Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 2.2e-60 236.1 187 100.0
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 2.9e-20 102.8 66 84.8
ClCG02G020690 Citrullus lanatus HOM05D021867 ORTHO05D008438 1.9e-19 100.1 81 70.4
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 7.8e-18 94.7 71 73.2
CsaV3_6G021930 Cucumis sativus L. HOM05D021867 ORTHO05D008438 1.0e-17 94.4 71 73.2
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 3.1e-14 82.8 65 70.8
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 2.0e-13 80.1 65 64.6
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 1.3e-12 77.4 67 62.7
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 1.3e-12 77.4 65 64.6
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 1.7e-12 77.0 65 66.2
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 2.9e-12 76.3 75 61.3
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 3.7e-12 75.9 65 63.1
Sed0014169 Sechium edule HOM05D007431 ORTHO05D008438 3.7e-12 75.9 72 63.9
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 4.9e-12 75.5 81 55.6
Glyma.14G094600 Glycine max HOM05D007431 ORTHO05D008438 1.1e-11 74.3 75 60.0
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 1.9e-11 73.6 65 63.1
THA.LOC104799471 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 2.4e-11 73.2 61 60.7
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 3.2e-11 72.8 78 52.6
Cfa011407 Carpinus fangiana HOM05D023024 ORTHO05D008438 3.2e-11 72.8 63 65.1
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 3.2e-11 72.8 84 54.8
CiPaw.14G074700 Carya illinoinensis HOM05D023024 ORTHO05D008438 4.1e-11 72.4 81 55.6
Ca_13166_v3 Cicer arietinum L. HOM05D007431 ORTHO05D008438 4.1e-11 72.4 65 64.6
COL.COLO4_18404 Corchorus olitorius HOM05D007431 ORTHO05D008438 4.1e-11 72.4 66 65.2
AUR62034380 Chenopodium quinoa HOM05D007431 ORTHO05D008438 5.4e-11 72.0 73 57.5
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 5.4e-11 72.0 79 53.2
Ciclev10028956m.g Citrus clementina HOM05D007431 ORTHO05D008438 7.1e-11 71.6 65 58.5
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 9.2e-11 71.2 65 61.5
RhsimUnG0043300 Rhododendron simsii HOM05D002794 ORTHO05D008438 9.2e-11 71.2 78 52.6
Haze_02139 Corylus avellana HOM05D023024 ORTHO05D008438 1.2e-10 70.9 65 61.5
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 1.2e-10 70.9 84 51.2
Haze_23978 Corylus avellana HOM05D023024 ORTHO05D008438 1.6e-10 70.5 65 61.5
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 1.6e-10 70.5 65 60.0
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 1.6e-10 70.5 79 51.9
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 1.6e-10 70.5 79 51.9
Prupe.6G089500 Prunus persica HOM05D016629 ORTHO05D008438 2.1e-10 70.1 63 61.9
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 2.7e-10 69.7 65 60.0
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 3.5e-10 69.3 58 63.8
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 3.5e-10 69.3 58 65.5
AUR62022321 Chenopodium quinoa HOM05D007431 ORTHO05D008438 4.6e-10 68.9 69 58.0
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 4.6e-10 68.9 79 50.6
TPR.G26566 Trifolium pratense HOM05D007431 ORTHO05D008438 7.8e-10 68.2 72 55.6
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 1.0e-09 67.8 60 58.3
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 1.0e-09 67.8 63 57.1
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 2.3e-09 66.6 61 60.7
Hma1.2p1_0321F.1_g124110 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 2.3e-09 66.6 73 56.2
MD03G1106700 Malus domestica HOM05D016629 ORTHO05D008438 2.3e-09 66.6 56 66.1
Phvul.001G035400 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 2.3e-09 66.6 65 56.9
THA.LOC104814853 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 2.3e-09 66.6 61 57.4
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 3.0e-09 66.2 63 55.6
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 3.0e-09 66.2 65 60.0
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 3.9e-09 65.9 61 55.7
Actinidia00802 Actinidia chinensis HOM05D007431 ORTHO05D008438 5.1e-09 65.5 65 56.9
Hma1.2p1_0321F.1_g124100 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 5.1e-09 65.5 73 54.8
Ah.15g096430 Amaranthus hybridus HOM05D007431 ORTHO05D008438 6.6e-09 65.1 73 54.8
VMungo0647G2370 Vigna mungo HOM05D007431 ORTHO05D008438 6.6e-09 65.1 65 55.4
BolC3t13774H Brassica oleracea HOM05D007431 ORTHO05D008438 8.6e-09 64.7 72 50.0
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 1.1e-08 64.3 63 52.4
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 1.1e-08 64.3 79 48.1
Phvul.001G035300 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 1.1e-08 64.3 63 57.1
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 1.5e-08 63.9 60 55.0
Psat6g020440 Pisum sativum HOM05D007431 ORTHO05D008438 1.5e-08 63.9 65 56.9
BcaB05g22609 Brassica carinata HOM05D007431 ORTHO05D008438 1.9e-08 63.5 61 55.7
A02p06640 Brassica napus HOM05D007431 ORTHO05D008438 1.9e-08 63.5 70 50.0
C02p11930 Brassica napus HOM05D007431 ORTHO05D008438 1.9e-08 63.5 70 50.0
BolC2t07290H Brassica oleracea HOM05D007431 ORTHO05D008438 1.9e-08 63.5 63 52.4
BraA02t05746Z Brassica rapa HOM05D007431 ORTHO05D008438 1.9e-08 63.5 70 50.0
MBI15_g23248_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 2.5e-08 63.2 65 60.0
QL01p035383 Quercus lobata HOM05D007431 ORTHO05D008438 2.5e-08 63.2 65 53.8
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 3.3e-08 62.8 65 55.4
Eucgr.B01149 Eucalyptus grandis HOM05D007431 ORTHO05D008438 3.3e-08 62.8 65 52.3
A03p11360 Brassica napus HOM05D007431 ORTHO05D008438 4.3e-08 62.4 72 47.2
DCAR_011227 Daucus carota HOM05D007431 ORTHO05D008438 4.3e-08 62.4 63 57.1
DCAR_011228 Daucus carota HOM05D007431 ORTHO05D008438 4.3e-08 62.4 63 57.1
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 4.3e-08 62.4 62 54.8
MBI18_g47623_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 4.3e-08 62.4 65 60.0
Potri.019G095600 Populus trichocarpa HOM05D007431 ORTHO05D008438 4.3e-08 62.4 65 53.8
Sp6g21690 Schrenkiella parvula HOM05D007431 ORTHO05D008438 4.3e-08 62.4 62 50.0
Lj5g0005730 Lotus japonicus HOM05D007431 ORTHO05D008438 5.6e-08 62.0 71 50.7
MBI11_g07544_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 5.6e-08 62.0 65 58.5
BraA03t10450Z Brassica rapa HOM05D007431 ORTHO05D008438 1.2e-07 60.8 71 47.9
ECA238G2926 Erigeron canadensis HOM05D007431 ORTHO05D008438 1.2e-07 60.8 66 56.1
TWI53G0129 Tripterygium wilfordii HOM05D007431 ORTHO05D008438 1.6e-07 60.5 67 59.7
C03p13110 Brassica napus HOM05D007431 ORTHO05D008438 2.1e-07 60.1 71 47.9
CARHR068680 Cardamine hirsuta HOM05D007431 ORTHO05D008438 2.1e-07 60.1 83 41.0
PSO339G3784 Papaver somniferum HOM05D007431 ORTHO05D008438 2.1e-07 60.1 65 52.3
PSO384G2622 Papaver somniferum HOM05D007431 ORTHO05D008438 2.1e-07 60.1 65 52.3
Aqoxy4G03128 Aquilegia oxysepala HOM05D007431 ORTHO05D008438 2.8e-07 59.7 59 59.3
MBI15_g23251_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 2.8e-07 59.7 65 58.5
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 3.6e-07 59.3 65 53.8
Dinv32831 Davidia involucrata HOM05D001089 ORTHO05D008438 6.2e-07 58.5 61 57.4
MBI15_g23247_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 8.1e-07 58.2 80 51.2
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 1.1e-06 57.8 56 55.4
Nn2g10588 Nelumbo nucifera HOM05D007431 ORTHO05D008438 1.1e-06 57.8 62 51.6
Lsat_1_v5_gn_8_91980 Lactuca sativa HOM05D007431 ORTHO05D008438 1.4e-06 57.4 56 55.4
Potri.013G126701 Populus trichocarpa HOM05D007431 ORTHO05D008438 1.4e-06 57.4 65 49.2
Sabra13G0105800 Salix brachista HOM05D007431 ORTHO05D008438 1.4e-06 57.4 65 49.2
Sabra19G0107900 Salix brachista HOM05D007431 ORTHO05D008438 1.8e-06 57.0 95 40.0
Manes.07G083300 Manihot esculenta HOM05D007431 ORTHO05D008438 2.4e-06 56.6 55 56.4
CDE02G3020 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 3.1e-06 56.2 62 51.6
CDE01G0792 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 4.0e-06 55.8 70 47.1
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 5.2e-06 55.5 65 44.6


User provided reference genes

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