Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 8.5e-225 783.5 436 100.0
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 9.6e-144 514.2 440 65.2
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 6.0e-138 495.0 362 72.1
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 1.1e-110 404.4 411 57.7
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 1.6e-98 364.0 410 53.9
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 5.7e-96 355.5 411 51.3
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 3.7e-95 352.8 410 50.0
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 3.4e-88 329.7 411 48.4
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 7.0e-86 322.0 352 53.7
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 2.9e-84 316.6 401 47.1
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 6.6e-84 315.5 422 44.3
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 1.5e-83 314.3 353 51.8
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 1.9e-83 313.9 356 52.5
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 7.2e-83 312.0 415 46.7
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 9.5e-83 311.6 424 46.5
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 4.7e-82 309.3 356 52.0
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 8.0e-82 308.5 407 47.7
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.0e-81 308.1 363 51.5
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.3e-81 307.0 360 51.7
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.0e-81 306.2 360 51.7
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.2e-81 305.8 356 52.0
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 7.5e-80 302.0 327 52.6
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 9.8e-80 301.6 415 46.3
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.3e-79 301.2 341 51.3
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 6.3e-79 298.9 341 51.3
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 8.3e-79 298.5 340 50.6
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 8.3e-79 298.5 413 45.5
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 3.2e-78 296.6 413 46.0
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 9.2e-78 295.0 362 50.6
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 3.3e-75 286.6 473 41.4
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 1.5e-72 277.7 398 45.7
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 1.9e-70 270.8 411 43.1
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 7.0e-70 268.9 394 44.7
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 6.0e-69 265.8 411 42.3
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 6.0e-69 265.8 429 41.7
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 1.7e-68 264.2 333 47.7
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 2.3e-68 263.8 346 45.4
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 6.6e-68 262.3 387 44.7
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 8.6e-68 261.9 398 43.0
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 2.5e-67 260.4 451 39.5
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 4.3e-67 259.6 331 48.6
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 9.5e-67 258.5 476 38.2
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 2.1e-66 257.3 338 47.0
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 2.8e-66 256.9 360 44.2
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 2.8e-66 256.9 380 43.9
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 2.3e-65 253.8 396 48.2
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 9.8e-64 248.4 332 47.0
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 4.9e-63 246.1 451 37.3
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 1.1e-62 245.0 326 46.3
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 3.2e-62 243.4 346 42.8
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 5.4e-62 242.7 404 40.1
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 3.0e-60 236.9 340 44.7
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 3.0e-60 236.9 353 43.1
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 3.9e-60 236.5 334 46.1
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 1.9e-59 234.2 338 44.7
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 3.3e-59 233.4 348 44.3
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 5.6e-59 232.6 403 40.4
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 9.5e-59 231.9 332 45.2
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 9.5e-59 231.9 326 45.4
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 2.1e-58 230.7 408 40.2
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 1.1e-57 228.4 380 41.3
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 2.3e-57 227.3 371 42.9
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 2.2e-55 220.7 372 41.1
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 3.7e-55 219.9 326 43.9
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 4.9e-55 219.5 360 43.3
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 1.1e-54 218.4 384 39.3
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 2.4e-54 217.2 333 43.5
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 4.1e-54 216.5 387 38.8
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 5.4e-54 216.1 363 41.6
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 1.2e-53 214.9 326 42.6
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 1.0e-52 211.8 354 41.8
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 1.3e-52 211.5 392 39.0
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 1.3e-52 211.5 391 38.9
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 1.3e-52 211.5 378 40.7
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 3.0e-52 210.3 387 39.0
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 1.5e-51 208.0 392 38.5
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 5.6e-51 206.1 433 36.5
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 9.6e-51 205.3 454 36.1
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 1.6e-50 204.5 454 36.1
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 2.1e-50 204.1 356 41.6
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 4.7e-50 203.0 416 37.5
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 4.0e-49 199.9 406 38.9
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 5.2e-49 199.5 439 35.8
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 5.2e-49 199.5 406 38.9
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 1.2e-48 198.4 331 42.6
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 1.2e-48 198.4 365 39.2
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.5e-48 198.0 202 55.9
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 4.4e-48 196.4 317 41.6
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 6.4e-47 192.6 324 42.6
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 1.1e-46 191.8 373 39.7
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 4.2e-46 189.9 324 39.8
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 4.2e-46 189.9 324 39.8
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 1.6e-45 188.0 373 39.1
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 4.6e-45 186.4 434 37.6
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 3.0e-44 183.7 323 41.5
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 6.6e-44 182.6 254 47.6
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 8.7e-44 182.2 325 40.0
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 2.5e-43 180.6 270 44.4
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 2.8e-42 177.2 321 40.5
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 2.9e-39 167.2 366 33.9
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 1.1e-38 165.2 350 36.6
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 3.2e-38 163.7 381 32.8
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 5.4e-38 162.9 334 38.0
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.3e-36 158.3 273 40.7
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 8.7e-36 155.6 355 33.0
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 3.3e-35 153.7 357 33.1
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 9.0e-33 145.6 345 33.3
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 2.7e-29 134.0 332 33.7
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 3.9e-28 130.2 334 30.5
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 5.1e-28 129.8 301 31.6
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 8.7e-28 129.0 361 31.3
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 3.3e-27 127.1 214 42.1
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 1.3e-23 115.2 274 32.1
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 1.7e-23 114.8 153 47.1
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 1.1e-17 95.5 152 42.8
Mapoly0039s0001 Marchantia polymorpha HOM05D005720 ORTHO05D006984 2.3e-12 77.8 197 29.9
MBI16_g03132_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 2.8e-10 70.9 160 35.0
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 6.5e-07 59.7 140 35.0


User provided reference genes

Program Settings