Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 0.0e+00 1164.8 604 100.0
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 2.8e-274 948.3 580 81.4
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 1.9e-259 899.0 580 78.8
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 7.4e-219 764.2 435 85.3
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 2.0e-195 686.4 443 74.0
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 4.4e-195 685.3 445 73.3
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 1.1e-193 680.6 454 71.6
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 1.6e-192 676.8 444 72.7
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 4.5e-192 675.2 533 62.7
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 7.7e-192 674.5 441 73.9
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 7.2e-190 667.9 434 71.9
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 3.6e-189 665.6 447 69.8
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 6.7e-188 661.4 406 75.9
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.2e-186 656.4 445 69.9
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 2.0e-184 649.8 647 53.8
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 1.1e-182 644.0 408 73.0
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 4.2e-182 642.1 435 69.9
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 7.2e-182 641.3 449 68.2
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 4.0e-180 635.6 444 69.4
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 8.8e-180 634.4 470 64.9
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 2.6e-179 632.9 460 66.3
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 7.5e-179 631.3 481 64.0
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 9.8e-179 630.9 481 64.0
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 2.8e-178 629.4 640 51.9
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 2.8e-178 629.4 508 61.8
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.8e-178 628.6 643 52.6
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 4.8e-178 628.6 435 67.8
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 3.1e-177 625.9 588 56.3
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 5.4e-177 625.2 452 65.0
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 7.0e-177 624.8 496 62.5
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 9.1e-177 624.4 611 54.7
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 1.6e-176 623.6 601 55.6
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.6e-176 623.6 506 60.5
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 2.7e-176 622.9 408 72.3
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 5.9e-176 621.7 462 64.9
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 3.8e-175 619.0 433 68.6
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 5.0e-175 618.6 413 69.7
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.9e-174 616.7 410 70.5
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 9.5e-174 614.4 591 54.7
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 8.0e-173 611.3 604 53.8
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 5.2e-172 608.6 485 61.9
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 8.9e-172 607.8 478 62.1
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 1.5e-171 607.1 594 55.4
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.3e-170 604.0 408 70.6
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 1.3e-170 604.0 495 60.8
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 4.9e-170 602.1 492 60.8
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 6.3e-170 601.7 496 60.7
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 1.8e-169 600.1 464 62.5
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 3.5e-168 595.9 436 67.0
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 1.7e-167 593.6 406 69.0
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 1.7e-167 593.6 405 69.9
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 5.0e-167 592.0 469 62.0
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 2.5e-166 589.7 452 64.6
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 4.3e-166 589.0 446 63.5
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 6.1e-165 585.1 469 61.2
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 4.0e-164 582.4 406 68.5
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 4.9e-162 575.5 422 63.7
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 6.4e-162 575.1 644 49.4
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 9.2e-161 571.2 480 59.2
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 2.5e-158 563.1 500 56.6
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 2.5e-158 563.1 544 54.4
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 2.8e-157 559.7 409 64.1
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.3e-156 556.6 408 66.2
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.4e-153 547.4 466 58.8
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 1.7e-151 540.4 507 55.8
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 9.5e-150 534.6 407 62.2
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 1.5e-142 510.8 366 66.7
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 3.1e-132 476.5 381 61.2
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 2.6e-131 473.4 398 60.1
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 1.9e-113 414.1 287 67.2
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 3.9e-111 406.4 424 47.4
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.7e-104 383.6 457 48.1
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 2.3e-95 354.0 269 63.6
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 3.3e-86 323.6 282 58.5
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 4.4e-86 323.2 247 66.0
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 9.1e-84 315.5 358 46.4
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.1e-76 290.0 232 63.8
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 5.0e-74 283.1 194 70.6
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 2.9e-66 257.3 280 49.6
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 2.1e-56 224.6 187 59.4
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 2.3e-39 167.9 133 53.4
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 1.5e-38 165.2 150 60.0
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 6.6e-34 149.8 133 56.4
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.0e-26 125.9 498 25.5
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 1.3e-26 125.6 78 65.4
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 2.8e-24 117.9 183 41.5
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 4.2e-20 104.0 126 48.4
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 2.2e-13 81.6 49 69.4
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 2.9e-13 81.3 181 30.4
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 3.8e-13 80.9 73 50.7
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 5.4e-12 77.0 210 30.5
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 2.7e-11 74.7 194 30.9
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 5.1e-10 70.5 169 28.4
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 6.6e-10 70.1 57 59.6
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 1.4e-07 62.4 169 35.5
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 5.8e-06 57.0 58 48.3


User provided reference genes

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