Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 3.8e-105 384.8 190 100.0
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 3.0e-94 348.6 186 90.3
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 1.3e-89 333.2 186 86.0
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 2.9e-89 332.0 186 85.5
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 5.6e-80 301.2 186 75.8
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 9.5e-80 300.4 184 77.7
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 3.6e-79 298.5 192 75.5
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 3.6e-79 298.5 193 75.6
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 8.1e-79 297.4 185 78.4
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 2.3e-78 295.8 186 75.3
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 4.0e-78 295.0 184 77.2
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 4.0e-78 295.0 194 74.7
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 5.2e-78 294.7 180 77.8
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 1.5e-77 293.1 186 75.3
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.5e-77 293.1 185 76.8
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 2.0e-77 292.7 186 76.9
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 2.6e-77 292.4 189 72.5
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 4.4e-77 291.6 186 76.9
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 5.8e-77 291.2 187 76.5
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 5.8e-77 291.2 186 72.6
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 7.5e-77 290.8 186 73.7
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 7.5e-77 290.8 185 76.2
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 1.3e-76 290.0 186 74.7
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 1.7e-76 289.7 188 75.0
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 2.2e-76 289.3 185 75.1
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 2.9e-76 288.9 186 72.6
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 3.7e-76 288.5 187 73.3
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 4.9e-76 288.1 184 73.9
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 4.1e-75 285.0 185 73.5
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 4.1e-75 285.0 185 73.5
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 5.4e-75 284.6 185 73.5
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.2e-74 283.5 186 72.0
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 2.1e-74 282.7 186 73.7
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 2.1e-74 282.7 181 72.9
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 2.7e-74 282.3 184 71.2
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 6.0e-74 281.2 186 73.1
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 6.0e-74 281.2 188 73.4
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 1.0e-73 280.4 190 70.0
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 1.0e-73 280.4 186 72.0
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 1.1e-72 276.9 186 69.9
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 1.1e-72 276.9 184 71.2
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 1.5e-72 276.6 183 71.6
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 1.5e-72 276.6 187 69.5
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.9e-72 276.2 186 70.4
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 1.9e-72 276.2 186 70.4
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 3.3e-72 275.4 186 69.9
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 3.3e-72 275.4 186 69.9
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 3.3e-72 275.4 189 71.4
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 7.3e-72 274.2 186 69.4
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 7.3e-72 274.2 190 68.4
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 7.3e-72 274.2 184 72.3
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 9.5e-72 273.9 189 72.5
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 9.5e-72 273.9 184 70.7
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.6e-71 273.1 189 72.5
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 6.2e-71 271.2 178 74.2
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 1.1e-70 270.4 197 65.0
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 1.4e-70 270.0 188 67.6
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 2.3e-70 269.2 197 65.0
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 3.1e-70 268.9 188 70.2
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 4.0e-70 268.5 186 68.8
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 5.2e-70 268.1 186 69.4
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 8.9e-70 267.3 186 69.9
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 1.2e-69 266.9 197 66.0
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 1.5e-69 266.5 192 66.7
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 2.6e-69 265.8 200 64.0
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 2.6e-69 265.8 186 66.7
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 3.4e-69 265.4 186 68.3
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 3.4e-69 265.4 193 65.8
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 3.4e-69 265.4 186 67.7
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.4e-69 265.4 191 68.1
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 5.8e-69 264.6 186 67.7
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 5.8e-69 264.6 199 63.3
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 9.9e-69 263.8 186 66.7
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 9.9e-69 263.8 188 66.5
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 1.3e-68 263.5 186 67.7
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 2.2e-68 262.7 186 67.2
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.9e-67 259.6 184 69.0
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 4.1e-67 258.5 197 65.5
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 7.1e-67 257.7 188 66.0
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 6.0e-66 254.6 186 63.4
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 3.0e-65 252.3 189 66.1
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.0e-65 252.3 190 66.8
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.0e-65 252.3 190 66.8
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 8.6e-65 250.8 177 62.7
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 3.3e-64 248.8 177 65.0
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 5.6e-64 248.1 200 65.0
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.8e-63 245.7 214 61.2
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 3.6e-63 245.4 258 51.9
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 8.4e-60 234.2 154 72.7
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 1.1e-59 233.8 153 73.2
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 1.2e-58 230.3 155 71.0
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 2.1e-55 219.5 159 67.9
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 2.8e-55 219.2 155 67.7
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.6e-55 218.8 153 68.6
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 2.4e-54 216.1 181 61.9
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 5.3e-54 214.9 155 69.0
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 9.0e-54 214.2 181 56.4
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 1.2e-53 213.8 153 68.6
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 1.7e-52 209.9 149 67.8
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 2.2e-52 209.5 170 62.4
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 2.9e-52 209.1 187 55.6
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 6.4e-52 208.0 177 55.9
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 9.3e-51 204.1 187 56.7
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 1.7e-49 199.9 157 65.0
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 1.7e-44 183.3 137 63.5
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 1.5e-40 170.2 190 50.5
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 7.4e-40 167.9 187 49.2
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.3e-36 157.1 188 44.1
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 9.3e-35 151.0 132 60.6
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 3.7e-31 139.0 182 45.1
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 5.3e-30 135.2 182 41.8
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 1.3e-28 130.6 77 77.9
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 5.5e-27 125.2 182 43.4
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 3.2e-19 99.4 56 76.8


User provided reference genes

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