Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011149 Sechium edule HOM05D002873 ORTHO05D002978 3.6e-27 124.4 73 100.0
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 2.3e-13 78.6 72 63.9
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 3.9e-13 77.8 72 62.5
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 3.9e-13 77.8 72 62.5
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 6.6e-13 77.0 70 65.7
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 6.6e-13 77.0 70 65.7
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 6.6e-13 77.0 72 62.5
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 1.1e-12 76.3 72 61.1
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 3.3e-12 74.7 72 59.7
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 5.6e-12 73.9 72 61.1
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 9.5e-12 73.2 69 60.9
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 1.2e-11 72.8 72 58.3
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 2.8e-11 71.6 73 58.9
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 6.1e-11 70.5 66 63.6
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 1.0e-10 69.7 68 58.8
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 1.0e-10 69.7 73 56.2
Nitab4.5_0006524g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 1.4e-10 69.3 70 58.6
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 2.3e-10 68.6 72 58.3
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 4.0e-10 67.8 72 58.3
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 4.0e-10 67.8 69 59.4
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 5.2e-10 67.4 72 56.9
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 6.8e-10 67.0 72 52.8
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 6.8e-10 67.0 72 52.8
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 6.8e-10 67.0 72 52.8
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 6.8e-10 67.0 72 52.8
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 6.8e-10 67.0 72 52.8
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 6.8e-10 67.0 73 54.8
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 8.9e-10 66.6 72 55.6
Nitab4.5_0006224g0060 Nicotiana tabacum HOM05D002873 ORTHO05D002978 3.4e-09 64.7 70 58.6
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 4.4e-09 64.3 72 54.2
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 7.5e-09 63.5 73 52.1
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.3e-08 62.8 72 55.6
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 1.7e-08 62.4 73 50.7
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 2.2e-08 62.0 73 49.3
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 2.9e-08 61.6 69 53.6
BNapus_Darmor_BZH_scaffold_122p00010 Brassica napus HOM05D002873 ORTHO05D002978 3.7e-08 61.2 72 51.4
BNapus_Darmor_BZH_scaffold_99p00020 Brassica napus HOM05D002873 ORTHO05D002978 3.7e-08 61.2 72 51.4
BolC1t05900H Brassica oleracea HOM05D002873 ORTHO05D002978 3.7e-08 61.2 72 51.4
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 3.7e-08 61.2 72 58.3
AL3G11800 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 4.9e-08 60.8 72 48.6
Carub.0003s0158 Capsella rubella HOM05D002873 ORTHO05D002978 4.9e-08 60.8 72 48.6
Aqoxy6G02621 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 6.4e-08 60.5 73 50.7
BcaC09g47705 Brassica carinata HOM05D002873 ORTHO05D002978 8.3e-08 60.1 72 50.0
BNapus_Darmor_BZH_scaffold_208p00010 Brassica napus HOM05D002873 ORTHO05D002978 8.3e-08 60.1 72 50.0
BolC1t05901H Brassica oleracea HOM05D002873 ORTHO05D002978 8.3e-08 60.1 72 50.0
BraSC141t45633Z Brassica rapa HOM05D002873 ORTHO05D002978 8.3e-08 60.1 72 50.0
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 8.3e-08 60.1 72 52.8
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 1.1e-07 59.7 72 51.4
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.4e-07 59.3 73 47.9
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 1.4e-07 59.3 73 52.1
Dinv36852 Davidia involucrata HOM05D002873 ORTHO05D002978 1.9e-07 58.9 71 50.7
Aa31LG5G10000 Aethionema arabicum HOM05D002873 ORTHO05D002978 2.4e-07 58.5 71 46.5
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 2.4e-07 58.5 73 50.7
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 2.4e-07 58.5 73 47.9
Aqoxy6G00630 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 3.2e-07 58.2 73 50.7
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 4.1e-07 57.8 72 50.0
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 5.4e-07 57.4 73 49.3
CARHR288730 Cardamine hirsuta HOM05D002873 ORTHO05D002978 7.0e-07 57.0 67 52.2
Glyma.08G255700 Glycine max HOM05D002873 ORTHO05D002978 7.0e-07 57.0 68 48.5
MELO3C005501.2 Cucumis melo HOM05D002873 ORTHO05D002978 9.2e-07 56.6 72 58.3
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 9.2e-07 56.6 72 50.0
AT3G02480 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 1.2e-06 56.2 72 45.8
Hund13793 Selenicereus undatus HOM05D002873 ORTHO05D002978 1.2e-06 56.2 66 57.6
Sc11g0008060 Simmondsia chinensis HOM05D002873 ORTHO05D002978 1.2e-06 56.2 72 48.6
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 2.0e-06 55.5 73 49.3
Cpa.g.sc188.25 Carica papaya HOM05D002873 ORTHO05D002978 2.0e-06 55.5 69 49.3
Medtr7g018280 Medicago truncatula HOM05D002873 ORTHO05D002978 2.0e-06 55.5 98 40.8
Potri.017G108500 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.0e-06 55.5 90 42.2
Peaxi162Scf00479g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 4.6e-06 54.3 73 47.9
Phvul.004G047300 Phaseolus vulgaris HOM05D002873 ORTHO05D002978 4.6e-06 54.3 68 45.6
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 4.6e-06 54.3 73 47.9
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 6.0e-06 53.9 73 47.9
HanXRQChr14g0448071 Helianthus annuus HOM05D002873 ORTHO05D002978 7.8e-06 53.5 70 44.3


User provided reference genes

Program Settings