Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011409 Sechium edule HOM05D006745 ORTHO05D008449 2.5e-138 495.4 238 100.0
Sed0008453 Sechium edule HOM05D006745 ORTHO05D008449 6.5e-86 321.2 262 67.9
MELO3C007934.2 Cucumis melo HOM05D006745 ORTHO05D008449 4.1e-80 302.0 260 64.6
CsaV3_6G047410 Cucumis sativus L. HOM05D006745 ORTHO05D008449 1.7e-78 296.6 260 63.5
ClCG01G020530 Citrullus lanatus HOM05D006745 ORTHO05D008449 3.6e-68 262.3 287 55.4
BcaC04g22678 Brassica carinata HOM05D006745 ORTHO05D008449 1.2e-60 237.3 246 53.7
BolC9t54579H Brassica oleracea HOM05D006745 ORTHO05D008449 1.2e-60 237.3 246 53.7
A09p13970 Brassica napus HOM05D006745 ORTHO05D008449 1.0e-59 234.2 247 53.4
BcaB07g31542 Brassica carinata HOM05D006745 ORTHO05D008449 1.4e-59 233.8 245 52.7
CANSAT01G0215 Cannabis sativa HOM05D006745 ORTHO05D008449 1.4e-59 233.8 239 54.4
GSVIVG01007224001 Vitis vinifera HOM05D006745 ORTHO05D008449 1.4e-59 233.8 257 51.4
Cfa007050 Carpinus fangiana HOM05D006745 ORTHO05D008449 3.1e-59 232.6 255 51.8
Lj2A482T63 Lonicera japonica HOM05D006745 ORTHO05D008449 3.1e-59 232.6 254 50.8
QL06p051396 Quercus lobata HOM05D006745 ORTHO05D008449 3.1e-59 232.6 255 52.2
Medtr5g022860 Medicago truncatula HOM05D006745 ORTHO05D008449 4.0e-59 232.3 251 53.0
TWI73G1304 Tripterygium wilfordii HOM05D006745 ORTHO05D008449 5.2e-59 231.9 247 53.0
Ciclev10026368m.g Citrus clementina HOM05D006745 ORTHO05D008449 6.8e-59 231.5 253 51.0
Phvul.002G105300 Phaseolus vulgaris HOM05D006745 ORTHO05D008449 6.8e-59 231.5 239 52.7
Actinidia28725 Actinidia chinensis HOM05D006745 ORTHO05D008449 8.9e-59 231.1 252 52.0
Gohir.A11G041100 Gossypium hirsutum HOM05D006745 ORTHO05D008449 8.9e-59 231.1 246 52.0
Lj2g0007566 Lotus japonicus HOM05D006745 ORTHO05D008449 8.9e-59 231.1 234 54.3
Potri.005G109000 Populus trichocarpa HOM05D006745 ORTHO05D008449 1.2e-58 230.7 254 51.6
Gohir.D11G044400 Gossypium hirsutum HOM05D006745 ORTHO05D008449 1.5e-58 230.3 246 51.6
Gorai.007G047700 Gossypium raimondii HOM05D006745 ORTHO05D008449 1.5e-58 230.3 246 51.6
Manes.01G150100 Manihot esculenta HOM05D006745 ORTHO05D008449 1.5e-58 230.3 250 51.6
HanXRQChr16g0531741 Helianthus annuus HOM05D006745 ORTHO05D008449 2.6e-58 229.6 254 52.0
AL2G11270 Arabidopsis lyrata HOM05D006745 ORTHO05D008449 5.8e-58 228.4 244 52.9
Psat2g152400 Pisum sativum HOM05D006745 ORTHO05D008449 5.8e-58 228.4 254 51.2
arahy.Tifrunner.gnm1.ann1.DU2BQF Arachis hypogaea HOM05D006745 ORTHO05D008449 7.5e-58 228.0 240 52.5
arahy.Tifrunner.gnm1.ann1.EE1FTG Arachis hypogaea HOM05D006745 ORTHO05D008449 7.5e-58 228.0 240 52.5
TPR.G25110 Trifolium pratense HOM05D006745 ORTHO05D008449 7.5e-58 228.0 254 51.6
Eucgr.I02315 Eucalyptus grandis HOM05D006745 ORTHO05D008449 9.8e-58 227.6 245 52.2
vmacro18434 Vaccinium macrocarpon HOM05D006745 ORTHO05D008449 1.3e-57 227.3 251 51.0
Ca_24936_v3 Cicer arietinum L. HOM05D006745 ORTHO05D008449 1.7e-57 226.9 254 52.0
Aa31LG2G1020 Aethionema arabicum HOM05D006745 ORTHO05D008449 2.9e-57 226.1 244 52.5
Rhsim08G0031100 Rhododendron simsii HOM05D006745 ORTHO05D008449 2.9e-57 226.1 218 57.3
RcHm_v2.0_Chr2g0098641 Rosa chinensis HOM05D006745 ORTHO05D008449 3.7e-57 225.7 255 51.4
PGR119G0426 Punica granatum HOM05D006745 ORTHO05D008449 6.4e-57 224.9 256 50.8
Glyma.01G163200 Glycine max HOM05D006745 ORTHO05D008449 1.1e-56 224.2 239 52.7
Carub.0002s0099 Capsella rubella HOM05D006745 ORTHO05D008449 1.9e-56 223.4 244 52.0
Sabra05G0089300 Salix brachista HOM05D006745 ORTHO05D008449 2.4e-56 223.0 218 55.5
THA.LOC104817830 Tarenaya hassleriana HOM05D006745 ORTHO05D008449 2.4e-56 223.0 252 51.2
Oeu058205.1 Olea europaea HOM05D006745 ORTHO05D008449 3.2e-56 222.6 252 52.0
Oeu058207.1 Olea europaea HOM05D006745 ORTHO05D008449 3.2e-56 222.6 252 52.0
BcaC04g22675 Brassica carinata HOM05D006745 ORTHO05D008449 4.1e-56 222.2 249 51.8
VMungo1215G1582 Vigna mungo HOM05D006745 ORTHO05D008449 5.4e-56 221.9 237 51.5
Sc22g0002270 Simmondsia chinensis HOM05D006745 ORTHO05D008449 7.0e-56 221.5 256 48.4
Lsat_1_v5_gn_3_71521 Lactuca sativa HOM05D006745 ORTHO05D008449 1.2e-55 220.7 238 50.8
Nn6g31942 Nelumbo nucifera HOM05D006745 ORTHO05D008449 2.0e-55 219.9 241 50.6
Lalb_Chr09g0321491 Lupinus albus HOM05D006745 ORTHO05D008449 4.6e-55 218.8 245 50.2
MD15G1238900 Malus domestica HOM05D006745 ORTHO05D008449 4.6e-55 218.8 249 48.6
CSS0026839 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 7.8e-55 218.0 246 50.4
AUR62003702 Chenopodium quinoa HOM05D006745 ORTHO05D008449 1.7e-54 216.9 260 49.6
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 3.0e-54 216.1 241 50.2
EL10Ac6g15168 Beta vulgaris HOM05D006745 ORTHO05D008449 3.9e-54 215.7 237 51.5
CSS0046970 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 3.9e-54 215.7 246 50.0
FAN19G0356 Fragaria x ananassa HOM05D006745 ORTHO05D008449 6.6e-54 214.9 250 48.4
Cc07_g11200 Coffea canephora HOM05D006745 ORTHO05D008449 8.6e-54 214.5 219 54.3
Solyc02g061950.4 Solanum lycopersicum HOM05D006745 ORTHO05D008449 1.5e-53 213.8 258 50.8
CAN.G576.2 Capsicum annuum HOM05D006745 ORTHO05D008449 1.9e-53 213.4 218 55.0
FAN23G2677 Fragaria x ananassa HOM05D006745 ORTHO05D008449 4.3e-53 212.2 250 48.0
DCAR_023133 Daucus carota HOM05D006745 ORTHO05D008449 7.3e-53 211.5 244 50.0
PGSC0003DMG401023885 Solanum tuberosum HOM05D006745 ORTHO05D008449 7.3e-53 211.5 261 49.4
FAN26G1827 Fragaria x ananassa HOM05D006745 ORTHO05D008449 9.5e-53 211.1 243 49.0
Sopen02g012910 Solanum pennellii HOM05D006745 ORTHO05D008449 9.5e-53 211.1 258 50.0
SGA_v2.0_scaffold77G25309 Striga asiatica HOM05D006745 ORTHO05D008449 2.1e-52 209.9 238 51.3
Thecc.01G012900 Theobroma cacao HOM05D006745 ORTHO05D008449 4.7e-52 208.8 260 48.5
ECA246G0119 Erigeron canadensis HOM05D006745 ORTHO05D008449 6.2e-52 208.4 250 46.4
Os02g0120300 Oryza sativa ssp. japonica HOM05D006745 ORTHO05D008449 3.1e-51 206.1 258 46.5
Migut.N00678 Erythranthe guttata HOM05D006745 ORTHO05D008449 4.0e-51 205.7 245 48.6
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 1.2e-50 204.1 218 50.0
Zm00001eb229980 Zea mays HOM05D006745 ORTHO05D008449 2.6e-50 203.0 234 48.7
AUR62018011 Chenopodium quinoa HOM05D006745 ORTHO05D008449 3.4e-50 202.6 208 56.2
Duzib147G0156 Durio zibethinus HOM05D006745 ORTHO05D008449 7.5e-50 201.4 252 48.8
Prupe.7G173600 Prunus persica HOM05D006745 ORTHO05D008449 1.3e-49 200.7 248 47.6
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 1.1e-48 197.6 243 45.7
Aqoxy6G02103 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 2.4e-48 196.4 222 47.3
Nitab4.5_0000188g0160 Nicotiana tabacum HOM05D006745 ORTHO05D008449 4.1e-48 195.7 288 44.4
CiPaw.07G062000 Carya illinoinensis HOM05D006745 ORTHO05D008449 9.2e-48 194.5 255 47.1
CARHR047310 Cardamine hirsuta HOM05D006745 ORTHO05D008449 1.2e-47 194.1 181 58.6
Ah.02g123330 Amaranthus hybridus HOM05D006745 ORTHO05D008449 2.1e-47 193.4 249 47.0
ATR0661G256 Amborella trichopoda HOM05D006745 ORTHO05D008449 6.0e-47 191.8 222 45.0
HPP92_012950 Vanilla planifolia HOM05D006745 ORTHO05D008449 6.0e-47 191.8 238 45.0
CDE05G1799 Ceratophyllum demersum HOM05D006745 ORTHO05D008449 2.5e-45 186.4 186 52.2
unitig_60.g25574 Utricularia gibba HOM05D006745 ORTHO05D008449 5.6e-45 185.3 282 42.9
Aqoxy278s001 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 2.9e-41 172.9 208 47.6
AT1G63855 Arabidopsis thaliana HOM05D006745 ORTHO05D008449 2.9e-41 172.9 252 43.3
Thhalv10023706m.g Eutrema salsugineum HOM05D006745 ORTHO05D008449 3.7e-41 172.6 247 41.7
CARHR047280 Cardamine hirsuta HOM05D006745 ORTHO05D008449 1.1e-40 171.0 159 56.6
Sp2g00830 Schrenkiella parvula HOM05D006745 ORTHO05D008449 3.2e-40 169.5 248 41.1
Atru.chr3.895 Acer truncatum HOM05D006745 ORTHO05D008449 4.1e-40 169.1 256 41.4
FvH4_1g11230 Fragaria vesca HOM05D006745 ORTHO05D008449 2.7e-39 166.4 169 52.1
Atru.chr3.884 Acer truncatum HOM05D006745 ORTHO05D008449 6.6e-38 161.8 219 43.4
arahy.Tifrunner.gnm1.ann1.N8WRPV Arachis hypogaea HOM05D006745 ORTHO05D008449 1.1e-37 161.0 158 54.4
Peaxi162Scf00439g00049 Petunia axillaris HOM05D006745 ORTHO05D008449 9.5e-37 157.9 303 39.3
SalBow3G1250 Salvia bowleyana HOM05D006745 ORTHO05D008449 3.1e-35 152.9 237 42.2
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 5.8e-34 148.7 239 38.1
SMO340G0117 Selaginella moellendorffii HOM05D006745 ORTHO05D008449 2.9e-33 146.4 237 38.0
Nitab4.5_0002337g0130 Nicotiana tabacum HOM05D006745 ORTHO05D008449 1.4e-32 144.1 209 44.5
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 1.2e-31 141.0 237 37.1
CSS0012608 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 6.0e-31 138.7 223 42.2
Medtr3g096562 Medicago truncatula HOM05D006745 ORTHO05D008449 7.8e-31 138.3 142 53.5
Medtr3g096570 Medicago truncatula HOM05D006745 ORTHO05D008449 1.7e-30 137.1 139 54.0
Glyma.02G164500 Glycine max HOM05D006745 ORTHO05D008449 3.6e-28 129.4 208 38.0
Pp3c3_3178 Physcomitrium patens HOM05D006745 ORTHO05D008449 5.3e-27 125.6 239 35.6
FAN28G2493 Fragaria x ananassa HOM05D006745 ORTHO05D008449 9.0e-27 124.8 267 33.3
Cpa.g.sc29.52 Carica papaya HOM05D006745 ORTHO05D008449 9.9e-26 121.3 141 48.2
Hund14069 Selenicereus undatus HOM05D006745 ORTHO05D008449 9.3e-24 114.8 115 56.5
BraA09t37044Z Brassica rapa HOM05D006745 ORTHO05D008449 4.2e-16 89.4 107 49.5
Rhsim01G0268300 Rhododendron simsii HOM05D006745 ORTHO05D008449 9.3e-16 88.2 89 52.8
MSTRG.17961 Avicennia marina HOM05D006745 ORTHO05D008449 1.6e-15 87.4 92 53.3
Medtr2g078490 Medicago truncatula HOM05D006745 ORTHO05D008449 7.9e-15 85.1 138 39.9
COL.COLO4_22483 Corchorus olitorius HOM05D006745 ORTHO05D008449 1.1e-11 74.7 54 66.7
BolC4t24505H Brassica oleracea HOM05D006745 ORTHO05D008449 1.2e-10 71.2 66 62.1
SEGI_40099 Sequoiadendron giganteum HOM05D006745 ORTHO05D008449 3.0e-06 56.6 57 52.6


User provided reference genes

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