Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 1.7e-140 502.7 256 100.0
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 7.4e-112 407.5 259 82.6
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 4.8e-111 404.8 259 82.6
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 8.3e-95 350.9 273 71.8
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 3.5e-93 345.5 265 71.7
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 3.5e-93 345.5 264 71.2
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 5.9e-93 344.7 278 69.8
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.9e-91 339.7 278 68.7
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 4.2e-91 338.6 269 69.9
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 4.2e-91 338.6 206 85.0
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 8.0e-90 334.3 264 69.3
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 1.0e-89 334.0 275 66.9
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 1.4e-89 333.6 279 68.5
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 3.0e-89 332.4 206 83.5
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 5.2e-89 331.6 274 68.2
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 6.8e-89 331.3 278 67.6
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 1.2e-88 330.5 198 83.8
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 1.5e-88 330.1 274 66.8
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 2.0e-88 329.7 210 80.5
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 2.0e-88 329.7 237 74.7
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 2.0e-88 329.7 215 79.1
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 3.4e-88 328.9 261 68.6
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 3.4e-88 328.9 264 70.5
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 4.4e-88 328.6 275 67.3
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 4.4e-88 328.6 274 66.4
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 4.4e-88 328.6 210 81.0
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 7.5e-88 327.8 272 68.0
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 7.5e-88 327.8 188 87.8
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 9.8e-88 327.4 198 82.8
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 9.8e-88 327.4 216 77.3
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 9.8e-88 327.4 278 67.3
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 1.3e-87 327.0 264 67.8
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 2.2e-87 326.2 218 77.1
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 2.8e-87 325.9 267 69.7
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 3.7e-87 325.5 265 67.5
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 3.7e-87 325.5 270 67.4
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 4.9e-87 325.1 200 81.0
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 4.9e-87 325.1 275 66.5
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 1.4e-86 323.6 196 81.6
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 3.1e-86 322.4 194 83.5
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 5.4e-86 321.6 264 65.9
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 7.0e-86 321.2 216 75.5
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 9.2e-86 320.9 203 80.3
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.2e-85 320.5 266 66.2
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.6e-85 320.1 212 76.9
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 1.6e-85 320.1 252 71.8
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 2.0e-85 319.7 190 85.8
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 2.7e-85 319.3 207 78.3
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 3.5e-85 318.9 233 72.5
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 3.5e-85 318.9 269 67.7
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 3.5e-85 318.9 262 67.9
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 4.5e-85 318.5 237 71.7
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.5e-85 318.5 212 76.4
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 7.8e-85 317.8 203 77.8
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 7.8e-85 317.8 263 66.9
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 7.8e-85 317.8 209 78.9
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 1.3e-84 317.0 272 65.4
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.3e-84 317.0 233 72.5
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 2.3e-84 316.2 232 72.4
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 2.3e-84 316.2 233 71.7
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 2.3e-84 316.2 233 71.7
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 2.3e-84 316.2 196 82.7
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 3.8e-84 315.5 201 77.6
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 6.6e-84 314.7 195 82.1
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 8.6e-84 314.3 197 81.7
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 8.6e-84 314.3 222 73.9
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 1.1e-83 313.9 197 80.2
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 1.9e-83 313.2 208 76.9
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 1.9e-83 313.2 196 81.6
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 3.3e-83 312.4 189 83.6
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 4.3e-83 312.0 233 72.5
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 4.3e-83 312.0 251 69.7
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 7.3e-83 311.2 191 83.2
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 9.5e-83 310.8 232 73.3
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.1e-82 309.7 225 72.9
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 4.7e-82 308.5 205 76.6
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 6.1e-82 308.1 278 61.9
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 8.0e-82 307.8 264 65.9
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 1.0e-81 307.4 290 62.4
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.4e-81 307.0 273 63.4
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 1.4e-81 307.0 187 80.7
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 1.8e-81 306.6 197 80.7
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 2.3e-81 306.2 232 71.1
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 2.3e-81 306.2 198 78.3
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 4.0e-81 305.4 259 64.9
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 5.2e-81 305.1 238 71.0
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 1.2e-80 303.9 201 79.1
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 1.5e-80 303.5 212 75.0
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 1.5e-80 303.5 232 71.6
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 4.4e-80 302.0 195 80.5
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 9.8e-80 300.8 268 66.0
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 2.9e-79 299.3 232 70.3
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 4.9e-79 298.5 232 70.3
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 8.3e-79 297.7 270 64.1
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 1.1e-78 297.4 191 77.5
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 3.2e-78 295.8 250 64.8
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 4.1e-78 295.4 221 69.7
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.6e-77 293.5 257 62.3
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 3.3e-75 285.8 197 78.2
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 5.6e-75 285.0 257 64.6
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 2.6e-72 276.2 195 69.2
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 3.5e-69 265.8 274 57.3
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.3e-68 263.1 209 69.4
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 9.5e-67 257.7 188 66.5
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 6.2e-66 255.0 197 70.6
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 2.3e-65 253.1 195 65.6
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 9.2e-62 241.1 218 58.3
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 3.4e-56 222.6 150 77.3
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 4.9e-55 218.8 272 52.9
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.1e-51 207.6 194 60.3
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 2.2e-47 193.4 203 50.7
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 2.2e-47 193.4 206 55.3
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 4.2e-46 189.1 109 81.7
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 9.3e-46 188.0 185 51.9
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 2.1e-45 186.8 134 72.4
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 5.3e-41 172.2 109 74.3
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 2.5e-35 153.3 188 43.6
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.5e-29 132.9 103 68.9
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.0e-23 114.8 108 59.3
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 2.4e-17 93.6 72 69.4
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 1.9e-14 84.0 48 83.3
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 1.6e-13 80.9 94 55.3
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 9.1e-09 65.1 44 70.5
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 1.0e-07 61.6 44 61.4
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 3.8e-07 59.7 66 54.5


User provided reference genes

Program Settings