Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 3.9e-97 358.2 191 100.0
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 5.6e-64 248.1 203 69.5
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 4.8e-63 245.0 206 68.0
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 1.5e-53 213.4 182 66.5
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 7.4e-32 141.4 198 45.5
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 1.0e-25 120.9 200 40.0
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 6.7e-25 118.2 153 47.7
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 1.7e-23 113.6 202 44.1
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 1.7e-23 113.6 198 39.9
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 1.7e-23 113.6 198 41.9
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 1.4e-22 110.5 178 44.4
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 1.4e-22 110.5 198 40.9
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 3.1e-22 109.4 161 43.5
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 2.6e-21 106.3 171 40.9
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 5.9e-21 105.1 198 36.4
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 7.7e-21 104.8 184 45.1
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 3.8e-20 102.4 213 34.3
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 5.0e-20 102.1 193 38.3
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 6.5e-20 101.7 190 40.5
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 3.2e-19 99.4 206 38.8
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 4.2e-19 99.0 146 45.9
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 1.6e-18 97.1 172 37.8
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 2.1e-18 96.7 171 39.2
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 3.6e-18 95.9 187 39.0
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 1.5e-16 90.5 172 39.0
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 3.3e-16 89.4 162 37.7
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 3.3e-16 89.4 155 40.0
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 4.4e-16 89.0 158 36.7
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 5.7e-16 88.6 195 34.9
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 1.7e-15 87.0 154 39.6
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 3.7e-15 85.9 162 35.8
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 1.8e-14 83.6 151 39.1
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 2.4e-14 83.2 154 37.0
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 2.7e-13 79.7 169 34.3
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 3.5e-13 79.3 180 32.8
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 4.5e-13 79.0 140 40.0
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 7.7e-13 78.2 203 31.5
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 1.0e-12 77.8 151 35.8
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 1.9e-11 73.6 136 33.1
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 1.5e-08 63.9 200 26.5
SalBow6G1753 Salvia bowleyana HOM05D003014 ORTHO05D003233 5.7e-08 62.0 112 31.2
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 9.8e-08 61.2 106 42.5
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 3.7e-07 59.3 96 36.5
SalBow6G6778 Salvia bowleyana HOM05D003014 ORTHO05D003233 2.4e-06 56.6 110 30.9
Phvul.003G048100 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 4.1e-06 55.8 157 24.8
unitig_0.g90 Utricularia gibba HOM05D003014 ORTHO05D003233 4.1e-06 55.8 140 27.9
VMungo0251G1556 Vigna mungo HOM05D003014 ORTHO05D003233 4.1e-06 55.8 133 27.8
Phvul.003G048000 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 9.1e-06 54.7 153 24.2


User provided reference genes

Program Settings