Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011112 Sechium edule HOM05D008339 ORTHO05D009712 7.3e-71 270.4 132 100.0
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 6.0e-57 224.2 156 74.4
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 1.2e-41 173.3 156 57.7
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.5e-36 156.4 154 54.5
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 6.5e-35 151.0 154 52.6
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.4e-34 149.8 154 51.9
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.6e-33 145.2 154 50.0
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 9.7e-31 137.1 154 48.7
MELO3C031306.2 Cucumis melo HOM05D008339 ORTHO05D009712 5.9e-28 127.9 139 48.9
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.8e-27 125.2 139 48.2
MELO3C004157.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.4e-26 123.2 136 50.0
MELO3C031309.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.9e-26 122.9 92 65.2
MELO3C031523.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.2e-26 122.1 95 64.2
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 2.7e-25 119.0 150 41.3
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 6.7e-24 114.4 150 40.0
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 1.1e-23 113.6 156 40.4
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 2.0e-23 112.8 149 40.9
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 1.3e-22 110.2 147 42.9
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 2.2e-22 109.4 146 41.1
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 2.8e-22 109.0 159 39.6
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 2.8e-22 109.0 152 40.1
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 6.3e-22 107.8 149 39.6
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 9.1e-21 104.0 92 53.3
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 1.2e-20 103.6 89 55.1
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 2.0e-20 102.8 153 39.2
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 2.0e-20 102.8 150 38.0
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 2.6e-20 102.4 138 39.9
Prupe.1G205300 Prunus persica HOM05D008339 ORTHO05D009712 7.7e-20 100.9 122 45.9
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 1.7e-19 99.8 148 39.2
MELO3C031308.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.9e-19 99.0 124 40.3
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 2.5e-18 95.9 153 36.6
PGR031G2810 Punica granatum HOM05D008339 ORTHO05D009712 2.5e-18 95.9 141 39.7
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 3.2e-18 95.5 155 36.1
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 1.6e-17 93.2 151 36.4
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 2.1e-17 92.8 149 38.3
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 3.6e-17 92.0 150 34.7
Sabra11G0113000 Salix brachista HOM05D008339 ORTHO05D009712 3.6e-17 92.0 92 48.9
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 4.7e-17 91.7 150 36.0
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 8.0e-17 90.9 149 38.3
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 3.9e-16 88.6 153 30.7
Ah.06g196240 Amaranthus hybridus HOM05D008339 ORTHO05D009712 8.8e-16 87.4 153 33.3
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.5e-15 86.7 151 34.4
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 2.0e-15 86.3 146 35.6
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.0e-15 86.3 146 35.6
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.6e-15 85.9 146 35.6
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 3.3e-15 85.5 146 35.6
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 3.7e-14 82.0 145 32.4
MELO3C004164.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.8e-14 81.6 128 40.6
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 6.3e-14 81.3 160 32.5
Sed0004364 Sechium edule HOM05D011459 ORTHO05D013640 2.4e-13 79.3 122 37.7
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 1.2e-12 77.0 144 29.2
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.2e-12 77.0 144 29.2
Sed0015156 Sechium edule HOM05D011459 ORTHO05D013640 1.0e-11 73.9 109 41.3
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 1.2e-09 67.0 154 29.9
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 1.2e-09 67.0 153 28.8
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 1.6e-09 66.6 155 27.7
C05p07380 Brassica napus HOM05D009911 ORTHO05D009712 1.6e-09 66.6 155 27.1
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 3.6e-09 65.5 157 28.7
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 3.6e-09 65.5 144 27.1
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 4.7e-09 65.1 155 26.5
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 2.3e-08 62.8 155 26.5
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 4.0e-08 62.0 152 26.3
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 5.2e-08 61.6 155 27.7
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 6.7e-08 61.2 155 25.8
BcaC05g24790 Brassica carinata HOM05D009911 ORTHO05D009712 6.7e-08 61.2 153 24.2
BolC5t29493H Brassica oleracea HOM05D009911 ORTHO05D009712 6.7e-08 61.2 153 24.2
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 8.8e-08 60.8 150 28.0
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 3.3e-07 58.9 154 25.3
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 9.7e-07 57.4 142 26.8
C05p07360 Brassica napus HOM05D009911 ORTHO05D009712 1.3e-06 57.0 146 22.6
BraA06t23818Z Brassica rapa HOM05D009911 ORTHO05D009712 2.8e-06 55.8 151 22.5
A06p06070 Brassica napus HOM05D009911 ORTHO05D009712 3.7e-06 55.5 151 22.5
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 6.3e-06 54.7 149 24.8


User provided reference genes

Program Settings