Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 0.0e+00 1315.4 652 100.0
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 1.1e-239 833.6 605 71.2
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 2.6e-238 828.9 587 73.1
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 8.7e-157 558.1 578 55.0
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 7.9e-142 508.4 670 46.7
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 2.7e-134 483.4 733 43.9
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 2.5e-132 476.9 557 49.6
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 1.1e-130 471.5 586 47.1
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 5.9e-129 465.7 569 47.3
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 2.9e-128 463.4 574 47.0
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 8.5e-128 461.8 528 49.8
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 4.2e-127 459.5 586 47.4
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 2.5e-124 450.3 675 42.8
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 4.8e-123 446.0 568 47.7
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 8.2e-123 445.3 603 44.8
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 1.8e-122 444.1 710 41.4
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 4.1e-122 443.0 613 45.5
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.2e-121 441.4 749 39.9
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 1.5e-121 441.0 578 44.5
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 1.5e-121 441.0 521 48.8
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 3.4e-121 439.9 543 47.0
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 7.7e-121 438.7 427 54.8
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 3.8e-120 436.4 376 60.4
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 5.0e-120 436.0 744 39.5
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 2.5e-119 433.7 393 57.8
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 2.5e-119 433.7 402 57.2
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 4.2e-119 433.0 402 57.2
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 5.5e-119 432.6 563 45.5
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 7.2e-119 432.2 607 43.5
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 2.1e-118 430.6 673 39.7
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 2.7e-118 430.3 396 56.8
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 7.9e-118 428.7 643 42.3
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 1.0e-117 428.3 662 39.9
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 6.7e-117 425.6 667 42.4
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 2.6e-116 423.7 430 53.5
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 2.6e-116 423.7 674 40.5
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 3.3e-116 423.3 592 43.6
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 5.7e-116 422.5 673 40.1
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 2.2e-115 420.6 392 57.4
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 2.8e-115 420.2 675 40.6
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.8e-115 420.2 683 41.1
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 6.3e-115 419.1 656 39.9
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.4e-114 417.9 360 59.7
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 3.1e-114 416.8 521 46.6
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 9.1e-114 415.2 511 48.5
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 3.5e-113 413.3 548 46.2
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 3.8e-112 409.8 363 59.8
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 5.0e-112 409.5 324 63.0
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 1.1e-111 408.3 660 40.5
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 1.8e-109 401.0 573 42.2
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 3.0e-109 400.2 399 55.1
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 8.8e-109 398.7 378 56.1
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 5.7e-108 396.0 546 43.6
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 9.7e-108 395.2 437 50.1
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 2.8e-107 393.7 553 43.6
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 4.5e-105 386.3 375 54.9
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 1.3e-104 384.8 465 47.5
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 1.7e-104 384.4 352 57.4
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 5.5e-103 379.4 450 46.4
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 2.7e-102 377.1 321 58.6
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 9.8e-100 368.6 530 44.3
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 6.3e-99 365.9 643 40.0
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 4.1e-98 363.2 690 38.0
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 1.2e-97 361.7 377 50.7
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 1.2e-97 361.7 572 41.8
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 4.5e-97 359.8 665 37.4
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 1.0e-96 358.6 378 52.9
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 3.8e-96 356.7 373 52.5
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 3.2e-95 353.6 317 57.1
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 1.2e-94 351.7 692 35.5
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 1.2e-94 351.7 291 60.5
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 2.7e-94 350.5 373 51.2
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 1.0e-93 348.6 317 57.1
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 6.8e-93 345.9 402 47.8
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 8.8e-93 345.5 402 47.8
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 5.7e-92 342.8 315 55.6
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 5.7e-92 342.8 304 58.2
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 2.8e-91 340.5 587 39.5
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 5.4e-90 336.3 315 54.3
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 5.4e-90 336.3 276 61.6
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 5.4e-90 336.3 276 61.6
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 2.9e-88 330.5 334 51.8
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 7.3e-87 325.9 335 51.9
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 4.7e-86 323.2 480 43.8
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 6.8e-85 319.3 693 34.3
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 3.7e-83 313.5 349 50.7
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.8e-82 311.2 400 44.5
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 7.8e-81 305.8 204 69.1
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 1.0e-80 305.4 209 66.5
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 2.6e-76 290.8 455 41.1
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 9.8e-76 288.9 370 44.9
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 2.2e-75 287.7 235 60.0
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 1.0e-72 278.9 259 56.8
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.4e-66 258.5 285 48.8
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 9.2e-66 255.8 319 46.4
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 2.1e-62 244.6 177 65.0
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 7.1e-58 229.6 273 49.5
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 8.6e-56 222.6 234 50.9
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 2.5e-55 221.1 313 43.5
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 1.2e-54 218.8 254 44.9
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 8.4e-51 206.1 403 36.7
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 5.4e-50 203.4 188 53.7
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 2.1e-49 201.4 119 74.8
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 2.7e-49 201.1 117 76.1
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 3.3e-31 141.0 166 50.6
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 7.6e-28 129.8 185 43.8
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 7.6e-28 129.8 185 43.8
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 1.8e-24 118.6 220 36.8


User provided reference genes

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