Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 8.3e-114 413.7 204 100.0
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 8.3e-90 334.0 194 83.0
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 1.1e-76 290.4 194 74.7
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 3.0e-71 272.3 192 66.1
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.1e-70 270.4 192 66.1
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 1.9e-70 269.6 184 65.8
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 4.3e-70 268.5 192 65.1
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 4.8e-69 265.0 192 63.5
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 6.2e-69 264.6 192 64.6
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 6.9e-68 261.2 192 64.1
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 4.4e-67 258.5 191 65.4
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 4.4e-67 258.5 184 64.7
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 2.9e-66 255.8 200 59.5
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.9e-66 255.8 192 62.0
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 4.9e-66 255.0 192 62.0
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 4.9e-66 255.0 192 62.0
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 1.4e-65 253.4 183 64.5
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 1.9e-65 253.1 187 63.1
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 2.4e-65 252.7 200 62.0
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 4.2e-65 251.9 198 60.6
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 5.4e-65 251.5 183 62.8
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 1.6e-64 250.0 193 60.6
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 4.6e-64 248.4 182 64.3
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 4.6e-64 248.4 192 61.5
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 4.6e-64 248.4 195 63.6
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 6.0e-64 248.1 192 62.0
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.0e-63 247.3 193 59.6
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 1.3e-63 246.9 205 60.0
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 1.3e-63 246.9 192 61.5
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 1.7e-63 246.5 194 60.3
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 2.3e-63 246.1 192 61.5
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 3.9e-63 245.4 192 62.5
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 3.9e-63 245.4 192 62.0
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 1.9e-62 243.0 192 61.5
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 1.9e-62 243.0 196 59.7
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.5e-62 242.7 195 59.0
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 3.3e-62 242.3 192 60.9
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 5.6e-62 241.5 199 59.8
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.6e-61 240.0 194 57.7
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 1.6e-61 240.0 194 57.7
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 2.1e-61 239.6 195 60.5
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 2.1e-61 239.6 208 59.1
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 2.1e-61 239.6 222 54.1
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 2.8e-61 239.2 196 59.2
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 2.8e-61 239.2 200 61.0
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 4.8e-61 238.4 196 59.2
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 6.2e-61 238.0 195 60.0
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 8.1e-61 237.7 195 60.5
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.4e-60 236.9 195 57.9
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 3.1e-60 235.7 194 56.7
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 4.0e-60 235.3 128 84.4
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 4.0e-60 235.3 194 60.3
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 5.3e-60 235.0 195 59.0
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 9.0e-60 234.2 200 58.0
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 9.0e-60 234.2 192 58.9
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 1.2e-59 233.8 195 58.5
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 1.5e-59 233.4 192 58.3
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 2.6e-59 232.6 192 58.3
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 3.4e-59 232.3 197 57.9
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 4.5e-59 231.9 192 59.9
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 5.8e-59 231.5 193 59.1
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 1.3e-58 230.3 196 57.1
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 2.9e-58 229.2 192 59.4
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 3.8e-58 228.8 200 58.5
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 6.4e-58 228.0 197 57.9
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 6.4e-58 228.0 197 56.3
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 8.4e-58 227.6 174 62.1
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 8.4e-58 227.6 174 62.1
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 8.4e-58 227.6 192 57.3
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 1.9e-57 226.5 211 56.4
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 1.2e-56 223.8 174 60.9
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 6.0e-56 221.5 195 56.4
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.0e-55 220.7 193 57.0
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.0e-55 220.7 191 59.2
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 8.7e-55 217.6 200 56.0
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.5e-54 216.9 166 69.3
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.9e-54 216.5 192 55.2
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 3.3e-54 215.7 199 52.8
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 3.3e-54 215.7 179 58.1
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 9.6e-54 214.2 191 57.1
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 2.8e-53 212.6 193 53.9
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 6.2e-53 211.5 189 55.6
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 1.5e-51 206.8 196 55.6
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 8.4e-50 201.1 217 48.4
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 3.0e-47 192.6 134 63.4
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 5.7e-46 188.3 226 45.6
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 9.6e-46 187.6 169 50.9
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 4.8e-45 185.3 165 51.5
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 1.8e-44 183.3 174 52.3
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.5e-41 172.9 206 48.1
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 3.2e-41 172.6 201 46.8
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 5.5e-41 171.8 164 51.8
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 1.0e-39 167.5 206 49.0
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 9.0e-36 154.5 152 53.3
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 2.9e-34 149.4 164 48.8
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 3.1e-28 129.4 114 53.5
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 4.1e-28 129.0 124 48.4
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 2.6e-27 126.3 115 53.0
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 9.4e-25 117.9 101 54.5
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 1.4e-23 114.0 155 38.1
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 5.3e-20 102.1 189 32.3
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 1.2e-19 100.9 102 53.9
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 1.0e-18 97.8 59 64.4
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.5e-17 94.0 80 58.8
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 5.5e-17 92.0 66 60.6
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 8.8e-15 84.7 49 71.4
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 7.5e-14 81.6 93 51.6
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 8.5e-10 68.2 57 52.6
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 9.4e-09 64.7 54 53.7
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 1.6e-08 63.9 72 51.4
Glyma.05G224100 Glycine max HOM05D006529 ORTHO05D008380 6.8e-07 58.5 33 69.7
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 2.0e-06 57.0 45 62.2
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 2.6e-06 56.6 59 52.5
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 4.4e-06 55.8 102 35.3
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 9.8e-06 54.7 102 34.3


User provided reference genes

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