Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 5.8e-33 143.7 74 100.0
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 2.1e-27 125.2 74 86.5
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 1.1e-26 122.9 74 85.1
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 2.4e-26 121.7 74 83.8
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 2.0e-25 118.6 65 92.3
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 4.4e-25 117.5 73 83.6
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 5.8e-25 117.1 70 85.7
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 1.3e-24 115.9 67 88.1
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 2.2e-24 115.2 65 87.7
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 2.2e-24 115.2 65 87.7
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 2.2e-24 115.2 70 82.9
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 2.2e-24 115.2 70 82.9
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 3.8e-24 114.4 70 82.9
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 6.4e-24 113.6 70 84.3
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 8.4e-24 113.2 70 82.9
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 8.4e-24 113.2 70 81.4
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 1.1e-23 112.8 70 82.9
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 1.4e-23 112.5 70 81.4
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 1.4e-23 112.5 70 81.4
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 1.9e-23 112.1 70 80.0
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 2.4e-23 111.7 70 80.0
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 3.2e-23 111.3 74 81.1
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 3.2e-23 111.3 74 78.4
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 3.2e-23 111.3 68 83.8
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 4.2e-23 110.9 74 79.7
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 4.2e-23 110.9 70 81.4
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 5.4e-23 110.5 70 80.0
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 5.4e-23 110.5 67 85.1
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 5.4e-23 110.5 74 77.0
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 5.4e-23 110.5 66 83.3
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 5.4e-23 110.5 74 79.7
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 7.1e-23 110.2 66 86.4
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 7.1e-23 110.2 67 85.1
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 7.1e-23 110.2 67 85.1
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 7.1e-23 110.2 70 78.6
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 7.1e-23 110.2 67 85.1
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 9.3e-23 109.8 70 78.6
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 1.6e-22 109.0 64 84.4
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 1.6e-22 109.0 67 82.1
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 2.1e-22 108.6 67 83.6
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 2.1e-22 108.6 67 83.6
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 3.5e-22 107.8 70 77.1
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 3.5e-22 107.8 69 79.7
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 6.0e-22 107.1 65 81.5
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 6.0e-22 107.1 74 81.1
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 6.0e-22 107.1 73 76.7
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 7.8e-22 106.7 70 75.7
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 7.8e-22 106.7 70 75.7
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 7.8e-22 106.7 70 75.7
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 1.3e-21 105.9 70 77.1
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 1.7e-21 105.5 70 75.7
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 6.6e-21 103.6 70 75.7
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 1.1e-20 102.8 62 82.3
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 1.9e-20 102.1 70 75.7
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 2.8e-19 98.2 70 74.3
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.8e-18 95.5 69 75.4
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 1.8e-18 95.5 74 64.9
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 4.0e-18 94.4 69 72.5
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 5.3e-18 94.0 58 82.8
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 6.9e-18 93.6 75 69.3
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 9.0e-18 93.2 57 78.9
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 1.2e-17 92.8 58 75.9
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 2.6e-17 91.7 57 75.4
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 7.6e-17 90.1 58 79.3
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 9.9e-17 89.7 65 73.8
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 1.7e-16 89.0 51 86.3
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 2.9e-16 88.2 55 78.2
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 3.8e-16 87.8 54 75.9
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 4.9e-16 87.4 49 83.7
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 6.4e-16 87.0 58 75.9
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 2.4e-15 85.1 54 72.2
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 4.2e-15 84.3 58 74.1
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 7.1e-15 83.6 54 77.8
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 7.1e-15 83.6 54 77.8
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 2.1e-14 82.0 54 74.1
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 2.1e-14 82.0 54 74.1
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 2.1e-14 82.0 71 60.6
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 6.2e-11 70.5 41 87.8
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 1.1e-10 69.7 51 66.7
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 1.4e-10 69.3 48 75.0
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 3.1e-10 68.2 45 77.8
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 6.9e-10 67.0 73 50.7
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 2.2e-08 62.0 33 84.8
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 8.4e-08 60.1 33 87.9


User provided reference genes

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