Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 8.5e-180 633.6 339 100.0
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 7.0e-126 454.5 341 74.2
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 2.3e-121 439.5 342 73.7
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.4e-118 430.3 340 72.9
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 1.8e-65 253.8 340 51.5
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 1.9e-62 243.8 341 49.0
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 2.7e-61 240.0 341 48.4
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 8.8e-60 235.0 343 49.6
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 1.3e-58 231.1 340 46.5
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 8.2e-58 228.4 347 48.4
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 5.9e-56 222.2 341 46.3
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 1.0e-55 221.5 341 45.2
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 1.7e-55 220.7 342 44.2
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 1.4e-54 217.6 344 47.1
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 4.7e-53 212.6 344 43.9
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 7.9e-53 211.8 343 43.7
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 3.3e-51 206.5 348 46.0
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 7.4e-51 205.3 341 44.0
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 1.3e-50 204.5 344 43.9
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 2.2e-50 203.8 340 43.2
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 3.7e-50 203.0 345 44.3
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 8.2e-50 201.8 341 46.9
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.1e-49 201.4 351 42.5
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 1.4e-49 201.1 361 42.9
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 3.1e-49 199.9 351 42.2
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 1.2e-48 198.0 349 43.0
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 4.5e-48 196.1 346 41.0
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 5.9e-48 195.7 351 41.6
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 5.9e-48 195.7 343 45.2
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 1.3e-47 194.5 318 45.3
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.3e-47 194.5 341 44.3
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 1.7e-47 194.1 321 45.8
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.9e-47 193.4 335 43.6
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 6.5e-47 192.2 335 44.2
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 6.5e-47 192.2 335 44.2
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 6.5e-47 192.2 356 40.4
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.1e-46 191.4 335 43.0
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.0e-44 184.9 341 41.3
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 6.7e-44 182.2 352 39.8
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 8.8e-44 181.8 347 41.2
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 5.7e-43 179.1 352 40.1
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 3.7e-42 176.4 354 40.7
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 1.1e-41 174.9 352 39.2
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 3.1e-41 173.3 319 43.6
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 4.5e-40 169.5 336 41.7
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 4.5e-40 169.5 352 38.1
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.7e-40 168.7 334 42.8
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 2.9e-39 166.8 322 42.5
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 1.1e-38 164.9 377 35.8
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 1.9e-38 164.1 399 36.1
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 3.2e-38 163.3 340 40.3
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 1.2e-35 154.8 357 38.4
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 7.5e-35 152.1 337 36.8
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 1.7e-34 151.0 315 39.0
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 2.2e-34 150.6 299 39.8
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 4.8e-34 149.4 297 40.7
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 7.0e-33 145.6 354 35.0
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 2.0e-32 144.1 333 36.9
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 2.7e-32 143.7 253 43.5
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 7.7e-32 142.1 372 36.6
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 2.2e-31 140.6 348 37.6
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 5.0e-31 139.4 207 48.3
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 8.5e-31 138.7 334 34.1
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 4.2e-30 136.3 339 35.4
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 5.5e-30 136.0 251 43.0
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 5.5e-30 136.0 333 36.3
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 7.2e-30 135.6 334 34.1
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 8.0e-29 132.1 351 35.9
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.4e-28 131.3 334 36.2
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 1.8e-28 131.0 346 35.8
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 4.0e-28 129.8 238 39.1
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 5.2e-28 129.4 333 33.9
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 6.8e-28 129.0 293 42.0
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 1.2e-27 128.3 303 36.6
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 4.4e-27 126.3 299 36.5
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 1.3e-26 124.8 333 35.4
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 2.2e-26 124.0 340 36.5
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 1.1e-25 121.7 342 36.5
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 3.1e-25 120.2 212 42.9
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.2e-24 118.2 334 35.0
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 2.7e-24 117.1 227 37.4
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 1.0e-23 115.2 334 32.9
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 2.9e-23 113.6 350 34.6
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 2.9e-23 113.6 336 31.8
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 3.8e-23 113.2 238 37.4
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 8.6e-23 112.1 340 34.1
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 8.6e-23 112.1 308 33.1
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 1.2e-21 108.2 357 36.1
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 2.1e-21 107.5 351 34.2
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 2.8e-21 107.1 258 36.0
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 8.0e-21 105.5 156 47.4
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 1.8e-20 104.4 339 35.4
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 2.3e-20 104.0 342 36.3
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 3.0e-20 103.6 299 33.4
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 6.8e-20 102.4 195 38.5
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 8.9e-20 102.1 257 35.0
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.5e-19 101.3 177 42.4
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 3.4e-19 100.1 343 37.0
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 1.3e-18 98.2 341 34.9
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 3.2e-17 93.6 203 36.5
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 4.1e-17 93.2 206 37.4
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 9.2e-17 92.0 340 32.4
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 1.0e-15 88.6 341 35.5
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 1.3e-15 88.2 340 34.1
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 1.7e-15 87.8 340 34.4
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 2.9e-15 87.0 353 30.0
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 3.9e-15 86.7 245 35.5
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 5.0e-15 86.3 341 34.0
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 1.5e-14 84.7 209 35.4
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 2.3e-12 77.4 299 31.1
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 3.1e-12 77.0 163 33.7
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 2.0e-11 74.3 300 31.3
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 2.0e-11 74.3 157 40.8
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 8.3e-10 68.9 191 35.6
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 5.4e-09 66.2 262 32.8
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 7.8e-08 62.4 249 33.7
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 2.3e-07 60.8 229 33.2
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 3.0e-07 60.5 262 28.6
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 5.0e-07 59.7 339 31.6
C01p44480 Brassica napus HOM05D006273 ORTHO05D007607 5.0e-07 59.7 48 68.8


User provided reference genes

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