Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 3.9e-94 348.2 185 100.0
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 4.5e-66 255.0 184 74.5
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 3.5e-63 245.4 185 70.8
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 5.8e-58 228.0 178 71.9
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 2.6e-50 202.6 189 62.4
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 7.6e-50 201.1 190 63.2
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 7.2e-48 194.5 182 57.1
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 1.6e-47 193.4 193 53.9
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 2.3e-46 189.5 193 58.0
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 5.1e-46 188.3 193 57.5
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 8.7e-46 187.6 184 56.5
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.1e-45 187.2 184 59.2
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.9e-45 186.4 183 61.2
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 1.9e-45 186.4 191 56.5
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.3e-45 185.7 183 61.2
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 7.4e-45 184.5 188 55.9
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 7.4e-45 184.5 195 53.8
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 9.7e-45 184.1 173 59.0
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 1.6e-44 183.3 151 62.9
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 3.7e-44 182.2 184 58.7
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 4.8e-44 181.8 188 53.7
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 6.3e-44 181.4 187 55.1
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 8.2e-44 181.0 188 58.0
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 8.2e-44 181.0 188 58.0
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 8.2e-44 181.0 187 57.2
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.1e-43 180.6 187 59.4
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 1.1e-43 180.6 193 58.5
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 1.1e-43 180.6 191 55.0
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 1.8e-43 179.9 193 56.5
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 6.9e-43 177.9 151 61.6
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 6.9e-43 177.9 183 56.8
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 6.9e-43 177.9 200 51.0
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 9.1e-43 177.6 156 57.1
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 9.1e-43 177.6 193 52.8
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 1.2e-42 177.2 195 60.0
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 1.5e-42 176.8 190 53.2
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 1.5e-42 176.8 188 56.9
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 2.0e-42 176.4 180 57.2
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 2.0e-42 176.4 190 56.8
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 4.5e-42 175.3 187 50.3
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 4.5e-42 175.3 170 55.9
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 5.9e-42 174.9 181 57.5
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 5.9e-42 174.9 194 54.6
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 7.7e-42 174.5 191 56.0
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 1.3e-41 173.7 170 57.1
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 1.7e-41 173.3 169 56.8
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 1.7e-41 173.3 169 56.8
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 1.7e-41 173.3 169 56.8
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 1.7e-41 173.3 194 47.9
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 2.2e-41 172.9 139 61.9
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 2.2e-41 172.9 174 58.6
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 2.9e-41 172.6 195 56.4
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 2.9e-41 172.6 158 55.7
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 2.9e-41 172.6 179 54.2
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 5.0e-41 171.8 182 58.2
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 5.0e-41 171.8 188 58.5
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 1.1e-40 170.6 176 52.3
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 1.1e-40 170.6 181 54.7
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 1.4e-40 170.2 193 53.9
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 2.5e-40 169.5 159 59.7
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 2.5e-40 169.5 180 54.4
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 4.2e-40 168.7 185 48.6
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 5.5e-40 168.3 171 52.6
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 9.4e-40 167.5 184 57.6
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 1.2e-39 167.2 178 56.2
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 1.2e-39 167.2 195 50.8
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.6e-39 166.8 158 55.7
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 7.9e-39 164.5 127 64.6
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 1.4e-38 163.7 185 54.6
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 1.8e-38 163.3 186 53.8
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 1.8e-38 163.3 186 53.8
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.8e-38 163.3 186 50.5
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 1.8e-38 163.3 193 47.2
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 8.8e-38 161.0 187 54.0
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 1.1e-37 160.6 154 52.6
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 1.5e-37 160.2 128 60.9
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 2.0e-37 159.8 143 54.5
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 3.3e-37 159.1 116 69.0
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 4.4e-37 158.7 172 54.1
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 1.3e-36 157.1 127 62.2
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 3.7e-36 155.6 187 51.3
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 6.3e-36 154.8 179 53.6
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.4e-35 153.7 197 48.7
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 5.3e-35 151.8 176 50.0
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 5.3e-35 151.8 180 51.7
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 1.3e-33 147.1 191 49.7
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 3.8e-33 145.6 163 51.5
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 1.1e-32 144.1 109 68.8
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 9.4e-32 141.0 168 50.0
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 1.2e-31 140.6 87 74.7
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 1.2e-31 140.6 129 54.3
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 7.9e-31 137.9 151 51.7
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 7.9e-31 137.9 133 51.1
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 3.0e-30 136.0 87 70.1
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 3.0e-30 136.0 188 48.9
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 3.9e-30 135.6 143 51.0
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 1.4e-27 127.1 90 66.7
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 5.3e-27 125.2 144 49.3
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 8.5e-25 117.9 128 48.4
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 5.5e-24 115.2 142 52.8
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 1.4e-22 110.5 144 48.6
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 2.2e-20 103.2 137 52.6
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 3.1e-19 99.4 154 49.4
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 3.5e-18 95.9 126 48.4
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 5.0e-17 92.0 78 55.1
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 5.4e-11 72.0 116 37.9
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 1.3e-09 67.4 110 38.2


User provided reference genes

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