-16 85.9 49 75.5
HanXRQChr12g0362991 Helianthus annuus HOM05D003295 ORTHO05D004003 1.3e-15 85.5 49 79.6
Lsat_1_v5_gn_8_47580 Lactuca sativa HOM05D003295 ORTHO05D004003 1.3e-15 85.5 49 79.6
Nitab4.5_0008450g0020 Nicotiana tabacum HOM05D003295 ORTHO05D004003 1.3e-15 85.5 49 77.6
FAN02G0360 Fragaria x ananassa HOM05D003295 ORTHO05D004003 1.7e-15 85.1 49 75.5
FAN05G1568 Fragaria x ananassa HOM05D003295 ORTHO05D004003 1.7e-15 85.1 49 75.5
FAN09G4456 Fragaria x ananassa HOM05D003295 ORTHO05D004003 1.7e-15 85.1 49 75.5
RcHm_v2.0_Chr2g0166151 Rosa chinensis HOM05D003295 ORTHO05D004003 1.7e-15 85.1 49 75.5
SMO117G0298 Selaginella moellendorffii HOM05D003295 ORTHO05D004003 1.7e-15 85.1 49 73.5
HanXRQChr08g0211871 Helianthus annuus HOM05D003295 ORTHO05D004003 2.2e-15 84.7 49 79.6
Cc07_g03950 Coffea canephora HOM05D003295 ORTHO05D004003 2.8e-15 84.3 49 77.6
Gohir.D04G044200 Gossypium hirsutum HOM05D003295 ORTHO05D004003 2.8e-15 84.3 49 73.5
Gorai.012G049500 Gossypium raimondii HOM05D003295 ORTHO05D004003 2.8e-15 84.3 49 73.5
ECA233G3242 Erigeron canadensis HOM05D003295 ORTHO05D004003 3.7e-15 84.0 49 77.6
FvH4_6g47100 Fragaria vesca HOM05D003295 ORTHO05D004003 3.7e-15 84.0 49 73.5
FAN14G2841 Fragaria x ananassa HOM05D003295 ORTHO05D004003 3.7e-15 84.0 49 73.5
Gohir.A05G371500 Gossypium hirsutum HOM05D003295 ORTHO05D004003 3.7e-15 84.0 49 73.5
Actinidia28640 Actinidia chinensis HOM05D003295 ORTHO05D004003 4.8e-15 83.6 49 71.4
Mapoly0009s0206 Marchantia polymorpha HOM05D003295 ORTHO05D004003 8.2e-15 82.8 49 73.5
Zm00001eb400330 Zea mays HOM05D003295 ORTHO05D004003 8.2e-15 82.8 49 77.6
CBR_g22269 Chara braunii HOM05D003295 ORTHO05D004003 1.1e-14 82.4 49 73.5
Nitab4.5_0002362g0060 Nicotiana tabacum HOM05D003295 ORTHO05D004003 1.1e-14 82.4 49 75.5
Solyc05g012480.4 Solanum lycopersicum HOM05D003295 ORTHO05D004003 1.1e-14 82.4 49 75.5
Sopen05g007290 Solanum pennellii HOM05D003295 ORTHO05D004003 1.1e-14 82.4 49 75.5
PGSC0003DMG400028380 Solanum tuberosum HOM05D003295 ORTHO05D004003 1.1e-14 82.4 49 75.5
CARHR076050 Cardamine hirsuta HOM05D003295 ORTHO05D004003 1.4e-14 82.0 49 71.4
Lsat_1_v5_gn_4_12421 Lactuca sativa HOM05D003295 ORTHO05D004003 1.8e-14 81.6 49 75.5
Os03g0212700 Oryza sativa ssp. japonica HOM05D003295 ORTHO05D004003 1.8e-14 81.6 49 77.6
SGA_v2.0_scaffold154G37095 Striga asiatica HOM05D003295 ORTHO05D004003 1.8e-14 81.6 48 79.2
CAN.G616.8 Capsicum annuum HOM05D003295 ORTHO05D004003 2.4e-14 81.3 49 73.5
Pp3c16_17660 Physcomitrium patens HOM05D003295 ORTHO05D004003 2.4e-14 81.3 49 73.5
Aqoxy3G00493 Aquilegia oxysepala HOM05D003295 ORTHO05D004003 3.1e-14 80.9 49 73.5
Zm00001eb008490 Zea mays HOM05D003295 ORTHO05D004003 3.1e-14 80.9 49 75.5
AL6G26380 Arabidopsis lyrata HOM05D003295 ORTHO05D004003 5.3e-14 80.1 49 69.4
GSVIVG01012193001 Vitis vinifera HOM05D003295 ORTHO05D004003 1.2e-13 79.0 49 65.3
Aqoxy3G03592 Aquilegia oxysepala HOM05D003295 ORTHO05D004003 2.0e-13 78.2 49 69.4
Cre12.g523850 Chlamydomonas reinhardtii HOM05D003295 ORTHO05D004003 2.0e-13 78.2 49 67.3
Hma1.2p1_0674F.1_g201580 Hydrangea macrophylla HOM05D003295 ORTHO05D004003 1.0e-12 75.9 46 71.7
Peaxi162Scf00314g00228 Petunia axillaris HOM05D003295 ORTHO05D004003 1.0e-12 75.9 46 71.7
MCO12G394 Micromonas commoda HOM05D003295 ORTHO05D004003 1.3e-12 75.5 49 69.4
Cfa023084 Carpinus fangiana HOM05D003295 ORTHO05D124303 5.0e-12 73.6 48 68.8
Lsat_1_v5_gn_2_7020 Lactuca sativa HOM05D003295 ORTHO05D048359 8.5e-12 72.8 40 80.0
DCAR_023806 Daucus carota HOM05D003295 ORTHO05D004003 1.4e-11 72.0 49 65.3
ECA234G2575 Erigeron canadensis HOM05D003295 ORTHO05D004003 1.4e-11 72.0 42 69.0
SEGI_32099 Sequoiadendron giganteum HOM05D003295 ORTHO05D004003 1.4e-11 72.0 49 67.3
Oeu028262.3 Olea europaea HOM05D003295 ORTHO05D004003 1.9e-11 71.6 41 70.7
Haze_26314 Corylus avellana HOM05D003295 ORTHO05D004003 2.5e-11 71.2 49 63.3
Zm00001eb361310 Zea mays HOM05D003295 ORTHO05D004003 2.5e-11 71.2 49 65.3
DCAR_005653 Daucus carota HOM05D003295 ORTHO05D004003 7.2e-11 69.7 47 66.0
ATR0749G047 Amborella trichopoda HOM05D003295 ORTHO05D004003 2.7e-10 67.8 49 63.3
HPP92_009140 Vanilla planifolia HOM05D003295 ORTHO05D004003 7.9e-10 66.2 49 61.2
PRCOL_00000027 Prasinoderma coloniale HOM05D003295 ORTHO05D004003 2.3e-09 64.7 49 55.1
Ah.03g139040 Amaranthus hybridus HOM05D003295 ORTHO05D004003 2.0e-08 61.6 48 54.2
EL10Ac6g14972 Beta vulgaris HOM05D003295 ORTHO05D004003 3.3e-08 60.8 43 58.1
Hund25189 Selenicereus undatus HOM05D003295 ORTHO05D004003 4.4e-08 60.5 47 53.2
AUR62003118 Chenopodium quinoa HOM05D003295 ORTHO05D004003 3.7e-07 57.4 47 53.2


User provided reference genes

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